Tigriopus californicus (tidepool copepod): 131893172
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Entry
131893172 CDS
T09700
Name
(RefSeq) integrin beta-2-like
KO
K06493
integrin beta 3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03266
Virion - Herpesvirus
tcf04081
Hormone signaling
tcf04145
Phagosome
tcf04148
Efferocytosis
tcf04512
ECM-receptor interaction
tcf04517
IgSF CAM signaling
tcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
131893172
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
131893172
04512 ECM-receptor interaction
131893172
04517 IgSF CAM signaling
131893172
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131893172
04148 Efferocytosis
131893172
09142 Cell motility
04820 Cytoskeleton in muscle cells
131893172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131893172
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131893172
04515 Cell adhesion molecules [BR:
tcf04515
]
131893172
04090 CD molecules [BR:
tcf04090
]
131893172
Membrane trafficking [BR:
tcf04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
131893172
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131893172
Cell adhesion molecules [BR:
tcf04515
]
Integrins
Integrin beta subunits
131893172
CD molecules [BR:
tcf04090
]
Proteins
131893172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
vWA_SIBA-E
EGF_TEN
EGF_2
EGF_integrin
Integrin_b_cyt
VWA
I-EGF_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
131893172
NCBI-ProteinID:
XP_059099120
LinkDB
All DBs
Position
2:complement(5054922..5058472)
Genome browser
AA seq
870 aa
AA seq
DB search
MQTWQRFFIPLWAFLSLSLGASDDYCTDELNQPISSCGRCLWRPDCHWCPTKISELARGC
IKRAIPCSDTPIQSRPSVRQIMAKPIAKENWISPQQVQLNLSPQTPGNVTFQAQLFDLPV
DIYFLMDLSNSMTIHKTNLVNAADEIAQEVMSLTSDYRFGFGSFSDKPTPPFASELSTYK
TMQNRNQPPPYSFHHHVSMTSNATAFKKTVENSPLAGNVDSPESGMDALMQVLACDEVIG
WRQDVRKVIILITDEDTHFAYDGYLGGITIPNDGECHLTLSEEGDHHYYDKQLEMDYPSF
GHVADKMSQKNVALIFAVDEYMQQLYKDLSKFLQGTSNVGLLAKEASSLTSIVTQQYRQI
KSRLALQASTDIKNLDLKLTGDKCENPTPTSVVCSNVAQGQSLEFQLQITAKEDLCQNPS
DEHRVMVSIVGSSNHQMTVNLNCEHCNCDDGARFPNAPQCKKKGTFHCGGCLCDENHVGR
SCQCELTQTSGDLTETCIERGQAIPCNGRGDCNCGVCQCQGKYRGDFCQCHVDQCPTKMP
GNPCSGHGHCSCDKDSQTTCTCYEGWSGSDCGCAQNFDACQTKFTRDPCMGRGTCVCGEC
QCQSGYYGKYCQKSTSMTTCEKLEPCVKLRAFKLEDEDADEIHAEWLEECKANLFMGAQY
VFGGMQNVLKACQNNLDESSMIFDPSIVQDFECEDLLKRYELEQLERKEERPESSGHSNF
SKRGDTNIWSQERILLTDTSNMERCVGYKDRCAFSFYHDNIEADKYFSLDPEKDPGKVLV
AFRNVSGTYQAITSCTVIPMAVIVGSSIGLLLLSGIVLLITAIVIVNINDLRRWKQYQAW
KAENERQLGEQDNPLYESKSTTFQNPSFNS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacttggcagaggttcttcatccctctttgggcctttctctccctatcgttgggt
gcctccgacgattattgcacagacgagctcaatcagcccatttcatcgtgtggcagatgc
ttgtggagaccggattgccactggtgccctaccaagatctcagaattggcccgtggatgc
atcaaaagggccattccatgttctgacacacctatccagtcgagacccagtgtccggcaa
attatggcaaagcccatcgccaaggagaattggattagtcctcaacaggttcaactcaac
ttgagcccacagacgcctggcaatgtcaccttccaagcccaactctttgatttgcccgtg
gacatttatttcttgatggacctttccaactccatgacaattcataaaactaatctggtg
aatgcggccgatgaaattgctcaggaagtgatgtcactcacttcagattaccgttttggt
ttcgggtcattttcggacaagccaacacctccgtttgcttccgaattatcaacttataag
acaatgcagaacagaaatcaaccccctccctacagttttcatcatcacgtctccatgact
tcgaatgccactgcgttcaagaagacggttgaaaactcgccgttggctggaaatgtggac
agtccggaatccggcatggatgcattgatgcaagttttggcctgcgatgaggtcattgga
tggcgacaagacgtccggaaagtcatcattctaatcactgacgaggacactcatttcgct
tatgatgggtacctgggtggaatcaccattccaaacgatggcgaatgtcacttgacttta
tccgaagaaggagatcaccattattacgacaagcaacttgagatggactacccgtccttt
gggcacgtcgccgataagatgagccaaaagaacgtggctctgatctttgctgtcgacgag
tatatgcaacagctttacaaggacctgagcaagttccttcaagggaccagcaatgtggga
ctgctagccaaagaagcatcctcgctgacctccattgtgacccaacaatatcgtcaaatc
aagagccgcttagccttgcaagcctccactgacatcaaaaatctcgaccttaaattgaca
ggggacaagtgtgagaaccccacccccacaagcgtcgtttgctccaacgtggcccaaggt
caatctctcgagtttcaattgcaaatcacagccaaggaggacctctgccaaaacccgagc
gatgagcatcgtgtcatggtgagcattgtgggctcaagcaatcaccagatgaccgttaac
cttaattgcgagcattgcaattgcgacgacggagccaggttccctaatgctccccaatgt
aaaaagaaggggacattccattgcggcgggtgtctctgtgacgagaatcacgtgggtcgc
tcttgccaatgtgaactcacccaaacgtcgggagatctgaccgagacatgcatcgagcga
ggtcaggccattccttgcaatgggcgtggggactgcaattgcggggtatgtcaatgccaa
ggcaaataccggggcgacttttgccaatgccatgtggaccaatgtcccaccaaaatgccg
ggaaacccatgttctggccacggccattgctcttgtgacaaggattcccaaaccacgtgc
acgtgctatgaaggctggtcgggttcggattgtggatgcgctcagaacttcgatgcctgc
cagaccaagttcacgcgagatccctgtatgggtcgcggcacctgcgtctgtggcgagtgc
caatgtcaatcaggatactatgggaagtactgtcaaaagtccacctccatgaccacgtgt
gagaaactcgagccttgtgtcaagctcagggcctttaaactggaggacgaagacgcagac
gagatccacgccgaatggctcgaggagtgcaaggcgaacctcttcatgggcgcacaatat
gttttcggcggcatgcagaacgtcctcaaggcttgtcaaaataaccttgatgagagttct
atgattttcgatcccagtattgttcaggatttcgaatgtgaggatctactcaagcgatac
gaattggaacaactggaacgaaaagaggagcgcccagaatcgagcggtcactccaacttt
tccaagcgaggcgacaccaatatttggagccaagagcgcatcctattgaccgacacctcg
aacatggagcgttgcgtgggctacaaagatcggtgtgccttttccttttatcatgataac
atcgaggccgacaaatattttagtctagatccagaaaaggacccgggcaaagtgttggtg
gctttccgcaatgtgagcggaacctatcaagccatcacctcctgtacggtgattcccatg
gccgtgatcgtggggtcgagcattggactcctcctcctgagtggtatcgttcttttgatc
accgctattgtgattgtcaatatcaacgatctccggcgatggaagcagtatcaagcttgg
aaagccgagaatgaacgacaattgggtgaacaagacaaccccttatatgaaagcaaatcc
accactttccaaaatccctcattcaactcttga
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