KEGG   Thiomicrospira cyclica: Thicy_0489
Entry
Thicy_0489        CDS       T01517                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tcy  Thiomicrospira cyclica
Pathway
tcy02024  Quorum sensing
tcy03060  Protein export
tcy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Thicy_0489
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Thicy_0489
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Thicy_0489
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcy02044]
    Thicy_0489
Enzymes [BR:tcy01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Thicy_0489
Secretion system [BR:tcy02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Thicy_0489
  Eukaryotic Sec-SRP protein
   Thicy_0489
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA AAA_33 cobW ABC_tran APS_kinase 6PF2K ArsA_ATPase KTI12 AAA_31 ParA nSTAND3 SLFN-g3_helicase DnaB_C TctA YqeC Thymidylate_kin VirC1 ATPase AAA_16 Mg_chelatase ResIII Helicase_RecD AAA_24 AAA_26 AAA_14 TsaE NACHT AAA_30 AAA_28 AAA_19 AAA_17 PRK AAA_18
Other DBs
NCBI-ProteinID: AEG31262
UniProt: F6DBF4
LinkDB
Position
618633..620012
AA seq 459 aa
MFDNLSDRLAKTFKAMKGQGRLTEANIKDALRDVRRALLEADVALPVIKSFITRVHDRAL
GQEVSLALNPGQAFIKIVREQLTETMGQQVEPLSFKVEPPAVIMMAGLQGAGKTTTAAKL
AKWLTEREKKKVMLVSADVYRPAAIKQLETLASQINVKFSPSNANEDPVAIVERARMEAR
KQFADVLIVDTAGRMHVDDAMMAEIKALHQAVKPIETLFVVDAMTGQDAANTAKVFHDAL
PLTGVVLTKADGDARGGAALSIREITGKPIKFIGMGEKVDGIEPFHPDRMAGRILGMGDV
LSLIEDAENKIDQKQAQAFANKLQKTGQFDLEDFRQQLQQIQNMGGIGGLMGKLPGMGQV
KNQLQDGVAEKEFKRLEAIINSMTPHERAHPALLKGSRKKRIAAGSGMQVQDVNKLLKQF
EQMQKMMKKMSKGGMKNMMRGMAGKLPPGLGKGLGGLPK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtttgataatttatcggatcgtttagccaaaacattcaaggccatgaaggggcaaggg
cgcctcaccgaagcgaacattaaggatgcgcttcgcgatgtaaggcgtgccttgttggag
gccgatgttgcgctaccggttattaaatcctttattacgcgagtgcatgatcgcgcccta
ggtcaagaggtgtctttagcgctaaaccctgggcaagcttttattaagattgtgcgtgaa
cagttgactgaaaccatgggacagcaggttgagccgctgagttttaaagtagagccacct
gcggtcattatgatggcgggtttgcagggtgcgggtaaaaccaccaccgccgcgaagttg
gcaaaatggcttactgaacgggaaaagaaaaaggtcatgttggtatcggccgatgtgtat
cgtccagcggctattaagcagttagaaacgctagcatcacaaattaatgtcaaattctca
ccttccaatgctaatgaagacccggtggccattgtggaacgagctcgtatggaagcccgt
aagcaatttgccgatgttctgattgtcgatacggcgggtcgaatgcatgttgatgatgcc
atgatggcggaaattaaagctttgcatcaagcagtaaagccgatagaaaccttgtttgtt
gttgatgccatgaccggtcaagatgccgccaataccgctaaggtcttccatgatgctctg
cctttaacgggtgtggttttaaccaaagctgatggtgatgctcgtggtggtgcggccttg
tctatccgagaaattaccggtaaaccaattaagtttataggtatgggtgagaaggtcgat
ggtattgaacccttccatccagaccgaatggcagggcgcattttagggatgggtgatgta
ctcagcttaatcgaagatgctgaaaataaaattgaccaaaagcaagcgcaggcatttgct
aataaattgcaaaagaccggacagtttgaccttgaggattttcgccaacaactgcaacaa
atacaaaacatgggtggaataggcgggttgatgggcaagctaccgggtatggggcaggtt
aaaaatcaactgcaagacggtgtcgctgaaaaagagtttaagcgtcttgaagctattatt
aattcgatgacaccccatgagcgggcgcacccagcgttattgaaaggttcacgtaagaaa
cgaattgcggccggttcggggatgcaggtgcaggatgttaataagctgttaaagcagttt
gaacagatgcaaaaaatgatgaaaaaaatgtctaaaggcggcatgaaaaatatgatgcgg
ggcatggcgggcaagttaccaccaggcctgggtaagggcttaggtggcctgccaaaataa

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