Trachymyrmex cornetzi: 108759345
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Entry
108759345 CDS
T11212
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108759345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108759345
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
108759345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_2
TPR_14
TPR_1
TPR_CcmH_CycH
TPR_8
TPR_17
TPR_12
TPR_11
TPR_6
TPR_9
ANAPC3
BTAD
TPR_7
ARM_TT21_C
PknG_TPR
Alkyl_sulf_dimr
TPR_20
HrpB1_HrpK
DUF7017
TPR_21
DUF6584
Motif
Other DBs
NCBI-GeneID:
108759345
NCBI-ProteinID:
XP_018360229
UniProt:
A0A195EAR2
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MSDDIKILLKEARESFKQNEYLEVMKKCKKVLKKDKNNYAALVLLARSMQEVEEFKSQVS
LVLHKAVEVQPNNPLAWQGLVAHYEKAPQDHDNWGKLALAYCKLLQLDSDSPKFTHFVNK
ISEIVLRIKNDDILSEALSTLSTLREISTKEKINLIDKTLVWILSEYPNNRINKYQELYE
NVLESVIKDVDLVNRQEYYRKYLKILHDSNKLTKLLTAAQDMHTQFPQNAYPLEWLCRIY
YETETLCETKFEIDITQFYESLLKINANSEAAFIAKAVYLKRTDELIDSCNCLKQVVSLN
AQSFYAWLMLSQIYSTLYCWEETENASRQALWLIKSSLKDKFQHGIKLRLLEAISRSSNK
QKLIEARQMCEELLSVEPSIQLQVIHARTNILLDEPDTTAILSNLESQDETKLQAFILKA
LHLQKHKQYEDAINALELALENSEAWLLFGKIYWDMGDYNHSLMAFLNGVQADRNNWECM
VYLGHYYREHGNDVERSRRCYHAALQINPNSEEAGIGLSTAYRLLKNTDANIQLLQRVTM
QGTGPRWAWLQLGLHYLDQGDAGQAITALQHVIRADPNDNHCWESLADAYLVRGAHASAL
KSYQRTLQLSPESLYPMIQLANIKLLIGQHKEAKEDFESILQNDKQHILALKGLAQACLG
LARQNIEKQFLCRARENLQQASDNLIDAITIRSDLLCNWKLLGDVCYRIITLPEKYCYLR
IKSVLMKCDNTEKYVNIKGDEILMLSVRCFCRALSMQNSALLWHDLTCCYLMQLNRASTI
NKNDVAAKCYATAKHAVKLCPQSWLHWNILGVICMSVYVKNYALAQHCFIMAIDRESNNA
IAWSNLGALYLHLGDIYKANEAFSRSQRADPSYVNSWVGQGLIAEKTLRKEAMDLFRHST
QLGYHNQAALGYAHWVLTTLLNSAMKEDPLLVYVIENMHAIPAAADILTWYTEREPYDVY
ALNTHGLLLERLRLYNTAAKQFSTALKLSEDEERDMISINLARILIQIGKHEKAVALCKQ
VKCANFNSQCHLALSLFKAKQYEDSYNTYEAALHWLANTGADKANVLCAMAAIAYIFQGA
DAVKTLLFQCIQIEPPTVTGLLATAALGILHDDINLTSLVLNELKSYENHHKYGYHVVTL
SAYYQVIQGNLVQAIRILTKAIFKHPNDVRYWMRLVRVLLLDKNLDVFHKYALTALTLSR
NTTNADIVHVACASAYSHFGTKEGLRQAQKNVFTYPNNVESWANLVAALLSRSEDKDCIP
INSQWILSLISIIKSQFYVSENMSQWLLHNEKELSHLQVNKASQFK
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacataaagattttattgaaggaagctcgtgagtctttcaagcaaaatgaa
tatctagaagttatgaagaaatgcaaaaaagttttaaaaaaagacaaaaacaattatgcg
gcattagtactcttagcccgttccatgcaagaggtggaggaatttaaatcacaggtatcc
ttagtccttcacaaggctgtggaggtgcaacccaataatccattagcctggcaaggttta
gtggcacactatgaaaaagctccacaggaccatgataattggggaaagttagctttagct
tattgcaaattgttgcagttggatagcgattctcctaaattcacacattttgtgaataaa
atttcggagattgtcttgcgtatcaagaatgatgacatattgtctgaagcactgagcaca
ttgagcacattacgagaaatttctaccaaagagaagataaatctgatagataagacccta
gtgtggattttatcagagtatcctaacaatagaataaacaagtatcaggagctttatgaa
aatgtattagagtctgtaataaaagatgttgatcttgtgaatagacaagagtattataga
aaatatttaaagatactacatgattcaaataaacttacaaagttgctaacagctgctcaa
gacatgcatactcaatttccacaaaatgcttatcctttagaatggttatgccgtatttat
tatgaaacggagacattatgtgaaactaaatttgaaattgatataactcagttttatgaa
tcacttttaaagataaatgcaaattccgaggctgcatttattgcaaaggcagtatatttg
aaaagaacagatgaattaattgactcatgcaattgtttgaagcaagtagtctcattgaat
gcacaatcattttatgcttggttaatgttgagtcaaatatattccacactatactgctgg
gaagaaaccgagaatgcatctagacaagcactatggttaataaaatccagtttaaaggac
aaatttcaacatggaatcaaattgagattacttgaagcaataagtagaagtagtaacaaa
caaaaattgatagaagcgcgtcagatgtgtgaagaattgttaagtgttgagccttccata
caattacaagtgattcatgcacgcacaaatatattattggatgaacctgatactactgct
atattaagtaacttggagtctcaggatgaaactaaacttcaagcttttattcttaaagcg
ttgcatttacaaaagcacaaacaatacgaagacgctattaacgctctcgagctagcttta
gaaaattctgaagcttggttgctgtttggtaaaatatattgggatatgggagattataac
cacagtctgatggcatttttaaatggcgtccaagcagatcgcaataattgggaatgtatg
gtttacttaggacattattatcgcgaacatggtaacgatgtagaacgttcaagaagatgt
taccacgccgcattacaaatcaatccgaattccgaggaagctggtatcggactaagtaca
gcttatcgtcttctcaagaacactgatgccaatatacaattattacaaagggtaactatg
caaggtactgggccaagatgggcttggctccaactaggcttgcattacttggatcaaggt
gatgcaggacaagctatcacagcattacagcacgtgatcagagctgatcctaatgacaat
cattgttgggaatctctagcagatgcatatttggtacgcggcgctcatgcatcggcacta
aagtcgtatcaacgaacactacagctgagcccagaatccttgtatcctatgatacaactc
gcgaatatcaaactgctcattggtcaacataaagaagccaaggaagatttcgagagtata
ttacagaacgataaacagcatattcttgcattaaaaggtctagcacaggcgtgtttaggt
ttggcaaggcaaaatatcgagaaacaatttttatgtcgggcaagggaaaatctacaacaa
gcatcagacaatttgatagacgctattacaatacgcagtgatctactttgcaattggaaa
ttgcttggcgacgtatgttatagaataatcactctgccagaaaaatattgctatttaagg
attaaatctgttttaatgaagtgtgataataccgaaaaatatgtgaatattaaaggagac
gagatattgatgttatcagtaagatgtttttgtcgggcactatccatgcaaaattctgca
ttattatggcatgatttaacgtgctgttatttaatgcaactaaatcgcgcttctacaatc
aataagaatgatgtggcggctaaatgctacgcgactgcaaaacatgccgttaaactctgc
ccgcaatcgtggctacattggaatattcttggtgttatttgtatgtcggtatatgtaaaa
aattatgccctggctcaacattgtttcatcatggcaatcgatagagaatcgaacaatgca
atagcttggagcaatctgggagcattatacttgcatttgggagatatctataaagcaaat
gaagcgttttctcgatcacaacgtgcggatcctagttacgtgaatagttgggtcggacag
ggattaatcgcggagaagactctgagaaaggaagcgatggatctgttccgacattcaaca
caattgggttatcataatcaagcagctttaggctatgctcattgggtacttactactctc
ctgaattccgcaatgaaggaagatccattgttagtttacgttatcgaaaatatgcacgcg
atacctgcagcagccgacattcttacttggtacacagaacgcgagccatatgatgtttat
gctctaaatacacatggtttattattggaacgactaagattgtacaatacggcggctaaa
caattttctacagctttaaaactaagtgaagatgaagaaagggatatgatatccataaac
ttagcacgcatcctgattcaaatcggaaaacacgaaaaagcggtagcattatgcaaacaa
gtgaaatgtgcaaatttcaattctcagtgccatctagcattatctttgttcaaagccaag
caatatgaagattcgtacaatacatatgaagcagctttacattggctagcaaacactggt
gcggataaagctaatgtcttgtgtgcgatggctgcgattgcttacatattccaaggagca
gatgctgttaagactttactattccaatgtatacaaatagaaccacctactgtaactggt
ctcttagccactgctgcattaggaattttacatgacgacatcaatttgacttctttggta
ttgaacgaattaaaatcatacgaaaatcatcacaagtacggttatcatgttgtcacactg
tcagcatactatcaagttattcagggaaatctcgtccaagctattcgaatacttaccaaa
gctattttcaaacaccctaacgacgttagatattggatgcgtcttgttcgagttttacta
ttggacaaaaatttggatgtctttcataaatatgctctaacggcgttgacgctaagcaga
aatacgaccaatgctgatattgtacatgttgcttgcgcatcggcatatagtcactttggt
acgaaagagggtctcagacaagctcagaaaaatgtatttacatatcccaataacgttgag
agttgggctaatctcgttgcagctctcttatccagaagtgaggataaggactgtattcca
attaatagtcagtggatactgtcattaatatcaataataaaatcacaattttacgtttcc
gaaaatatgtcacaatggttacttcacaacgagaaagaactaagtcatctccaagttaac
aaagcctcgcagtttaaataa
DBGET
integrated database retrieval system
