Tigriopus californicus (tidepool copepod): 131889326
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Entry
131889326 CDS
T09700
Name
(RefSeq) sodium channel protein para-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131889326
Ion channels [BR:
tcf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
131889326
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
131889326
NCBI-ProteinID:
XP_059094395
LinkDB
All DBs
Position
10:complement(13111642..13143387)
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AA seq
2214 aa
AA seq
DB search
MSDNHGENDSDNGPPIFRPFTREELAAIEDTIYQKKMAAKKRAERKAANIAKYGDNARAR
KLYDHDSDDDDDDDDDLEPNPKLEPGNDLPRRYGEFPLEFASTPICDIDPYFYDKKTFIV
ISKGGTIYRFSADKALYLLSPFHPIRRIAIHVLTHPMFSFFIICTILVNCYVMVKPDTEY
TSSTEVIFTAIYTYESAVKLLARGFLLDDYTYLRDAWNWLDFSVIGMSYVTIAIDLGSFS
ALRTFRVFRALKSVAVIPGLKTIVSAIIYSVKNLRDVIILTIFTLAVFALLGLQVYMGVL
SQKCVYSYPFNNSDLLEQWGNITDDSWNKWVNNETAWYVNPDTDNFIMCGNSSGAGKCPE
GTVCLVGVGPNPNYGYTNFDSFGWAYLCAFRLMTQDFWENLYQITLRTAGPWHIVFFMVN
IFLGSFYLINLILAIVAMSYDELQRQAEEEAQRELEELEAIKEAEEAALAEAEAAAAEAA
EAMEGLFGGGPIGGDLGDPGGGSPDSEDPSGGHVIDVVAAAGSSLSPSRESMSSTMAKYA
VARDPSARSDMFRSYDTGVDHPQGNGHPILPSSSDIDNQDRISVQSAIVYRSIDSLAGKG
SLAGVTSGSCAAGGASVGPAASSGKLTSLPASPFVRRASKSNSFSSHVRLHEKYGNSKKP
LVLLTYLDAQEHLPYADDSTAVTPKSELNGLIVVDTPTRMNLARKFSYTSHTGKVDSYTS
HTDLQYHPSGNGAASNTKENTLRKRMASLFSDMGQTHPSNKPSTPNSILMEPMSSNPYGP
LGSCHSPKSGPSLGGFGANGKDSVDLQDVIVLNNIIDQVSERPMSKTTGFGAYMDDDDDD
DDEGPKFKEICAEYTKKSINVACIWDCCWLWLRVSEVMAYLVFDPFTELFITLCIVVNVV
FMALDQYNIEYDWNGGMSPLLSNMLTTGNYFFTAIFALESFVKLASMSPRYFFMDGWNCF
DFLIVILSLVELLAEGIKGLSMLRSFRLLRVFKLAKSWKSLNDILTIMANTVGALSNLTF
VLCIIIFIFAVMGMQLFGKDYVENVCTKWDCEMPRWNFIDFMHSFMIVFRVLCGEWIESM
WDCLWVAGPSCVPYFLATVLVGNLVILNLFLALLLSSFSDMGGGAEEEEGEPDKMAIAFG
RFGRLKRWISGSIATLFRYLKNGRVRSGGSEDGRDPDIALEITEEKDFAGENGDLKNRGL
KVDINHVSIPLGEKSNADFPDSSIGEGMDITIQGANGHVKLKTDAASIRSYTTSEKELNA
STNGGVKVDNLALPNIDDKLGYSSDMSIGRGMDISIRGEGNDNENKEFFDDENNWEVNHN
GSLNYGSHDNINKYDTNSEKHALEDQITYDDEISIKHVPEPIVDPIDEVEVVECCPDICY
RICPCCIGDPDSPFWQLWYRHRLQVSRLIENKYFETVVLALILLSSFVMTLEDIWFDTKP
LLVDTLYYLDRILTVVFFLETTLKLFAMGCVMYFGNAWCWLDFVIVAVSLVNFGASLLGA
GNIPIFKTMRTLRALRPLRAMAKMEGMKVVVNALVGALPSIFNVLLVCLIFWLIFAIIGV
NMLMGKYYKCVDEATGEKFSHEVIPNKTVCYTEKGAVWVNSRITFDNVFIAYLSLLQVAT
FKGWLDIMNDAIDSVGIGEQPHREVNIYMYLYFVFFIVFGSFFTLNLLVGVIIDKFNEQK
NKGGSSLDAFMTEDQKKYIAAMKKASTKKPMKALPRPTWRPQAIVFAIVTNKKFDMIIMG
FIGLNMLTMMCDHYHQSSGWTFALDNLNLSFIVIFTSEMCLKMFALRHFYFAEPWNLFDF
VVVLLSLAGLFLSDLIEKYFVSPTLLRVVRVAKVGRVLRLIKGAKGIRTLLFSLVMAFPA
LVNICLLLFLVMFIFAVFGMSLFKNVKIRPGFDDVHNFQTFGKTFTLLFQMCTSAGWSDA
LMAITNDKNCDPPNEETGYSGNCGSNMAGVAFMTLYLVLSFLIIVNMYIAVILENYSQAT
EDVQEGITDEDYDLFYEIWQEFDPGGTQYMPYKSLSEFLEVLEPPLQIPKPNKFKIIHMD
IPIVRYTNAEGEVLDNMVFCADILDALTQDFFARKGNPIEEPPHVDEIKVTTFADRPGYQ
RISSTLWKQREDYCASLIQKAWKFHKLRNTESHTEEPHTDDEMSQLSDLTNRDSTSQPII
GPPSTVVKLPALDKKHLIEVRSAGKLGDQDEDDSSDIASASATAPARSKDKKKS
NT seq
6645 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataatcacggcgagaatgattccgacaatgggccgcccattttcagacccttc
acccgggaagaattggccgccatcgaggacaccatctaccagaagaagatggcggccaag
aagcgggcggagcgaaaggccgccaatattgcgaaatatggagataacgcccgagcccgc
aagctctatgatcatgattctgacgatgatgacgatgacgacgatgatctggagccgaat
ccaaagctggagccaggtaatgaccttcctcgacgctatggcgagttccccttggagttt
gccagcactcccatttgcgatatcgatccgtacttctacgacaagaagacgttcattgtc
atatccaaaggaggcacgatctatcggttctccgcggacaaggctctctatttactctct
ccattccatcccattcggcggattgccattcatgtcctcactcatcccatgttttccttc
ttcatcatttgtaccatcctcgtcaattgttacgtcatggtcaagcccgacacagaatat
acatcttcgacagaagtgatattcactgccatctacacgtacgaatctgcggtcaagctg
ttagcccgtggtttcctccttgatgattacacatatttgcgggatgcctggaactggctg
gacttctccgtgataggaatgtcctatgtgaccattgccatcgatctaggcagtttttcg
gcgctcaggacgttccgtgtgtttcgagccttgaaatccgtggctgtgatacccggtttg
aagactatcgttagtgcaattatctattccgtcaagaacctcagagatgtgataatcctg
accattttcaccttggccgtgtttgcccttctgggcctccaggtgtatatgggtgtgctc
tctcagaaatgtgtttacagctatccgttcaataacagcgaccttctcgagcagtggggt
aacatcacagatgactcgtggaacaagtgggtcaacaacgagacggcctggtacgtgaac
ccggatacagacaacttcatcatgtgtgggaactcttccggggcaggcaagtgtccggaa
ggcactgtatgtctagtgggcgtaggtccgaacccaaattatggctacaccaactttgat
agctttgggtgggcctacttgtgtgcctttcgcctcatgacccaggatttctgggagaat
ctctatcaaatcaccctccgcacggcaggcccttggcacattgtctttttcatggtaaac
atttttctgggctccttctacctaatcaacttgatcttggccattgtcgccatgtcctat
gacgagttgcaacgccaagctgaagaggaagctcaaagggaactcgaagagctggaagcc
atcaaagaagccgaggaagcagccttggctgaggccgaagccgctgcagccgaggctgcc
gaggccatggagggtctctttgggggtggtcctataggcggggacctgggagacccaggg
ggaggctcacccgattcggaagacccaagtggaggtcatgtgattgatgtggtggctgcg
gctggttcttccttgtcaccaagtcgagaatccatgtcttcaacgatggccaagtatgca
gtggctcgtgatcccagcgctcgcagcgatatgtttcgaagctatgataccggtgtggac
catcctcagggcaatggtcacccaatccttccctcctcaagcgatatcgacaatcaggac
cgcatcagtgtccaatcagctatcgtataccgttccatcgacagtctggccgggaaaggc
agtctggcaggcgtcaccagtggaagttgcgccgcaggcggcgcctctgttggtccggca
gcctcctcagggaaactgaccagtctcccagcctcccctttcgtccgacgagcctccaaa
agtaattccttcagttcccatgtgcgacttcacgaaaaatatggcaactccaaaaagcca
cttgtcctccttacctaccttgatgctcaggagcacctgccttatgctgatgactcaact
gccgtcacgcccaaatctgaactcaatggcctcatcgtggtggacacgccgacccggatg
aatctggccaggaagttctcgtacacctctcacacgggcaaggtggactcctacacctct
cacaccgacttacagtatcacccgtccggaaatggggctgcctccaataccaaggaaaac
acgctgcgcaagcgcatggcctcactattctcagatatgggtcagacacacccatccaac
aagccatccactcccaactccatcctcatggaacccatgtcgtccaacccgtatggcccc
ctcgggtcctgccacagcccaaagagcgggcccagtctgggaggctttggtgccaacgga
aaagactccgtcgaccttcaggatgtgatagttctcaacaatataattgatcaagtcagt
gaacgtcccatgagcaagaccactggttttggcgcttacatggacgatgatgacgacgat
gatgacgaaggtccgaaattcaaagagatctgcgccgaatacacaaagaagagcatcaat
gtggcttgcatctgggattgttgttggctttggcttcgggtatcggaagtgatggcctac
ttggtctttgatcccttcaccgaactcttcatcaccctctgcattgtggtcaatgtcgtc
ttcatggctttggaccaatacaatatcgaatatgactggaatgggggcatgtctccgttg
ctgtccaacatgctcaccactggtaattatttcttcacggccattttcgctctggagtcg
ttcgtcaagttggcctcaatgagcccaagatacttcttcatggatggatggaactgtttc
gatttcctcattgtgatcctctccctggtggagctattggccgaagggatcaaagggctg
tccatgttgcgatcgttccgtctgctccgcgtgtttaagttagccaagtcctggaagtcc
cttaacgatatcctcaccatcatggcgaacacggtgggcgctctctcgaacctgacgttt
gtcctttgcatcatcatcttcatctttgccgtcatggggatgcaactctttggcaaagat
tacgtggagaacgtgtgcacgaaatgggattgtgaaatgccgcgatggaacttcatcgac
ttcatgcacagcttcatgattgtgttcagggtgctttgtggagaatggatcgagtccatg
tgggactgtctgtgggtggcgggtccatcgtgtgtgccttatttcttggccacggttctg
gtgggcaatctcgtcattctcaacttgttcttggccttgttgctcagtagtttctcagac
atgggaggtggagctgaggaagaggaaggagaaccggacaagatggccattgctttcgga
cgcttcggtcgactaaagaggtggatcagtgggtcaattgcaaccttatttcgctacctt
aaaaacggacgtgttcgctctggcggaagtgaagacgggcgcgatccagacatcgctctg
gaaataaccgaagagaaggacttcgcaggcgaaaatggagacctgaagaatcgcggcctc
aaagtggacatcaatcatgtgagcattccattaggcgagaagagcaacgccgactttccg
gatagttcgataggcgagggcatggatatcacgatccagggagccaatggacacgtcaaa
ctcaagaccgacgctgccagtatacgctcgtacacaacttccgagaaggaactcaatgcc
agcaccaacggcggggtcaaggtcgacaacttggctttgcccaatatcgacgataaactc
ggctattcctccgacatgagcattggccgtggaatggacatttccatccgaggcgaaggc
aacgacaacgagaacaaggagttcttcgacgacgaaaacaattgggaggtgaaccacaac
ggcagcctcaactacggaagtcatgataacatcaataaatacgacaccaactcggagaaa
cacgctctcgaggaccagatcacatacgacgacgagatttccattaaacatgtcccagag
cccatagttgatccgattgacgaggtcgaggtggtggaatgttgtccagacatttgctat
cggatctgtccttgttgcattggcgatccagactcacccttttggcaattatggtatcgc
cataggctccaagtgtcaagattgatcgagaacaaatacttcgagaccgtggttctggcg
ctcatcttgctgagtagcttcgtgatgaccttggaggacatctggttcgataccaagcct
ctgctggtggacactctctactacctggacaggatcctcactgtcgtgttcttcctcgaa
accacgctcaaactgttcgccatggggtgtgtcatgtactttggcaacgcctggtgttgg
ctcgactttgtgattgtggctgtgtccctggtgaacttcggagccagccttttaggagcg
ggtaacattcccattttcaagactatgagaaccctgcgtgccttacgtccccttcgtgcc
atggccaaaatggagggcatgaaagtggtagtcaatgccctggtcggggctcttccatcc
atcttcaatgtgttgctcgtttgtttgatcttctggttaatatttgccatcatcggggtc
aacatgctcatgggaaagtattacaaatgcgtggacgaggccaccggtgaaaaattcagt
cacgaggtcattcccaacaagaccgtgtgctacacggagaaaggagccgtttgggtcaac
tcgaggatcactttcgacaacgtcttcattgcctacttgtccttgctccaagtggccact
ttcaaaggctggctggacatcatgaacgatgccattgattccgtgggtattggcgaacag
ccccatcgggaggtcaacatctacatgtacctctactttgtgttcttcatcgttttcggc
agcttcttcaccttgaatcttttggtgggtgtgatcattgacaaattcaacgagcaaaag
aacaagggcgggagctccctagacgcgttcatgactgaagatcaaaagaagtacattgct
gcgatgaagaaggcatcaacgaaaaagccaatgaaggctcttcccagaccaacctggcgt
cctcaggccattgttttcgccattgtcacaaataagaagtttgacatgatcattatgggc
ttcatcggtttgaacatgttaacaatgatgtgcgaccactatcatcagagctcgggttgg
acattcgccttggacaatctcaatctatccttcatcgtcatcttcacctcggagatgtgc
ctcaagatgttcgctctccgtcacttctactttgcagaaccgtggaacctgttcgatttc
gtcgtggtcctcctctctttggcgggcctgttcttaagtgaccttattgagaagtacttc
gtctctcctacgctcctccgcgtagttcgtgtggccaaagtaggcagagtcttgcgtcta
atcaagggtgcgaaaggcattcggacgttgctgttctccctggtgatggcctttccggcc
ttggttaacatctgcttgcttctcttcctggtcatgttcatctttgctgtgttcggcatg
tccctattcaaaaacgtcaagatccgcccaggattcgacgacgttcataacttccaaacc
tttggcaagacattcacactcttatttcagatgtgcacgtcagcaggatggtcagatgct
ctcatggccatcacgaatgacaagaactgtgatccacccaacgaggagaccggttactcg
gggaactgtggcagcaacatggctggcgtggccttcatgactttgtacctcgtgcttagt
tttctcatcattgtcaacatgtacattgctgtgatcctcgaaaactactcccaagccacc
gaggacgttcaagagggtatcaccgacgaggattacgatctgttctacgagatctggcag
gagtttgatcctggcggtactcagtacatgccgtacaaatcactctctgaattcctcgag
gtcttagagccccctcttcagatccccaagccgaataagttcaagatcatccatatggac
attccaatagtccgatatacgaatgcagagggcgaagtcctggataacatggtgttttgc
gcagacattctggacgcccttactcaagacttctttgctcggaagggcaatcccatcgag
gagcctccgcacgttgatgaaatcaaggtgaccactttcgctgaccgccctggttaccaa
aggatctcgtccaccctttggaagcaacgtgaggattattgcgcctcgctcattcagaag
gcttggaaattccacaagcttcgcaacacggaaagccacacagaggaacctcacaccgac
gacgagatgagccagttgagtgatctgaccaatcgcgactccacgagtcagcccataatt
ggtccaccttccacagtggtgaagctacccgctttggacaagaaacatttaatcgaggtc
cgaagtgcagggaaattgggcgatcaagacgaggacgacagtagtgatattgcgagtgcg
tctgcaaccgctccggcacgctccaaagacaagaagaagtcttga
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