KEGG   Trachymyrmex cornetzi: 108760202
Entry
108760202         CDS       T11212                                 
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
tcz  Trachymyrmex cornetzi
Pathway
tcz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tcz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108760202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tcz03041]
    108760202
Spliceosome [BR:tcz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108760202
 Complex B
    108760202
 Complex C
   U2 SnRNP specific factors
    108760202
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD TiaS_FLD
Other DBs
NCBI-GeneID: 108760202
NCBI-ProteinID: XP_018361510
LinkDB
Position
Unknown
AA seq 768 aa
MPTQELAIPQPPATENEENNVPSSQPIVGIIYPPPEVRNIVDKTASFVARNGPEFESRIR
QNELGNPKFNFLNFGDPYHAYYQHKVKEFKEGKGQEPMIGSVPGKTINLTAHQKQQEILK
QVEQPFIPKDPPTEFEFIADPPSISALDLDIVKLTAQFVARNGRQFLTNLMNREQRNFQF
DFLRPQHSLFQYFTKLLEQYTKVLIPPKDLLPRLKDEALNMDKILEQVKYRAEYLKYQEA
QRRKEEEELERERVAYAQIDWHDFVVVETVDYQQFEVGNFPAPTTPDEVGARVLMQERIE
DGEDVEMQIDSDAEEETQTRVESEKDRAKDNNQVQDMEEDSSDEDDVSPPGDTHKSKEPK
PRETNMQPPPLPPTPGNVVVKKGYDPKQHATKTTRPAAPDEYLISPITGERIPASKVQEH
MRIGLLDPRWVEQRDKHLDKLAQETVFAPGTAIEASLKQLAERRTDIFGVGDEETAIGKK
IGEEDKKKDDKVTWDGHTSSVEAATRAARANITLEEQIHQIHKVKGLLPDEEKEKIGPKP
VNRATELSHMAAAASKPQATLKAPPKPPAPKPIPVPAQPPPPPTMSMPTMGIPQPMMPQP
PMMMMAPMPPMAPRPPPLMTPAMSPFMPTPPPIQPPMNSAIGLKHPTSKPLEEEPQAKKL
RTEDSLIPEQQFLARNKDPVQINIAVPMMTEKAEWKLNGQTLNITLQISDTVATMKALIH
EQIGMPPGKQKLQYEGMFFKDNNTLAYYNLTSGNVINLLPKERGGRKK
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgcctacgcaagaacttgcgataccgcagccgccagccaccgaaaacgaggagaacaat
gttccttcgtcacaaccgattgtgggcattatttatccaccacctgaggttaggaatatt
gttgacaaaaccgccagctttgtggccaggaatgggccagaattcgaatccaggatcaga
cagaacgaattaggcaatccaaaattcaatttcttaaacttcggtgatccttatcatgct
tactatcagcacaaagtgaaagagtttaaggaaggaaaaggtcaggaacctatgattggt
tcggttcctgggaaaactatcaatctcactgcacatcaaaagcagcaggaaatcctgaaa
caagtcgaacaaccgtttatacctaaggatccaccaactgagtttgaatttattgcagat
cctccttctatatctgctttggatctagacattgtgaaactaaccgctcaatttgttgca
cgtaacgggagacaatttctgaccaatttaatgaatcgcgagcaaagaaatttccagttt
gatttcctgcggcctcagcattccttatttcagtactttactaaacttttagagcagtac
accaaggtattgattccaccgaaagatttgttgccccgtctcaaggatgaagcactcaat
atggataagattttggagcaggtgaaataccgtgctgaatatttaaaatatcaggaggca
cagagacgtaaggaggaggaggaattagaaagagaaagagtggcttatgcgcaaattgat
tggcatgattttgttgtggttgaaactgtagactatcaacaatttgaagtcggtaatttc
ccagcgcctacaacaccggatgaagtcggcgcacgcgtccttatgcaggagcgcatagaa
gatggtgaggatgtggagatgcagattgatagtgacgcagaagaggaaacgcagacccgt
gtagaaagcgagaaagatcgtgcaaaagataataatcaagtacaagatatggaggaagat
tctagtgatgaggatgatgtgtctccaccaggtgatactcacaaatctaaagaacccaaa
ccacgagaaacaaacatgcaaccgcctccgttaccgccgacaccaggaaatgtggtagtc
aagaaaggatatgatccgaaacaacatgcgaccaaaactactcgtcccgcggctccggat
gaatacttgatttcgcctattactggcgaacgtattcctgctagtaaggtgcaagaacat
atgcgtatcggattgttggatccacgctgggtcgagcagagagacaaacatctagataaa
ctggcacaggagaccgtattcgcgccaggcacagcaatcgaggcaagtctcaaacaactc
gccgagagacgtactgatattttcggtgttggtgacgaagaaactgcgattggaaagaaa
attggtgaagaagataaaaagaaggatgataaagtcacatgggacggtcatacttcgagt
gtggaagcagcaacaagagccgcgcgagctaacattacattggaagaacagattcatcaa
attcataaggttaagggtcttttgcctgatgaggagaaagagaagattggtccgaaaccg
gttaatcgtgcgaccgaactctcccatatggctgctgctgcttcaaaacctcaagctaca
ttgaaagcacctccaaagccacctgcaccgaagcctataccggtacctgctcaacctcct
ccaccgccaacgatgagtatgcctactatgggtatacctcagccgatgatgccgcaacca
ccgatgatgatgatggcacctatgccacctatggcacccagaccaccacctctaatgact
ccagcaatgtcaccgtttatgccaactccaccgccaatacagccgccgatgaattctgct
attggattaaaacatcctactagtaaaccgctggaagaagagccacaggctaagaaattg
agaaccgaagactcattaattccggagcaacaattccttgctagaaataaggatcccgta
caaattaacattgctgtacctatgatgacggagaaggccgaatggaaattaaatggacag
acattgaatattaccttacaaataagcgatactgtagcgactatgaaagcactcattcac
gagcaaattggtatgccacctggaaagcaaaagttacaatatgagggaatgttcttcaaa
gacaacaatactcttgcgtattataatttaacttcaggtaatgttatcaacctgttacca
aaggagagaggtggtaggaaaaagtaa

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