Thermococcus camini: TIRI35C_2009
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Entry
TIRI35C_2009 CDS
T07551
Symbol
lrpA
Name
(GenBank) HTH-type transcriptional regulator LrpA
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
tcq
Thermococcus camini
Brite
KEGG Orthology (KO) [BR:
tcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcq03000
]
TIRI35C_2009 (lrpA)
Transcription factors [BR:
tcq03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
TIRI35C_2009 (lrpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
NirdL-like_HTH
HTH_20
HTH_Mga
HxlR
HTH_DeoR
HTH_IclR
AsnC_trans_reg_3
Sigma70_r4_2
HTH_5
Sigma70_r4
HTH_23
MarR
RepL
HTH_Crp_2
HTH_28
MarR_2
FaeA
TrmB
Rrf2
TFIIE_alpha
HTH_Tnp_ISL3
DUF4423
HTH_36
HTH_29
HTH_12
HTH_34
HTH_1
DUF2805
DUF7343
HTH_27
DUF2774
HTH_PafC
NapD
Myb_DNA-bind_8
RWP-RK
HTH_10
HTH_50
P22_Cro
Phage_terminase
HTH_45
HTH_9
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
CAD5245163
UniProt:
A0A7G2DDD4
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All DBs
Position
TIRI35C:complement(1842139..1842564)
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AA seq
141 aa
AA seq
DB search
MLDERDNIIIEMLTKDARTPFTEIAKVLGISETAVRKRVKALEEAGVIKQYTVVVDPSKL
GYNLVSLTGVDTLPEKIFDVASKLKEFDFVREVYLTSGDHMIMAEVWARDGEDLSDIISN
KIGRLDGVTKVCPAIILEKLK
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacgagagagataacatcataatcgagatgctcaccaaggacgcccgcactccg
ttcacggagatagcgaaggtcctgggcataagtgagaccgccgtaaggaagcgtgtaaag
gccctggaggaggcgggggttataaagcagtacaccgtcgtggtggatccatcgaagctc
ggctacaacctcgtcagcctcacgggcgttgacacgctgccggagaagatattcgacgtt
gcgagcaagctcaaggagttcgatttcgtgagggaggtgtacctgaccagtggtgaccac
atgataatggccgaggtctgggccagggatggggaggacctctccgacataatctccaac
aagataggcaggcttgatggcgtcaccaaggtctgccctgcgataatcctggagaagctg
aagtga
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