Trypanosoma cruzi: 509247.30 Help Entry 509247.30         CDS       T01012                                  Name (RefSeq) hypothetical protein   KO K12604   CCR4-NOT transcription complex subunit 1 Organism tcr  Trypanosoma cruzi Pathway tcr03018   RNA degradation Brite KEGG Orthology (KO) [BR:tcr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     509247.30  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tcr03019]     509247.30 Messenger RNA biogenesis [BR:tcr03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      509247.30   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      509247.30 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 Motif Other DBs NCBI-GeneID:  3540670 NCBI-ProteinID:  XP_809977 UniProt:  Q4D6H3 LinkDB All DBs AA seq 2329 aa AA seqDB search MLYEHTIDISSSRGATVRYLIAAATKSTLQTTLQTLEKLAAQSVELHRFVIMAAVSAMRK SPQNEEKCALASKLLSAALEKSNALTLVATALEESPTQVTNEVLTNLMVKDLKLSPTQQL QFAMGLFLGSTKGKEAATAFLNTFGVSPATLKDDNGSMWALGILARQAGGMESLDTQLSS AFNGVTLFPNSGVADTHVSLSKIIGELGTACVATQADCRELLSFFPHAFTESDVAEVLGF FASQGSAPSDINTYNTLMSLTGREPTKTQHSATISPIPLLELLQERSSTKMDWDAILRML DKPGEEAFRQKHVAIVFDAYYKFKGTGTPGTYPPVTIFLGRWNNVGRQRSALEYILKHPE KVSLQSLPRDQMAAAELIESTSAAATAASPSATTATTGTARISESELWRFFPFVEAAVHV ASRDRTFDMETLRPAAQRYPLLLFSMLLFGTFPGTVKNFSTAKLILKERWLALDRVAAIV LPEAEKNGRLNAVIMVLSELTVVDASRTIEVMETVLKSKTAVKAFLASGGNPRLVTAIAM CMEDSSETGETWISKALEGKLHFRANAAENRFAVAMSIVEVAEQLITKQNYVSNATAALN TFLASSLNDVLRDVAEQARVLLASSDSLFPSDIENEATEFYKRMYAIGDPTNTASLAFIE QLLKSSKTRDKQLYACIVSIMFEEHGAIECYPQKELQLFAVLYGQMIARELLPHSQQQHA WSLLLPVIVKPKGPVMEEYGIIALEQLKPRLAEWPQYGRALRYVKDLDIKIPGIMAAINR GIKAEEAARQQQNRQPLPEKPPSKEAESLLSDPAVLAVSTERRDSTAAAAAAADQQKERS AAATLHQHDIGTLLSSKNITAPPRVIQEQINFLIGNTDMHNIENNASDLAKQLRPEYYEY FAEYLVIKRAALEPNYHSIYLDLLDKLQSKPLEKAIRNATISSIKRLLNSDKIRADPGER SLLKNLGYWLGLLTLAKNIPITVQDLCFKDLIFMGLREGKLMAVVSCVSRVLHHCMSSHF FCPPNPWTMRLLCLLWEMYNLKHLRVTLRFEVEVLCKHMNVTLQDIERYYTLHPISTASQ LRMVEIYKEINLHQSGDFRVDEKDLHEPSPLLMQQPKAPPPLQQQQQQQQQQQQQQPQSV QQVQQEQQQQQQKQQQQQQQRQTRQLQASAEPFKPKDAMPVANTMPSADVSASGHPAILI TPDNVRVSDEDVSYFANRLDVYKGALARTLEKIVQDAKVSLQRAVMIATVTACSIVTKDF LLDPDVGGMLRAGQAMARSLAANLCTVTVRDSLIEPFNKHVAVLAEHFVEVHLPNVMERR ERFRNKVRENNMELCVRVLEYQAAEEAERRVHDKLMQVVREKLEAINTREFPRIPKEHYE VQDILMQMGEVLRPPRNVPPLQRAVYDEYRNNVPIVGLLATYLRTIEDATVAHYSMENCK VLSLTSPEFTNKSLGDSHDTIRMRVINISNMITGETAFYCVSHLLRKLMALSDAMKQVEP TGGGSMEANTIRHKNVCEFLNEVYLFVLQTCFERGKEPVREELTRLFLQDERRWRHADLV TNLLRIKVINVTRLDEVLSKAILDSSMSGPAIDFAGSVIKKALITEKLVVPKNLKDTLAQ LELVAHPPRSIAEKQQQQQQQQQQQQPAANSSSTATTTQQQQQQQSHSHQQHQQQQQQHQ QQRPEGATTAAASGGQALTIMNLYPLLSSLVPANVRRLVVLSQTQHDPEEVEKVRRLFDE WMNINSRRSHGTSSEPSASATTTTTTPSPGTTSSSKNPPQYEYILTLRKQGQLDNHQLGT FLSLCTRFCVEHYATKTLELERASPSTLHNVSTAEWKPGNAPPHRYPYDGTVFAKVDAFA DLATVLLYYCSLKNDTRQLLSLLRRILDAFQRSLIDHHQNVVLQMQQKQQQQQQLPINKM ELPPETAFVPVFQQQPYVRFFSILFTTLVRADAPNRETTEQITHVFAELLHRLSPMKYPA FAFGWLELVSHRIFLNRCLRTLALWPYYVALLVQGLEFIEHFTRDGAIPKNILVFYKAFF KLMLVLTHDYSRFLITYHYQLCDAIPPYCVQLLNTVLCSFPSGVKLPEFFLRVPDDSPEM RKPLNTENQVKCIEESFWQNGFDGNQLAEKIRDERPMDETYMRSVVDKLQSAPNWRLMNA IVLHVCIVYLDMHELIIKPDFSESNAMRFYRYLASTLDNKHRYHFICSCANHLRYPNCQT NFFVKVILQLFLQHPSIRNPTTRLCIQEQITRVAVEKTLIIQPHPWGVLSTFMELMRASE YGFWEKSFISSTPFLESMFHKLRRSVESRNAQQQQQQQQQQATTTTKKA NT seq 6990 nt NT seq  +upstreamnt  +downstreamnt atgctgtacgagcacaccatcgacattagcagctctcgcggggccaccgtccggtacctg attgcagcagccactaagagtacgctgcaaacgaccctacagacattagaaaaactagcc gcgcagtcagttgaacttcaccgttttgtaattatggcggcggtttcagccatgcggaaa tctcctcagaacgaagaaaagtgcgctcttgcctccaaacttttgagcgccgccctggag aagagcaacgccctcacattggtggccaccgcccttgaggagtcaccgacacaggtgacg aacgaagtactcaccaaccttatggtaaaggatctgaaactctcgcccacgcagcagcta cagtttgccatggggctgtttcttggcagcacaaaaggcaaagaggcggcaacggcgttt ttgaacacatttggtgtttctccagccacattgaaggatgacaatggtagcatgtgggcc ttaggcatcttggcacgacaggcgggcggcatggagtctctagacacacagctgtcaagt gcatttaacggcgtgacgttgttcccgaacagtggggtcgccgacacgcatgttagtctc tccaagattataggagagcttgggaccgcgtgtgtggcaacccaggctgactgccgggag ttacttagcttttttccacacgcctttacggaaagcgatgtggcggaggtgttgggtttt tttgcctcgcagggaagcgcaccttctgacatcaacacatacaatacactgatgtccttg accgggagggagccgacgaagacacagcacagcgccaccatctcgccgatacccctcctc gagctcttgcaagagcggagctcgaccaagatggactgggatgccatcctccgcatgctt gataagcccggggaggaggccttccggcaaaagcacgttgcaatagtctttgacgcgtat tacaaatttaaagggacgggtacaccaggcacgtacccaccggtgacgatcttccttggc cgttggaacaacgttggccgccaacgcagcgctcttgagtacatcttgaaacatcccgag aaggtttccctacaatccttaccacgggatcagatggcggcagcggagctcatagaaagt acttccgcggcagctacggcggcttccccatcagccacaacagctacgacgggtacggca cgtatttctgagagtgagttgtggcggttttttccttttgtagaagctgctgtacatgtc gccagccgtgaccgtacatttgacatggaaacacttcgcccagctgctcagaggtacccg ttgttattattttccatgctgctttttggtacgtttccgggtacagttaaaaatttcagt acggcgaaattaattctaaaagagcgttggcttgcccttgaccgcgtcgcggctatcgtt ttgccagaggcggagaaaaatggaaggctgaatgctgtcatcatggtcttgtctgagctt actgtcgtggatgcgagtcgcacgattgaagtgatggagactgtactgaagtccaagacg gcagtgaaggcatttcttgctagcggcggtaatccacgacttgttacagctatcgccatg tgcatggaagattcttctgaaaccggtgaaacatggatcagtaaagcacttgagggaaaa ctgcattttcgcgccaacgccgcagagaatcggtttgctgtggccatgtctattgtagag gttgcagagcagctaattaccaaacaaaattatgtctctaacgctacagcggcgcttaat acgtttttagcctcttcgttaaatgatgtgctacgtgatgtggcagagcaggcacgtgtc ttgctggcctcctcggactccctttttccctcagacattgaaaatgaagcgacggaattc tacaaacggatgtacgctataggagatcccacaaacaccgcctcgctcgcatttattgaa caactactgaaaagttccaagactcgagataagcagttgtacgcctgtatagtgagcatc atgtttgaggagcatggcgccattgagtgctacccacagaaggaactacaactgtttgcc gtgctttacggtcaaatgatcgcacgtgaacttctgccacacagccaacagcaacatgca tggagcctgctgcttcctgtcattgtcaagcccaagggtcctgtcatggaggaatatggt atcatcgcactggaacaactgaagccacggttggcggagtggccgcagtatggacgggcg ttgcgttacgtgaaggatcttgacataaaaattcccggcattatggccgcaatcaaccgt ggcattaaggcagaagaagcggcacgtcagcagcagaatcggcaaccgttgcccgagaaa ccgccaagtaaagaggccgagtcccttctttcggatccagctgtcctcgccgtcagcacc gagcgacgtgactcgacggcggcagccgcggctgccgccgaccaacaaaaggagcgttcc gccgcggcgacgttgcaccagcacgacattgggactttgctgtcgtccaaaaacatcaca gctcccccgcgtgtcattcaggagcagatcaacttccttattggcaacaccgacatgcac aacattgaaaacaacgccagtgaccttgcgaagcagctgcgccctgagtactacgaatac tttgctgagtatctggtgatcaagcgggctgcactggagccgaactaccacagcatctac cttgacctcttggataagctgcagtcaaagccccttgagaaggcaatacgcaacgcgacg atttcatccatcaagcggttgttgaactccgataagatccgcgcagaccctggcgagcgc agcctgctgaagaaccttggatattggcttgggctcctcacacttgcaaagaacatcccc atcacggtgcaggatctctgttttaaggatctgatctttatgggcttgcgtgaggggaaa cttatggccgttgtgtcttgcgtctcgcgtgtgttacatcactgcatgagctcccacttt ttttgtccgcctaacccatggacgatgcggctgttgtgtttgctgtgggagatgtacaac ttgaagcatctgcgcgtgacacttcgttttgaggtggaggtgctgtgcaagcacatgaac gtgacgctgcaggatattgagcggtactacactttacaccccatcagcaccgcctcacaa ctgcgtatggtggagatatacaaggagatcaacctccaccagagcggggacttccgtgtg gatgagaaggatctccatgaaccctctccgcttctcatgcagcaaccgaaggcaccacca ccactacaacagcagcagcagcaacaacagcagcaacaacaacaacaaccgcaatcagtt caacaggtgcagcaagagcaacaacaacaacaacaaaaacagcagcaacaacagcaacaa cgccagactcgtcagctacaagccagtgcggagccgttcaaaccgaaggatgcgatgcct gttgcgaacacgatgcccagtgcggatgtttccgcgtcgggccacccagcgattctcata acaccagacaatgtgcgggtaagtgacgaggatgtgagctattttgcaaatcgtctcgac gtttacaagggggcgcttgctcgcacccttgaaaaaattgtacaagacgcaaaagtgtcg ctgcagcgtgcggtgatgattgccacagtgacggcgtgcagtatcgtcacaaaggacttt cttttggatccggatgtgggaggcatgctgcgtgcaggccaggcgatggcacgttcattg gcggcaaacttgtgcacagtgactgtccgtgattcgttgatagagccttttaacaaacac gttgctgtgttggcggagcactttgtcgaggttcacctcccgaacgtgatggagcggcga gagcgattccgcaacaaagtccgagaaaataacatggagttgtgtgtccgtgtcttggag taccaggcggcagaggaggctgaaaggcgagtccacgataaattaatgcaggtggtgagg gagaagcttgaggccattaacacccgtgagtttccacgcatcccaaaggagcattacgag gtgcaggacattttgatgcagatgggtgaggtgctgcgacctccccgcaatgttccaccc ctgcaacgggcggtgtatgatgagtatagaaataatgttcctatcgtagggcttttggcg acatatttgcgtaccattgaggatgccactgtggcgcattattcgatggagaattgcaag gtcctctcactcacaagtcctgagtttacgaataaatcgctgggggatagccacgatacc atacgtatgcgggttattaacatttccaatatgattacgggtgagaccgccttttattgc gtttcccacctgttgcggaagctcatggcactttcggatgcgatgaaacaagtggaaccc acaggggggggtagcatggaggcaaacaccattcgccacaaaaacgtctgcgaattcctg aatgaggtgtacctttttgttttgcagacatgctttgagcgtggcaaggagcccgtgcgg gaggagctgacgaggctgtttttacaggacgaacgacgttggcgacatgcggacctcgtg acaaacctactgcgcatcaaggtgataaacgtcacgaggctcgatgaagtcctctccaag gcaattctggacagttcgatgtcgggaccagcgatagattttgccgggagtgtcatcaag aaggcactgatcactgaaaagcttgttgtcccaaaaaatctgaaggacacactggcacag ctggagttggtggcccatccgccgcgctcgatagcagagaaacaacaacaacaacagcaa cagcaacagcagcagcaaccagcagccaacagcagcagcacagcaacaacaacgcaacaa caacagcaacaacaatcccattctcaccagcaacatcaacagcagcagcaacagcaccaa cagcaacgcccagagggtgccaccactgccgcggcatccgggggtcaggctttgacgatt atgaacctgtacccgttgctttcttccttggtgccagcgaacgtccgtcggctggttgtt ttgtcacaaacgcaacatgaccccgaggaggtagagaaggtgcgccgtctttttgatgag tggatgaacataaacagccggcggtcgcacgggacgtcatctgagccttccgcttcggca acaacaacgacgacaacaccatcgccggggacgacgtcaagcagcaaaaacccaccgcag tacgaatatattttgacacttcgcaaacagggccaactggacaaccaccagcttggaact tttttgagcctttgcacacgcttctgcgtggagcactacgccacgaaaacgttggagttg gagcgtgccagcccgtcgacgcttcataatgtttcaacggcagagtggaagcctggcaat gccccaccgcaccgctacccgtatgacggcaccgtgtttgcgaaggtagacgcttttgcg gacctggcgactgtgctgctgtactactgctcgctaaaaaacgatacgcgccagttactc tctctgcttcggcgcattctggatgcctttcaacgctctcttattgaccaccaccagaat gtggttctgcaaatgcagcagaaacaacaacagcagcaacagctacccattaacaaaatg gagcttccccctgaaaccgcctttgtaccagtgttccagcagcagccatatgttcgtttt ttcagtattctgtttacgacgctggtacgcgcggatgctccgaaccgtgagacgacagag cagattacgcatgtctttgccgagttgttgcatagattatccccgatgaagtacccggca tttgcctttgggtggttagagcttgtaagtcatcgcatttttttgaaccgctgccttcgt acattggcgttatggccatactacgttgccttgctggtgcaagggctagagtttattgaa cactttacccgcgatggggcgatcccgaagaatattcttgtgttctacaaggcattcttt aagttaatgcttgtgttgacccatgactactcgcggtttctcattacatatcattatcag ctctgtgacgccattccaccgtattgcgttcagctactcaatacggtcttgtgctctttt ccgtcaggtgtgaagttgccggagttctttttgcgcgtgccggatgacagcccagagatg cgaaagccactcaacacggagaatcaggtgaaatgtatcgaggaaagtttctggcagaac ggctttgatggtaaccagttggctgagaagatacgcgacgagcgtccgatggatgagacg tacatgcggagtgttgtggacaaactacagtccgctccaaattggcggttaatgaacgcc attgttcttcatgtttgcattgtttaccttgatatgcatgagcttatcatcaaaccagac ttctctgagtccaatgccatgagattttaccgctacctcgccagcacattggacaataaa caccgataccactttatctgctcctgcgccaaccacctccgctatccgaactgccagaca aacttttttgtaaaggtcatcttgcagttgttcttgcagcacccatcgatccgcaacccg acaacacgactctgcattcaggaacagattacacgtgtggcggtggagaagacactcatc attcagcctcacccttggggtgtgctcagcacctttatggagctcatgcgggcctcggag tacggcttctgggagaagagctttatcagcagtacaccgttcttagaaagcatgtttcac aagctgcgccgctctgtcgagagccgaaacgcacagcagcagcagcagcaacaacaacaa caagcgacgacgacgacgaagaaggcatga

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