Tigriopus californicus (tidepool copepod): 131888393
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Entry
131888393 CDS
T09700
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54-like
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcf03016
]
131888393
Transfer RNA biogenesis [BR:
tcf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
131888393
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
131888393
NCBI-ProteinID:
XP_059093221
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All DBs
Position
10:complement(6291391..6292792)
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AA seq
440 aa
AA seq
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MSVGYAVPINGQEPGAVLWVIGMSAERRLSPATLVAVAMKRLVAHPEARVQTRGQMSQGI
WHRERSQVRVTQARGKYWPVVGHQIEGQTYLYPEEALFLLEIQQLQVLDAEVPMSVQKAF
TVMLTHERAVLRYRVYSHLTRLGYKLIRHQPRPSSQPRKRGPTTSPVVGPEAIHAPIKRS
KSHALDAPSRLVVPVAETRLLPAGAWPARTRYDVVFQPRPPDGQAEPQSAEPWDLSQISS
WSEWKKNRSRMGPINLPSVQEIRVDCETSGRGFYPLDFWSSSVSPAEEKISITRSVADDT
SSARSLASGALRTLWMGPVKPMIPARSVHSTRHILELIRIPNRKCNIRDETLIDDRLEAF
KIDFDIFLPNVSFKKSRPGLPNFRVIVTSSDESVPKSQSLQSLKESLADSVPLLMGVVGP
GNISFFALQDTSLPRIISVG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaggatatgcggttccaattaatggtcaggaacctggggcagtcttgtgggtc
atcggtatgtcggctgagcgccggctgagtccagccacgctggtggcggtggccatgaaa
cgcctagtggcccaccctgaggctcgggttcagactcggggtcaaatgtcccaggggatt
tggcatcgagagcggtcccaggtcagggtaacgcaagctcggggcaagtattggccagtt
gtgggacatcagatcgaaggccaaacctatttgtatccggaggaggcactctttttactc
gagatccaacaacttcaagtcttggatgccgaggtgcctatgtccgtgcaaaaggccttc
acggtcatgttgacccatgagcgagcggtcttgagatatcgcgtgtattctcatttgact
cggttaggctataaattgattcgacatcaacctcgtcccagctcacagcccagaaagcgt
gggcccaccaccagtccggtggtgggccccgaggccatccacgcccccatcaaaaggtcc
aaaagccatgctctggacgcgccctcacggctcgtggtacccgtggccgagacgaggtta
ttgccggcgggagcttggccggctcggacccgctacgatgtggtttttcagccacgacca
cccgatggccaggctgaaccccaatctgcggaaccgtgggacttgtcccagatttccagt
tggtctgaatggaagaaaaacaggtccagaatgggccccattaacttacccagtgtgcaa
gaaataagagtcgactgtgaaacatcgggtcgaggattttatcctctggatttctggtcc
agctccgtcagtccggccgaagagaaaatcagtattacgcggagtgtggctgatgatact
agttcggcccggtctttggcatccggagcattacggacattgtggatgggtccggtcaag
ccgatgattccggcccgatctgttcattcaactcgccacattctcgaattgattcggatt
cccaatcgaaaatgtaatattcgggacgaaactttgatcgatgacagactcgaggccttc
aagattgactttgacatatttctccctaatgtcagttttaagaaaagccgtccgggtttg
cccaatttccgtgttattgtgacatcaagtgatgaaagtgtgccaaaatcccaaagtctt
cagagtctaaaagaatctctggccgactcagtgccattgttaatgggcgttgtagggcct
ggtaatatttcattttttgccttacaagacacgtctcttccgagaataatctctgtgggc
taa
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