Thermomonospora curvata: Tcur_4338
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Entry
Tcur_4338 CDS
T01127
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tcu
Thermomonospora curvata
Pathway
tcu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tcu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tcur_4338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcu03021
]
Tcur_4338
03400 DNA repair and recombination proteins [BR:
tcu03400
]
Tcur_4338
Enzymes [BR:
tcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tcur_4338
Transcription machinery [BR:
tcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tcur_4338
DNA repair and recombination proteins [BR:
tcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tcur_4338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ACY99865
UniProt:
D1A395
LinkDB
All DBs
Position
complement(4932122..4935604)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAASRNASNTVTGPNRVSFARIKEPLEVPDLLALQTDSFDWLLGNERWKARVEAALKAGV
RDIPTQSGLEEIFEEISPIEDFSGTMSLSFRDHRFEPPKYSIEECRDKDMTYSAPMFVTA
EFINNSTGEIKSQTVFMGDFPLMTPKGTFIINGTERVVVSQLVRSPGVYFDRSLDKASDK
DIYGCRIIPSRGAWLEFEIDKRDNVGVRIDRKRKQPVTVLLKALGWTEARIREHFGAYES
MNITLEKDHTSGQDDALLDIYRKLRPGEPPTKESAQALLENLYFNPKRYDLAKVGRYKVN
KKLGLRLDMNQGTLTEDDIVATIEYLVRLHAGEEEAVLTAAGPEGVSVPIEIDDIDHFGN
RRLRTVGELIQNQVRLGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQ
LSQFMDQTNPLAGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIG
LIGSLSAYGRVNPFGFIETPYRKVVDGRVTDEIHYLTADEEDRYIKAQANSPLNPDGTFA
EEKVLVRTKGGEIEYLPPEEVHYMDVSPRQMTSVATAMIPFLEHDDANRALMGSNMQRQA
VPLLRSEAPLVGTGMEYRAATDAGDVILAEKPGVVEEVSADYITVLNDDGTRTTYRVAKF
KRSNQGTCFNQKPIVDEGQRVEAGQVIADGPCTDQGEMALGKNLLVAFMPWEGHNYEDAI
ILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGAD
VVPGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEQGKVIGVRVFSR
EEGDELPPGVNELVRVYVAQKRKITDGDKLAGRHGNKGVIAKILPVEDMPFLEDGTPVDI
ILNPLGVPGRMNVGQVLETHLGWVASQGWKIEGDDADWKRSLQAIGATEAGPWTKTATPV
FDGAREEEITGLLSCTLPNRDGMRLIGPNGKAKLYDGRTGEPFKDPIAVGYIYILKLLHL
VDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDV
LGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDSDEDVFR
AAEELGIDLSRREPSSVEEV
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcctcgcgcaacgcctcgaacaccgtgaccggtccgaaccgcgtttccttcgcg
cgtatcaaggaaccactcgaagtcccggacctcctcgcgctgcagaccgacagcttcgac
tggctgctgggcaacgagcgctggaaggcccgggtcgaggcggccctgaaggccggggtg
cgcgacatcccgacccagtccggcctggaggagatcttcgaggagatcagcccgatcgag
gacttctccgggaccatgtcgctgtcgttccgggaccaccggttcgaaccgcccaagtac
tccatcgaggagtgccgggacaaggacatgacctactccgccccgatgttcgtgacggcg
gagttcatcaacaactcgaccggcgagatcaagagccagacggtcttcatgggcgacttc
ccgctcatgacccccaagggcaccttcatcatcaacggcaccgagcgtgtcgtggtgtcc
cagctggtgcgctcgccgggcgtctacttcgaccgctctttggacaaggccagcgacaag
gacatctacggctgccggatcatccccagccgtggggcctggctggagttcgagatcgac
aagcgcgacaacgtcggtgtgcgcatcgaccgcaagcgcaagcagccggtgaccgtcctg
ctcaaggcgctcggctggaccgaggcccgcatccgcgagcacttcggcgcttatgagtcg
atgaacatcaccctggagaaggaccacacctccgggcaggacgacgcgctgctggacatc
taccgcaagctccggccgggcgagccgccgaccaaggagtcggcgcaggctctgctggag
aatctgtacttcaaccccaagcgttacgacctggccaaggtcggccgctacaaggtcaac
aagaagctcgggctgcgcctggacatgaaccagggcaccctgaccgaggacgacatcgtc
gccaccatcgagtacctggtgcggctgcacgccggcgaggaggaggcggtgctgaccgcc
gccggccccgaaggcgtctcggtcccgatcgagatcgacgacatcgaccacttcggcaac
cggcggctgcgcaccgtcggcgagctgatccaaaaccaggtgcggctgggtctggcccgc
atggagcgggtggtccgcgagcggatgaccacccaggacgtggaggccatcaccccgcag
accctgatcaacatccggccggtggtcgcctccatcaaggagttcttcggcaccagccag
ctgtcgcagttcatggaccagaccaacccgctggccgggctgacccacaagcggcggctg
tcggcgctgggcccgggcggtctgtcccgggagcgggccggcttcgaggtccgggacgtg
cacccgtcccactacggccggatgtgcccgatcgagaccccggaaggtcccaacatcggc
ctgatcggctcgctgtcggcctacgggcgggtcaacccgttcgggttcatcgagaccccc
taccgcaaggtcgtcgacggccgggtcaccgacgagatccactacctgaccgccgacgaa
gaggaccgctacatcaaggcgcaggccaactcgccgctcaaccccgacggcaccttcgcc
gaggagaaggtgctggtccgcaccaagggcggtgagatcgagtacctgccgccggaggag
gtccactacatggacgtctccccgcggcagatgacctcggtggccaccgccatgatcccc
ttcctggagcacgacgacgccaaccgggcgctcatgggctccaacatgcagcgccaggcg
gtgccgctgctgcgcagcgaggccccgctggtgggcaccggcatggagtaccgggccgcc
accgacgccggcgatgtgatcctggccgagaagcccggcgtggtggaggaggtctccgcc
gactacatcaccgtcctcaacgacgacggcacccgcaccacctaccgggtcgccaagttc
aagcgctccaaccagggcacctgcttcaaccagaagcccatcgtggacgagggccagcgg
gtcgaggccggccaggtcatcgccgacggcccgtgcaccgaccagggcgagatggcgctc
ggcaagaacctgctggtggcgttcatgccctgggagggccacaactacgaggacgccatc
atcctgtcccagcgcctggtgcaggacgatgtgctcagctcgatccacatcgaagagcac
gaggtcgacgcccgcgacaccaagctgggtccggaagagatcacccgggacatccccaac
gtctccgaggaggtcctggccgacctggacgagcgcggcatcatccgcatcggcgccgac
gtcgtccccggcgacatcctggtcggcaaggtcacgcccaagggtgagaccgagctgacc
cccgaggagcggctgctgcgcgccatcttcggcgagaaggcccgcgaggtccgcgacacc
tcgctgaaggtgccgcacggtgagcagggcaaggtcatcggcgtgcgggtgttctcccgc
gaggagggcgacgagctgccgccgggcgtcaacgagctggtccgcgtctacgtggcgcag
aagcgcaagatcaccgacggggacaagctggccggccggcacggcaacaagggcgtcatc
gccaagatcctgccggtggaggacatgccgttcctggaggacggcaccccggtcgacatc
atcctcaacccgctgggcgtgcccggccgcatgaacgtcggccaggtcctggagacccac
ctgggctgggtggccagccagggctggaagatcgagggcgacgacgccgactggaagcgc
agcctgcaggccatcggcgccaccgaggccgggccgtggaccaagaccgccaccccggtc
ttcgacggcgcccgcgaggaggagatcaccgggctgctgtcgtgcaccctgcccaaccgg
gacggcatgcgcctgatcggccccaacggcaaggccaagctgtacgacggccgcaccggc
gagcccttcaaggaccccatcgcggtcggctacatctacatcctcaagctgctccacctg
gtcgacgacaagatccacgcgcgctcgaccggcccctactcgatgatcacgcagcagccg
ctgggcggtaaggcccagttcggcggccagcggttcggggagatggaggtctgggcgctg
gaggcctacggcgccgcctacgccctgcaggagttgctgaccatcaagtccgacgacgtc
ctgggccgagtcaaggtctacgaggccatcgtcaagggcgagaacatcccggagccgggc
attccggagtccttcaaggtgctgatcaaggagatgcagtcgctgtgcctcaacgtcgag
gtgctctccagcgacggcatgtccatcgagatgcgcgacagcgacgaggacgtcttccgc
gcagcggaggagctcggcatcgacctgtcccggcgtgagccgagcagtgtcgaagaggtc
tga
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