Thermodesulfobacterium commune: HL41_02770
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Entry
HL41_02770 CDS
T03212
Name
(GenBank) hypothetical protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
tcm
Thermodesulfobacterium commune
Pathway
tcm02020
Two-component system
tcm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HL41_02770
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HL41_02770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcm03021
]
HL41_02770
Transcription machinery [BR:
tcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HL41_02770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
Put_DNA-bind_N
MarR_2
HTH_IclR
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AIH03800
UniProt:
A0A075WRY8
LinkDB
All DBs
Position
519321..520733
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AA seq
470 aa
AA seq
DB search
MIELKNQLKLSQQLILTPQLKLLLKVLQLNTLELEEYIVQEAQTNPFLEIEYKDLAPKVS
QDRDHIPEEVKLTDEIDLGTEEFLEKSLYLIEPQEEPEEPIWEKTLKAEDKLSDYLLWQF
RMKEFTPVEYEIAQYIVGNLDEKGYLTVSSEELSKELNIAVEKVEKVRNVIKFLDPVGVA
SYDVKECLLTQLLFMGYKEESLPYVLIEKYFEQIPEGVDILSQKLGIEPLKIEEALEVIK
HLEPYPARNFYVETSTYIEPDLRFYREDEEWKVEVLKEKSFKVRLNNFYLEYLKLKKKDP
RFLKSKQFLKEKFKEAENLLKALDSRYSSLYKVGAAILTHQKEFLEKGIKYLKPLTLRML
AEETQLHESTISRIINRKYVQTPSGVFSLKFFFSSGYESSDGTSLSSKAVKDLIKQIISQ
ENPEKPLSDNEVAKVLKSKYGVNIARRTVTKYREELQIPSVRERKKQNKR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttaaaaaccagttaaaacttagtcaacaactgattttaacccctcaacta
aagctcttgttaaaagtccttcaacttaacaccttagaattagaagaatatatagtacaa
gaggctcagaccaatccttttttagagatagaatataaagatttggctccaaaagttagt
caagatagagaccatatacctgaagaagttaaactaacagatgaaatagatttaggaact
gaggaatttttagaaaagagtttatatcttatagaacctcaagaggaaccggaagagcct
atctgggaaaaaacccttaaggctgaagacaaactcagtgattatttactctggcagttt
cggatgaaagagtttactcctgtcgaatacgaaatcgcccagtatatcgtagggaatctt
gatgaaaaaggatatctaaccgtttcttctgaagaactatctaaagagctgaacattgct
gtagagaaggtagaaaaagtaagaaatgtcataaagtttttagacccagtaggggtagcc
tcttacgatgttaaagaatgtttacttactcagcttttatttatgggttacaaagaagaa
agtcttccttatgtgctgatagaaaaatattttgaacaaattcctgaaggagtagacata
ctttctcaaaagttaggtatagaacctttaaagatagaagaggctttagaggttatcaaa
catcttgagccctatcctgccagaaatttttatgtagaaacttccacctacatagaacca
gacctcaggttttatagggaagatgaagaatggaaggtagaggttctcaaggaaaaaagc
tttaaggtaagattaaataacttttatttagaatacttaaaattaaagaaaaaggacccc
cggtttttaaagtcaaaacagtttttaaaagagaaatttaaagaagcggaaaatttgcta
aaggctttagacagtagatattcaagcctttataaagttggagcagccattttgacacat
caaaaggagtttttagaaaaaggaattaaatatttaaaacctcttactttaaggatgttg
gctgaagaaacccagttgcatgaatctactatcagtaggattattaaccgcaaatatgta
caaacgccttcaggagttttttctcttaagtttttcttttcttcaggttatgaatcttct
gacggaacaagcctttcttctaaagcagtaaaagaccttattaaacagatcatttctcaa
gaaaaccctgaaaaacctttaagtgataacgaggtggctaaagttttaaaatctaaatat
ggggttaatatagcaagaagaacggttactaaatacagagaagaacttcaaattccctca
gttcgcgaaaggaaaaaacaaaataagaggtaa
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