Tatumella citrea: A7K98_18385
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Entry
A7K98_18385 CDS
T04873
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tci
Tatumella citrea
Pathway
tci03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A7K98_18385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tci03021
]
A7K98_18385
03400 DNA repair and recombination proteins [BR:
tci03400
]
A7K98_18385
Enzymes [BR:
tci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A7K98_18385
Transcription machinery [BR:
tci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A7K98_18385
DNA repair and recombination proteins [BR:
tci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A7K98_18385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
FapA
Motif
Other DBs
NCBI-ProteinID:
ARU95532
UniProt:
A0A1Y0LBV1
LinkDB
All DBs
Position
complement(3915477..3919505)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTFSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQIIDLFFEKVVYEIRDNKLQMA
LVPERLRGETASFDLESNGTVYVEKGRRITARHIRQLEKDNVQHIEVPVEYIAGKVVARD
YIDESTGELIIAANMELSMDLLAKLSQAGHKRIETLFTNDLDHGPYISETLRVDPTNDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGAGIL
SHDDIIQVMKKLIDIRNGIGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVIDSQVT
DEIHYLSAIEEGNFVIAQANTNLDDNGLFVDDLVTCRNKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYAGEAGIDIYNLTKYTRSNQNTCINQMPCVNLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
TEELQILEAGLFTRIHSVLIAGGIEAEKLDKLSRERWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQDVTR
LREFIQRAYDLGSDTRQNVDLNTFSDDEVMRLAENLKKGMPIATPVFDGAKESEIKELLT
LGGIPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gtactggacattccatatctcctgtctatccagcttgactcgtttcagaagtttatcgag
caagatccggaaggccagtatggactggaagctgcattccgttccgtattcccaattcag
agctacagtggtaactctgagctgcaatatgtcagctaccgtttgggcgagcctgttttc
gatgttaaagaatgtcagatccgtggtgtgacgttctctgcaccgctgcgtgttaaacta
cgtctggtcatctacgagcgcgaagcgccggaagggaccgtaaaagacattaaagaacaa
gaagtctacatgggtgaaattccactcatgacagacaacggtacctttgttatcaatggt
actgagcgcgttatcgtttctcagctgcaccgtagtccgggcgtcttctttgacagcgac
aagggtaaaacgcactcttccggtaaagtgctgtataacgcacgtatcattccttaccgt
ggttcatggctcgactttgagtttgacccgaaagacaacctgtttgtccgtatcgaccgc
cgtcgtaagctgccggccactattatcctgcgtgcattaaactacaccactgaacaaatc
atcgatctgttctttgagaaagttgtttatgaaattcgcgataataaactgcagatggcg
ctggtacctgagcgtctgcgcggtgagactgcctcttttgaccttgagtcaaacgggact
gtctatgtcgagaaaggccgtcgtattactgcccgtcatatccgccagctggaaaaagat
aatgtccagcacatcgaagttccggttgaatatattgccggtaaagtcgttgcgcgtgat
tacattgatgagagcaccggcgagctgatcattgcggctaacatggaattgtccatggat
ctgctggccaaactgagccaggcaggccacaaacgtattgaaacgctgttcaccaatgat
ctggaccacggtccatacatttcagaaacgctgcgtgttgacccaaccaatgaccgtctg
agtgcactggttgagatctaccgcatgatgcgtcctggtgagccgccaacgcgtgaagct
gcagagaacctgttcgaaaatctgttcttctctgaagatcgttatgatctgtcagcggtt
ggtcgtatgaagttcaaccgttcactgctgcgtgatgaaatcgaaggtgcaggtatcctg
agccacgacgacatcatccaggtcatgaagaaactgatcgatatccgtaacggtatcggc
gaagtggatgatatcgaccacctcggcaaccgtcgtattcgttctgtcggtgaaatggct
gagaaccagttccgtgttggtctggtccgtgttgagcgtgcggtgaaagaacgtctgtct
ttaggcgatctggataccctgatgcctcaggatatgatcaatgccaagccgatttctgca
gcagtaaaagagttctttggttcaagccagctgtcacagtttatggaccagaacaacccg
ctgtctgaaattacgcacaaacgtcgtatttctgcactgggcccgggcggtctgacacgt
gaacgtgcaggcttcgaagttcgagacgtacacccgactcactatggtcgtgtttgtcct
atcgaaactccggaaggtccaaacatcggtctgattaactcattgtctgtttatgctcag
actaacgagtatggtttccttgaaaccccatatcgccgtgtgattgacagccaggtaact
gacgaaattcattatctgtcagcgattgaagaaggtaacttcgttatcgctcaggcaaac
accaacctcgacgataatggtctgtttgttgatgatctggtgacctgccgtaacaaaggc
gagtctagcctgttcagccgtgatcaggttgactacatggacgtttctactcaacaggtt
gtttctgtcggtgcgtctctgattccattcctggaacacgatgatgctaaccgtgctctg
atgggtgcgaacatgcaacgtcaggctgtaccaactctgcgtgctgataagccgctggta
ggtaccggtatggaacgtgctgtagcggttgactccggtgttactgcagtagctaaacgt
ggcggtactgttcagtacgtcgatgcatcacgtatcgttatcaaagttaacgaagacgaa
atgtatgccggcgaagcaggtatcgacatttataacctgaccaaatatacccgttctaac
cagaacacctgtatcaaccagatgccgtgtgtcaacctgggcgagcctattgaacgtggt
gatgtgctggctgatggcccgtctaccgatttaggtgaactggcgttgggtcagaacatg
cgcgtggcattcatgccatggaatggttataacttcgaagactccatcctcgtttctgag
cgtgttgtccaggaagaccgtttcactaccatccatatccaggaactggcctgtgtgtcc
cgtgacaccaagctggggccggaagagattaccgctgatatccctaacgtgggtgaagct
gcactctctaaactggatgaatccggtattgtttacatcggtgcggaagtgaccggtggc
gatatcctggtcggtaaagtgacacctaaaggtgaaactcagctgactccggaagaaaaa
ctgttgcgtgctatcttcggtgagaaagcctctgacgttaaagattcttctctgcgtgta
cctaacggtgtatcagggacagttatcgatgttcaggtctttacccgtgatggcgtagaa
aaagacaaacgtgcgctggaaattgaagagatgcagctgaagcaggctaagaaagacctg
actgaagaactgcagatcctcgaagctggcctgttcactcgtattcatagcgtcctgatc
gcaggcggtattgaagctgagaaactggacaagctgtcacgtgaacgctggctggaactg
ggcctgactgatgaagagaaacagaatcagttagagcagttggctgaacagtacgacgag
ctgaagcacgagtttgagaaaaaacttgaagctaagcgccgtaaaatcactcagggcgat
gatctggcaccaggcgtgctgaaaatcgttaaggtctacctggcggttaaacgtcagatc
cagcctggtgataaaatggcaggtcgccacgggaacaaaggtgttatctctaagatcaac
ccgatcgaagatatgccttacgatgaaaacggtactccggtagacatcgtactgaaccca
ctgggcgtaccatcgcgtatgaacatcggtcagattctggaaacccacctgggaatggca
gcaaaagggattggtgacaaaatcaatgccatgctgaaacagcaacaggatgtgaccaga
ctgcgtgagtttatccagcgtgcttatgacctgggttcagatacccgtcagaatgtcgac
ctgaacactttctcagacgatgaagtaatgcgtctggcagaaaacctgaagaaagggatg
ccaattgcgaccccggtcttcgacggtgctaaagaaagtgaaatcaaagagctgctgact
ctgggtggtatcccgacttcaggtcagatcactctgtttgatggtcgtaccggtgagcag
tttgagcgtcaggtaaccgtaggttacatgtacatgctgaaactgaaccacctggttgat
gacaaaatgcatgcgcgttctaccggttcttacagccttgttactcagcagccgctgggt
ggtaaagctcagttcggtggtcagcgcttcggtgagatggaagtgtgggcactggaagca
tatggtgctgcttataccctgcaggaaatgctgactgttaagtctgatgacgttaatggc
cgtaccaagatgtataaaaacatcgttgacggcaaccatcagatggaaccaggcatgccg
gaatccttcaacgtattgttgaaagagatccgctcgctgggtatcaacatcgagctggaa
gacgagtaa
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integrated database retrieval system
