Tigriopus californicus (tidepool copepod): 131889921
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Entry
131889921 CDS
T09700
Name
(RefSeq) LOW QUALITY PROTEIN: talin-1-like
KO
K06271
talin
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131889921
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131889921
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131889921
Exosomal proteins of other cancer cells
131889921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
Talin_R4
I_LWEQ
Talin_middle
IRS
FERM_M
Talin_VBS2
VBS
FERM_f0
FERM_N
RA_2
Vinculin
ACBP
GIT1_C
Motif
Other DBs
NCBI-GeneID:
131889921
NCBI-ProteinID:
XP_059095133
LinkDB
All DBs
Position
1:12065458..12091229
Genome browser
AA seq
2683 aa
AA seq
DB search
MDSTPSTVPRFFEAINMAELKLRIAIVEKNERGQEVELVRKTIPFHPQALVLDACAQIRE
RVAEIKNLGNPNQYGLFLQDEDPKKGVWLEPEKALEHYLLRDNDHLEYRRKMRLLKVRML
DGTVKSVMVDDSQNVGNLMVLICTKIGITNHDEYSLVWDKPDENQEAIPTNKFGTLGGTM
TLRKKYKEGEKEIDPKMEELKRQLNTEDGVNWVSHGSTLREQGIGEAEVLLLKRKYFYSD
ANIDSRDPVQLNLLYQQAKEAILDGTHPVRMDDAVQFAALQAQIQYGDHKEQSHKPGLFD
LREFLPQSYMKANKIEKKIFQEHKKLFGVSDIDAKVKYVKLARGLPTFGVHFFLVKEKMR
GRNRLVPRLLGVTKDSVLRLDEKTKEILKTWPLTTVRRWAASPNVFTLDFGDYQDQYYSV
QTSEGEQISQLIAGYIDIILKRRQRREHIGDDGNEEEAMEEELVTPGRAITMVGLPGTNY
KKAEQSNLAQPGVLRNSGAARHPFRTGQGRCHEIQLSGPQRALVSTISHGQESINRAEGF
LNQKATLPSLGNDPASYRWKETQKTTNKQTIHSQVSAMNAATAQMVTLTGQGDETDHNAV
GAAVNMISNNLPEMAKGVQMLAALMDDEGANGDDLMGAARNLCTAFTDLLAATEPQSREP
RQHMLTAASQVGSASHRVLYTIGEEEVADKERQDILLGLAKAVANTTAALVLKAKNVASK
CPNQTTQNRVIGAATQCALGTSQLVACAKVVAPTISDPMCQEQLVEAAKEVAKSVQGCVS
TCNDVSHDNQSLRELGKSAEDVTRALNELLNHVKDGHSDKIPDIMEQIMCASGELIASYD
SSEMVRQARILAQSTAELIQAIRGEAEAQSDSDLQKRLLSAAKDLADATSQMVEAAKLCA
SRPNDRESQEALKRAAEHLRTTTQNAVGTTIKRKMIKRLENAAKHSAATATQCIAASQGV
GAHNTNSISQEELMESCKGVADVIPRLVEGVKMSMQNPDSAMAQLNLINNAEQFMMPSSR
LLMSTRSTLPTVSNQAAQLQLSNSSKQMDNALRELRSCIGKAHQVCAALEIEASADLIDS
LQQEIEEFRSSAATFNLKPMPGETLESATLLLNTTSKSVSSTVAQLITAASEGNEDITNR
AARDTANALRDYTAAIRGVAANSKDRSYQTRILDQAQLVMSKSARLVLEAQRSMQNPADP
HCERKLSDAGQEVNIALSGTMSCLPGQQEVEQTMSEISSWSQQLEGESFRSSGRPYGELQ
NQLTFAADKLSDATSDVVHSAPRPDELAHTSRHFGEVLGEMMEYSMDMAGQTKVSEHRSN
MVTTMKSVTSSSSTLLSSAKTVAADPSAPSAKGNLANAAISVTESINNLINVYTSAAPGQ
KECDNAIRAIQSSRHILENANQPISDASYYECLDVVMEKSKALGDCMTGIANHAKKSEHE
EFGEAVHGVSDAICGLVEAASQSAYLVGVSDPSSVGGRHGIVDQNQFMRAYQAIKIACQN
LVNPSSGQHQILSSATVIAKHTSALCNSCRIASSKTDNPVAKRQFVQSAKDVANATASLV
KEIKKLDSNYNDSNRQSCSAATRPLLDAVEKLCQFANSPDYASVPARISREGQMAQEPIL
NSGSFIIEGSCAMIQSAKSLAVNPRDPPTWQSLANSSKSVSDSIKNLVASIRDKAPGQRE
CDEAIEKLTINIRELDQASLAAINQNLAPKTDKDIKQFTEQMENAATQISQKLPDVQMSA
KSEAERLGHMVTAMVSYFDPLVANAIGSASNMVSSKQQVLVLDQTKTVAECAQQLLYAAK
ESGGNPKATHVHGDIDESADAMSTSIQELIGSIEKLAPNLGVVSKLVSCITEAIFTVDDY
RNVDVSVSGPGRGRGEQSFVSLQSTMMSSTKEIARTAQEIVMKSSSDPGQLGNLASHISV
CYQELARDTKGTCSGASNMEVGQRIRSAVQELGQSTIDLVKATGNCQLTPNDSFALXDIS
ENARSVGEKCSNVLAALNAANTGTHALENAANTVSGIIGDLETTIMFATAGTLNADDGDD
AFADHRENILKTAKALVEDTKTLVAGAASSQEQLAVAAQNAVTTIVQLSEVVKAGAASLG
SPNREAQVMLINAVKDVASALGDLMQSTKAASGKSIQDPAMHQLKDSAKIMVTNVTSLLK
TVKAVEDEHSRGTRALESSIEAIAQEIRAFDLPEPPKSRAEPEDLIRATRPITLATGKAV
SAGKSCKQEDIIVAANMGRKAVSDMLTTCKAAAFHSQKSQARSQALHSGHDVAVQYRELL
QMVMHNVNKPGSSESRTNLGNISRKIAQCVTELAAAAEMLKDDDWVDPSDPTFIAENELL
GAAKSIENAAKKLASLKPRREIKGKEVDANMNFDELILDAAKSIASATAALIKAASEAQR
ELVRQGKVQKTSHLNSEDGQWSEGLVSAARLVAAATHNLCEAANALVKGHSSEEKLIGAA
KQVAGSTAQLLLACKVKADPESASMRRLEAASNAVRKATDNLVKAAQQALEQEEENADVD
LNKSAVNTVVEEINARSEVLRMERELEQARGRLEKLHQRRYQTDSETEHSGYESSSYDLT
PSQGRKLFTTPHDKSQYHQKTLFAYSDRSGDESAFDSGPSFNESLQRFRTGATATADGSG
SNSSTYKYSSSSRQTSKSSNVTRSVEEQQTVITRNSQKSYHIE
NT seq
8052 nt
NT seq
+upstream
nt +downstream
nt
atggactcgactccttcaactgttcccagattctttgaagcaatcaacatggccgagttg
aaactcagaatcgccattgtcgagaaaaatgagcgtgggcaagaggtggaactggtccgg
aaaaccatcccctttcaccctcaggcccttgttttggacgcatgcgctcagattcgtgaa
agagtggcggaaatcaagaaccttggtaatcccaatcagtatggattatttcttcaagat
gaggacccaaagaaaggagtctggttggagcccgagaaagccctagaacattatcttctt
cgcgacaatgaccacttggaatatcgccgcaaaatgcggctcctcaaagtccgcatgctg
gacggtacggtgaaatctgtaatggtggacgattcccaaaatgtgggtaacctcatggtt
cttatttgcaccaaaattgggatcaccaaccatgacgaatactccttggtttgggataag
cctgatgagaatcaagaagctattcccaccaataaatttggaaccttgggcggaaccatg
actcttcgaaagaaatacaaagagggcgaaaaagaaatcgaccctaaaatggaagagttg
aagcgtcaactgaacaccgaggatggagttaactgggtgtctcatggaagcacactgagg
gaacaaggtattggcgaagctgaagttctcctcctgaagaggaagtacttctactcggac
gctaacatcgactctcgagatcccgtccaactcaatctactctaccaacaagccaaagaa
gctatcttagatggaacccatcccgttcgcatggacgacgcggtccaatttgccgctctt
caggctcagatccaatacggagatcacaaggaacaaagtcacaagcctggcttattcgat
ttgagagagttcctgcctcaatcgtacatgaaggccaacaagatcgagaagaagatcttc
caagagcacaagaagctctttggtgtctccgatatcgacgccaaagtcaagtacgtcaag
ttggcccgtggactcccaacattcggcgttcacttcttcctggttaaggaaaaaatgaga
ggccgcaatcgcttggttcctcgtctcttgggagtgaccaaggattcggtgctccgtttg
gatgaaaagaccaaggaaatattaaagacctggcctttgacaaccgttcgtcgttgggca
gcctctcccaatgtgttcacgctagattttggcgactaccaagaccaatactactccgtc
caaaccagtgaaggcgagcaaatctctcaactgatcgctggatatatcgacatcatcctg
aagcgccgtcagcgtcgcgagcatattggcgacgacggcaatgaagaagaggccatggag
gaggagctggtcactccagggagagccattacgatggttggtttgccaggaaccaattac
aaaaaggccgagcaaagtaatttggcccagcccggcgttctgcgaaattcaggagcggca
agacatccttttaggactggccaaggccgttgccatgaaatccagttgtctgggccacaa
cgtgccttggtttctacaatcagtcatggacaagaatccatcaatagggcagaaggcttc
ttgaaccagaaggccactctgccttccttgggcaatgatccagcctcgtaccgatggaaa
gagacccaaaagaccactaataagcagaccattcactcccaagtctcggctatgaacgct
gctaccgcccaaatggtcactttgaccggccaaggcgacgagaccgatcataatgcggtg
ggagcggctgttaacatgatttccaataacctcccggaaatggccaagggcgtccaaatg
ttggctgctctcatggatgatgaaggtgccaacggagacgatctaatgggtgccgctcgc
aacttgtgtacagccttcactgaccttttggctgccaccgagccccaatcccgagagcca
agacaacatatgctgaccgcagccagtcaagtgggatccgcctcccatcgcgtgctatac
actattggcgaagaggaagtggcggacaaggagcggcaagacatccttttaggactggcc
aaggccgttgccaatacaactgcggctttggtcctcaaagccaaaaatgtggcctcaaaa
tgccccaatcagaccactcaaaacagagtgattggcgccgctacgcaatgcgcacttgga
acaagtcaacttgtggcttgcgccaaagttgtggcccctaccatatctgatcccatgtgc
caagaacaactggtcgaggctgccaaagaagtggccaagtccgtgcaaggttgtgtgagc
acctgcaatgatgtcagtcacgacaaccagtctttgagggaattgggcaagtctgccgaa
gacgtcacgagagccctgaacgagctcttgaaccatgtgaaggacggccactccgacaag
attccagacatcatggaacaaatcatgtgcgcgtcaggcgagttgattgccagttatgac
tcgagtgaaatggttcgtcaggccaggatcttggctcaatccacagctgagctcattcaa
gccattagaggcgaagcagaagcccaatcggactccgatttacagaaacgacttttgtct
gcggctaaggaccttgcggacgccacttcgcagatggtggaagcggcaaagttgtgtgcc
tcccgacccaatgacagggaaagccaagaggccttgaaacgagctgccgagcatctccgc
accacaacccagaatgctgtaggtaccaccatcaagcgaaagatgatcaagcgcctggag
aatgcggccaaacattctgcagccactgctacccaatgcatcgctgccagtcaaggggtt
ggtgcccataacacgaactccatctcccaagaagaacttatggagagttgcaagggtgtg
gctgatgtcattccccgactggtggaaggcgtcaagatgtccatgcagaacccagatagc
gccatggcccaattaaacttgataaacaatgcggagcaattcatgatgccatcgtcaaga
ttactcatgtccacaagatcgactctgcccactgtgtccaatcaagcggcacaattgcaa
ttgtccaattcatctaagcaaatggataacgccttgcgagaattgagatcgtgcattggc
aaggctcaccaagtgtgtgctgctttagagattgaagcctcggcggatctgattgattct
cttcagcaagaaattgaggagttcagaagctctgccgccacttttaacttgaaaccaatg
ccaggcgagactttggaaagcgctactttacttcttaacacaacgagcaaatctgtgagc
tcaaccgtggctcaattgataactgcagcctccgaaggcaatgaggatatcactaaccga
gctgccagagatacggcaaatgcccttagggattacacagcggcaatccggggggtggct
gccaatagcaaagatcgtagctatcaaacgaggatcttggaccaagctcaattggtcatg
tccaagtcggctagattagtcttggaggcacaacgatccatgcagaatcctgctgatcct
cattgtgaacgcaagttgtcggatgccggacaagaagttaacatagcattaagcggaact
atgagttgcttgcctggccaacaagaggtggaacaaacgatgtcagagatcagttcttgg
agccaacaattggagggcgagtctttccgatccagcggacgaccatatggagagctacaa
aatcaattgacttttgctgctgacaaacttagcgatgccacatctgatgttgttcattct
gctccaaggccagatgagttggcacacacatcaagacattttggcgaggtacttggagaa
atgatggagtactccatggacatggctggacagaccaaggtgtccgagcatcgatccaac
atggttactaccatgaagagtgtgacatcgtcttcctcgacattactctcttctgccaag
acagtggcggctgacccctctgctccaagtgccaagggcaacttggctaatgccgccata
tcggtcacagagagcatcaataacttgatcaatgtttacacatcagccgctcctggtcag
aaggaatgtgacaatgctataagagcaattcagtcgtctagacacattcttgagaatgcc
aaccaacccatttctgatgcctcttactatgaatgtttggatgttgtcatggagaaatcc
aaggctttaggggattgcatgactggtattgcgaatcatgccaaaaagtcagagcatgag
gagtttggcgaggcggttcatggtgtatctgatgctatttgtggcttggttgaagctgcc
tcgcaatctgcttaccttgtgggagtgtctgatccaagtagcgtgggtggaaggcatggt
attgtagatcagaaccaatttatgcgggcctatcaagcaatcaagattgcttgtcaaaat
ttggttaacccctccagtgggcaacaccaaatcttatcctctgcaacagtaattgccaag
cataccagcgcattgtgcaattcgtgcagaattgcttcatccaaaacggacaatccagtg
gccaaacgacaattcgtccaatcggcaaaggatgtggctaatgcaaccgcatccctggtg
aaagaaatcaagaaattggactcgaattacaatgactccaaccgacaatcttgctctgct
gccacaagaccattgctggatgccgtggaaaagttgtgccaatttgctaactcccctgat
tatgcctctgttcctgcacggatctctcgagaaggacaaatggcgcaagaacccatttta
aactctggatctttcatcattgagggctcatgtgctatgatccagtcagctaagtccttg
gcagtaaatccacgagaccctcccacctggcaatcattggctaacagtagtaagtctgta
tctgattcgatcaagaatcttgtggcttcaattagggataaagctcctggccaacgggag
tgtgatgaggccattgagaaactgactatcaatatccgagaattagaccaagcttcgttg
gctgccatcaatcaaaacctagcccccaaaacggataaggacatcaaacaattcacagaa
caaatggagaatgctgccacccaaatttcacaaaaacttccagacgttcaaatgtcggct
aaaagtgaagctgagcgcctgggacatatggtcactgccatggtcagttactttgatcct
ttagtcgctaatgcaattgggtcagcttcaaacatggttagctcaaagcaacaagtcctg
gttttggatcagactaaaaccgtcgccgagtgtgcccaacaattgctgtacgctgccaaa
gagagtggaggcaatccaaaggctacccatgtccatggcgacattgatgaatccgctgat
gccatgagcacctctatacaagagcttatcggatctattgagaaactggcaccgaacctt
ggagtcgtcagtaagcttgtgagttgcattactgaagccattttcacagtggacgactat
cgaaatgtggatgtctccgtctctggaccggggcggggtcgtggggagcagagcttcgta
agccttcaaagcaccatgatgtcctcgacaaaagagattgctcgcactgcccaagaaatc
gtaatgaaatcatcaagcgatccaggtcaattgggcaatctggcctcgcacatatccgtc
tgttaccaggaattggccagagacaccaaaggaacctgttctggagcctcgaacatggag
gttggccaacgtattcgatctgctgtgcaagaattgggtcaatcgaccatagatttggtg
aaagctacaggcaattgtcaattaacgcctaacgatagcttcgctttgtgagacatttcg
gaaaatgcccgttcagtgggcgagaagtgttctaatgttttggccgctttaaacgctgcc
aacactggcactcatgctttggaaaatgctgccaatacagtatccggcatcatcggggac
ttggagaccaccattatgtttgccaccgccggcactttgaatgccgatgacggagatgac
gcttttgctgaccatcgggaaaatattctgaagaccgccaaggcgctagtggaggatacc
aaaaccttggttgccggcgccgcttcttctcaggagcagttggccgtagcagctcaaaat
gccgtgacaaccattgttcaactgagtgaagtggtcaaagctggagccgctagtttggga
tcccctaaccgcgaggctcaggtcatgctgatcaacgctgtgaaagatgtggcttcggcc
ttgggcgatcttatgcagtccactaaggctgcctccggaaagagcatccaagacccagcc
atgcaccagcttaaggattcggctaagattatggtcaccaacgtgacttcacttttgaag
accgtgaaggctgtggaagacgaacatagccggggcactcgcgccttggagtctagcatt
gaggccattgcccaagagatccgagcattcgacttacctgagcctcccaaatccagagcc
gaacctgaggatctcatccgagccacacgaccgatcaccttggccaccgggaaggctgtt
tccgctggaaagagctgtaaacaagaggacatcattgttgccgccaacatgggtcgcaag
gctgtctcagacatgctcaccacgtgcaaggctgccgctttccattcccaaaaaagccaa
gcacgctctcaagcactccattcgggccatgatgtggctgttcaataccgggagctcctc
caaatggtgatgcacaatgtgaacaaaccaggatcgtcggagtcgcgaacaaatttgggc
aacatctcccgaaagattgcccaatgcgttaccgaattagcggctgccgccgagatgctc
aaggacgacgattgggtcgatccatcggatcctactttcattgccgagaacgaattgttg
ggcgcagccaagtccatcgaaaatgcggccaagaaattggcaagcttgaaacctcgccgc
gagatcaagggcaaggaggtggatgccaacatgaactttgacgagctcatcttggatgct
gccaaatcaatcgcctcggctaccgcagctctgatcaaggccgcatccgaagcccaaaga
gaattggttcgacaaggcaaggttcaaaagacttcccatttgaactctgaggatggtcag
tggtcggagggtctcgtatcggctgcaagattggtggccgcagccactcacaatttgtgt
gaagctgccaatgctttggtcaagggtcactcgtcggaagaaaagctgattggtgccgct
aagcaagttgcgggatccaccgctcaattgctcttggcttgcaaagtcaaggctgatccc
gaatcggccagcatgaggagactcgaggctgcctccaatgcggtccgaaaggccactgac
aaccttgtgaaggctgctcaacaagccttggaacaagaggaagagaatgccgatgtcgac
ctgaataagagcgccgtgaataccgtcgtagaggagatcaatgctcgcagtgaagttctt
agaatggaacgagaattagaacaagccagaggtcgcttggaaaagctccatcaaaggcga
tatcagaccgattccgagacggagcactcaggatatgagtcctcaagctacgacttaacc
ccttcccaaggtcgaaaattgttcaccactcctcatgacaaaagccagtatcatcaaaag
accttgtttgcatactcggatcgatccggagacgagagtgctttcgattcgggccccagc
ttcaatgaatccctccaacggttccgcacgggtgcgacagccactgccgatggatctggc
tccaattcctccacctataaatacagctcctctagtcggcaaacttccaaaagttcgaat
gtgactcgctcggtggaggagcagcagactgtcatcacccggaattcgcaaaagtcctat
catattgaatga
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integrated database retrieval system
