KEGG   Tigriopus californicus (tidepool copepod): 131886301
Entry
131886301         CDS       T09700                                 
Name
(RefSeq) splicing factor 3A subunit 3-like
  KO
K12827  splicing factor 3A subunit 3
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131886301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tcf03041]
    131886301
Spliceosome [BR:tcf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    131886301
 Complex B
    131886301
 Complex C
   U2 SnRNP specific factors
    131886301
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 131886301
NCBI-ProteinID: XP_059090572
LinkDB
Position
9:15368728..15370837
AA seq 564 aa
MESLLEQQRRYHEERERLLDAMVGETLILQAGKVTPAPTATVAAHSALAQGLSAAGLGGA
SGGNANHTALGGGGGPSGHPQNARPLTHRETLNGEHRIRLMLDRQLECTRRLKEIYEDKD
GQRKDEVAALSGPHEFQEFYARFKQIKEFHRSHPGQISVPMSVEFEELKRTREHALEDPS
TNGWIEFSDEEGYGKFLDLHQVYELFVNLKGVERVDYMTYVMQFDRLFDIPKERKGAHYK
AYLHALLDYCHDYVRRAKPLLDVPREMASVRQEFEVKFAQGDFPGWSPEQPAGGGALATS
SAHLDLSAFSTWQELCPLGLNRLKSGLMALGLKCGGTLEERAQRLFATKGQTLDAIDPKL
KVKTQPKGQAAERAKALSKQREIAALEAQVYRFAELLSEQRAATQENVERKQARTDLERD
ESDEELSEEELEEDNDEDVIYNPKKLPLGWDGKPIPYWLYKLHGLNITYNCEICGNYPYK
GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAMSLWEKLKSQKQDEAWKPEHEE
EFEDSQGNVVNKKIYEDLKRQGLL
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggagtcgttgctcgagcaacaacgtcgctaccatgaggaacgcgagcgtcttttggac
gccatggtgggcgagacacttatcctgcaagccggtaaagtcacacccgcgcccactgcc
acggtggccgcccattcagccttggctcaaggcctgagcgcggccggtctgggcggcgcc
agcggcggcaatgccaatcacacggccttgggcggcgggggtgggcctagtggccatccg
cagaacgcccgcccgttaacgcatcgcgagacgttgaacggcgagcaccggatccgcctg
atgctggaccgccaattggaatgtacccgccgtctcaaggagatctacgaagacaaagac
ggccaacgcaaagacgaggtggccgcattgtccggcccgcacgagttccaggagttctac
gcccgcttcaaacaaatcaaagaattccaccgctcgcatccgggccagatctccgtgccc
atgtcggtcgagttcgaggagttgaagcggacccgcgaacacgccctggaggaccccagc
accaatggctggatcgaattctccgacgaagagggctacggcaagttcctggacctccac
caggtgtacgagctctttgtcaatttgaagggcgtcgagcgcgtggattacatgacctac
gtgatgcaattcgatcgcttgttcgacatccccaaggagcgcaagggcgcccactataag
gcctatttgcacgccttgctcgattactgccacgattatgtgcggcgggccaaacctctg
ttggacgtgccgcgtgaaatggccagtgttcgccaagagttcgaggtgaaattcgctcag
ggcgactttccgggttggtcgcccgaacaacccgccggcggtggcgccttggccacctcc
agcgcccatctcgatctctcggccttctccacctggcaggagttgtgtcctttgggcttg
aaccgtctcaagtccggcctcatggccttgggtctgaagtgcggtggcacgctcgaggag
cgcgctcagcgtctcttcgccaccaagggccaaaccctggacgccatcgaccccaagctc
aaggtcaaaacccagcccaaaggccaagccgccgagcgggccaaggcgttgagcaaacaa
cgggaaattgcggccctcgaggcccaagtgtatcgcttcgccgagttgctctcggaacaa
cgggcggccactcaggagaatgtggaacgcaaacaagcccgcaccgatttggagcgcgac
gagtcggacgaggagttgtccgaagaggagctcgaggaggacaacgacgaggatgtcatc
tacaaccccaagaagctgcccctgggttgggacggcaagcccattccgtattggttgtac
aaactccacggactgaatatcacctacaattgcgagatttgcggtaactatccctacaaa
ggccccaaggccttccaacggcatttcgccgagtggcgccacgcccacggcatgcgctgc
ttgggcattcccaacacggcgcactttgctaatgtcacgcagatcgaagacgccatgtcg
ttgtgggagaagctcaagtctcagaagcaggacgaggcctggaaacccgagcacgaagaa
gagttcgaggactcccaagggaacgtggtcaacaagaagatttacgaggacctcaaacga
cagggacttttgtga

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