Trachymyrmex cornetzi: 108761386
Help
Entry
108761386 CDS
T11212
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcz04040
]
108761386
Ion channels [BR:
tcz04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108761386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
EF-hand_6
SieB
Motif
Other DBs
NCBI-GeneID:
108761386
NCBI-ProteinID:
XP_018363388
LinkDB
All DBs
Position
Unknown
AA seq
2064 aa
AA seq
DB search
MSEDSDSISEEERSLFRPFTRESLAAVEARIAEEEARQKELQQRRAEGEVRYDDEDEDEG
PQPDPMFEQGAPIPVRLHNEFPPELASTPLEDIDSFYHNQRTFVVISKGKDIFRFSATDA
MWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCVLMIMPTTPTIESTEVIFTGIYTFE
SAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVA
IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKNFPEDGSWG
NLTHESWARFNNNETNWYFDEAKNIPLCGNSSGAGQCLPGYTCLQGFGSNPNYGYTSFDT
FGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYD
ELQKKAEEEEAAEEEAMREAEEAALAKENKLAAREAAAAAAAAAAAAAAEAADQIVKSPS
DFSCHSYELFVGQEKGNDDNNKEKMSIRSIESIGDQRHIKQINNNHSAANKVRKVSAVPR
AANGQFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRGRCFVPPGGDRKPLVL
STYLDAQEHLPYADDSNAVTPMSEENGTIVVPVYYANLGSRHSSYTSHASRLSYTSHGDL
AFPGIRGIDSIGKQITKQEQILRNRNNKQTPANGHVADANQKNYHFEAPDIEDPMGKNKP
QDNPFIELPAQQHTVVDMKDVMVLNDIIEQAAGRRSKTPEQAVSTYYFPTDDDEEPTFKD
KLVAGMFRCIDIFCVWDCCWLWLEFQKYVSLLVFDPFVELFITLCIVVNTLFMALDHHDM
DKDMERVLKSGNYFFTATFGIEATMKLIAMSPKYYFQEGWNIFDFIIVALSLVELGLEGV
QGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLF
GKNYVDHVDYFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLA
TVVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKIAEAIDRIARFIKWIKRNILAFA
KLMRAKLTNQISDQAPGEGPSNSWKEDGIDRDGDLDLADGELDAYRDKKSAKELNQLEVA
IGDGMEFTIHGDLKNKLKRGKLCMNNTKVIANSINHHDYRLDNDYINQNEDDTISNKSYG
SHKNRAFKDESHKGSMDSLNGEEKKDASKEDLEQEEDLEDEGEEEEDRLDGEIIQADEDP
IQSSYPADCCPENCYKKFPFLAGDDDAPFWQGWANLRFKTFRLIENKYFETAVITMILLS
SLALALEDVHLQQRPVLQDVLYYMDRIFTVIFFLEMLIKWLALGFKKYFTNAWCWLDFII
VMLSLINLGAVWAGAADIPAFRSMRTLRALRPLRAVSRWEGMRVVVNALVQAIPSIFNVL
LVCLIFWLIFAIMGVQLFAGKYYKCVDANKTTLSYEIIPDRNACNTENYTWENSPMNFDH
VGKAYLCLFQVATFKGWIQIMNDAIDSREIDKQPIRETNIYMYLYFVFFIIFGSFFTLNL
FIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGNKKPLKAIPRPRWRPQAIVFE
IVTDKKFDMIIMLFIGLNMLTMTMDHYQQSETFGNVLDYLNMIFIVIFTSECLMKIFALR
YHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGI
RTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVYNFKTFGQSMIL
LFQMSTSAGWDSVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAYLLSYLVISFLIVINM
YIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSDFLDVLEPPLQ
IHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFARKGNPIEETGDLGEVQARPDEAG
YEPVSSTLWRQREEYCARLIQNAWRKHKQQRLGGPSEESDDPDTDLCVRQTKVLVESDGY
VTKNGHRVVIPSRSPSVTSRTADV
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactctatatcagaggaagaaagaagtttgttccgtccgttcacg
cgggagtccctggcagcggtcgaggctcgcattgccgaggaagaggccaggcagaaagag
cttcagcagagaagagcggaaggcgaggttcgatatgacgacgaggacgaggacgaaggt
cctcagccggatcccatgtttgagcagggagcgccgatcccggtccgactgcacaacgaa
tttccacccgagttggcctccacacctctcgaggatattgatagcttctaccacaatcaa
aggaccttcgtcgtcattagcaagggaaaggatatattcagattctcagcgacggacgcg
atgtggatgctcgacccgttcaaccctatacggcgtgtggctatatacatattggttcac
ccgctcttctcccttttcatcatcactacaatattggttaactgtgtactcatgatcatg
cccaccacgcccaccatcgagtccaccgaagtgatatttacgggcatctacacatttgag
tccgccgttaaggtgatggcgaggggtttcattctgcagccttttacctatcttagagat
gcatggaattggctcgacttcgtagttatagctttagcttatgtgacgatgggcatagat
ctaggcaaccttgccgctctcaggacatttcgagtcctccgagccttgaagactgtcgct
attgtaccaggtctgaaaaccattgtcggcgctgtgatagaatccgtgaagaacctgcgc
gatgtgataatcctgacgatgttctccctctccgtctttgcgctgatgggccttcagatt
tacatgggggttctcacgcaaaagtgtataaagaactttcctgaggacggctcctggggt
aatctcacccatgagagttgggcgcgattcaataataacgaaactaattggtattttgac
gaagcgaaaaatatacccttatgcggaaattcatcgggggcggggcagtgccttcccgga
tacacgtgtttacaaggattcggctctaatccgaattacggttacacgagcttcgacact
tttggttgggcattgctctccgcctttcgtctcatgactcaggattattgggagaatctg
tatcaattggtgctaagatcggccggaccatggcacatgctcttcttcatcgtgatcatc
ttcctcggatccttctatctcgtcaacttgatcctcgctattgtcgcgatgtcatacgat
gagttgcaaaagaaggccgaagaggaagaagccgccgaggaagaagctatgagggaagct
gaggaagctgcattagcaaaggagaacaaactcgcggcgcgggaagctgcggccgctgca
gcagccgctgcggcagccgccgctgcggaggctgcggatcagatcgtcaaatccccgtca
gatttctcgtgtcacagttacgagctgttcgtcggtcaggaaaagggcaatgatgacaac
aataaggagaagatgagcatacgttcgatcgagtccatcggcgatcagaggcacatcaag
cagatcaacaacaaccacagcgctgccaataaagtgcggaaagtcagcgccgtccctcgc
gccgctaatggccagtttacttatgcctaccaggaaagcctgcggaaggcgagcctgagc
ctacccggttcaccgttcaatctgcgccgcagcagccgtggcagccaccagttcacgata
cgcaacggccgtggccgatgtttcgtaccaccgggaggcgaccgcaagcccctcgtgctg
tcgacgtacttggacgcccaggaacacctgccctatgccgacgactcgaacgcggttaca
ccgatgtccgaggagaacggcacgatcgtggtgccggtgtattatgcgaatctcggctcg
cgtcactcgtcctacacctcgcacgcctcgcggctctcctacacatctcacggtgacctg
gccttccctggtatccgcggcatcgacagcatcggcaagcagatcaccaagcaagaacag
atcctcaggaatagaaacaacaaacaaacaccggccaatggccacgttgcggatgccaat
cagaaaaattatcatttcgaagctcctgatatagaagatcccatgggtaagaataagcca
caagacaatccgtttatcgagttaccggcgcaacagcataccgtggtcgacatgaaagat
gtaatggtgctgaacgacataatcgagcaagctgccggtcgccggagtaagacgccagaa
caagcagtttcgacctattactttccgacagacgacgatgaagaacctacattcaaggac
aagttagtggccggaatgtttcgttgtatcgacatcttttgcgtctgggattgctgttgg
ctttggctcgagtttcaaaagtacgtgtccctgttggtctttgatccattcgtagagctc
ttcatcacactctgtatcgtcgttaatacgctgttcatggcattggatcaccacgacatg
gacaaagatatggaaagggtactcaaatctggtaattacttcttcacggcgacattcggc
atcgaagcgactatgaagctaatagcgatgagcccaaaatattattttcaagagggctgg
aatattttcgattttatcatcgtcgctctttcgcttgtggagttgggtctcgaaggcgtg
caaggtctatcggtattacgatctttcagattgttgagagtgttcaagttggctaaatcg
tggcctacgttgaatctgctgatttccatcatgggcaggacagtgggcgcgttgggtaat
ctaacgttcgtattgtgcatcatcatcttcatcttcgccgtgatgggtatgcagctcttc
ggcaagaattacgtcgatcacgtcgattacttcccggacggtgatctacccagatggaac
ttcactgacttcatgcactcgtttatgatcgttttccgagtgttgtgcggagaatggatc
gaatctatgtgggattgcatgttggtcggtgacgtctcttgtatacccttcttcttagct
accgtcgtcattggtaacttggtcgtcctgaatctcttcttagctctgttgctcagcaat
ttcggctcatcgaacctgtcggccccgactgcggacaacgacacgaacaagattgcggag
gcgatcgatcgaatagcgcgtttcattaagtggatcaaacgaaatatccttgcttttgct
aaattgatgcgagccaaactcaccaatcagatatccgatcaggcgccaggtgagggaccg
tccaacagttggaaagaagatgggattgatcgcgatggggacctagatcttgcagatgga
gagttggacgcatacagagacaagaagagcgccaaagagcttaatcagcttgaagttgct
attggtgacggaatggaatttactattcatggagatctgaagaataaactgaagaggggt
aagctgtgcatgaacaatacgaaagttatcgcgaattcaataaaccaccacgattataga
ctggacaacgattatattaatcagaacgaagatgacactatcagtaacaaatcatatggc
agtcacaaaaaccgcgcgtttaaagacgaaagtcacaaaggcagtatggattcgttaaac
ggggaagagaagaaagatgcgagtaaagaagatttagaacaggaagaagatttagaagac
gagggtgaagaagaggaagatcgactcgacggcgagataatacaagcggacgaggatcct
attcaatcgagttacccggccgattgttgtccggaaaattgctacaaaaagtttccattt
ctggccggcgatgatgacgctccattttggcaaggttgggcaaacctgagattcaagacc
ttccggctgatcgagaacaaatatttcgagactgccgtcattaccatgatccttctaagt
agcttggccttggctttggaggacgttcatcttcaacaacgacctgtcctgcaggacgta
ctatattacatggaccgaatattcactgtgatcttcttcctcgagatgttgatcaagtgg
ctggctctaggctttaagaagtacttcacgaatgcctggtgctggctcgattttatcatc
gtcatgctatcgctcatcaacttgggtgctgtctgggccggtgcagctgacatcccggcc
ttccgttccatgagaacactgagggctttgagacctttacgagcagtctcacggtgggag
ggcatgagagtagtcgttaatgccttggtccaagccattccatccatcttcaacgtattg
ctggtatgccttattttctggcttatatttgctatcatgggagtgcagctgtttgctggc
aaatattataagtgtgtcgacgcgaacaagacgacgctcagctacgagataataccggac
cgtaacgcttgcaacaccgagaattacacgtgggaaaattcgccgatgaatttcgatcac
gtcgggaaagcgtatctgtgcctattccaagtggcgacttttaaaggatggattcaaatt
atgaacgatgcgatcgactctagagagatcgataagcaaccgattcgcgaaacgaacatt
tacatgtatctctacttcgtgtttttcattatatttggatcgttttttaccctcaatctg
tttatcggagtgatcatcgacaattttaacgagcaaaagaagaaagctggcggatccctt
gagatgttcatgacggaagatcagaagaaatattacaatgccatgaagaaaatgggcaat
aagaagcctctaaaagccattcctcgaccgaggtggcggccgcaggcaatagtgtttgaa
atagtgacggacaaaaagttcgatatgataatcatgttgttcatcgggctgaacatgctc
acgatgacgatggaccattatcagcagagcgaaaccttcggcaatgttctggactatctc
aatatgatattcattgtgatattcaccagcgagtgtctcatgaagatcttcgctcttcgc
taccactatttcaaggagccatggaatctctttgattttgttgttgttatattgtcaata
ttaggtctggtgctcagcgacattattgagaaatatttcgtgtcgccgactttgcttcgt
gtagtgagagtggcaaaagtcggccgtgtgcttcgactcgtaaaaggtgccaagggtatc
cgaacccttctcttcgccctggcgatgtcgttgccagccctcttcaacatttgcctactg
ctatttttggtgatgtttatcttcgcgatattcgggatgtctttcttcatgcacgtcaaa
gacaagagcggactggatgacgtgtacaatttcaagacatttgggcagtcgatgatactg
ctatttcagatgtcaacctcggccggttgggacagtgttctcgacggtataataaacgag
gaggactgccaggagccgaacaacgagatcggctacccaggcaactgtggatcctcgacg
atcgggatcgcttacctgctctcgtatctcgtgatcagcttcctgatcgtcatcaacatg
tacatcgccgtgatcctcgagaattactcgcaggccaccgaggacgtgcaggagggtcta
acggacgacgactacgacatgtactatgagatttggcagcagtttgatccggacggcacg
caatacatcagatacgaccagttatcggacttcttagatgtattggagcccccgttgcag
atacataagcccaacaaatataagatcgtgtcgatggatatccccatatgtaagggagac
cttatgttttgcgtggatatcctcgatgccctcaccaaggactttttcgcacggaagggc
aatccaatcgaagagacgggcgatctgggcgaggtccaggctcggcccgacgaggccggt
tacgagccggtctcgtccactctatggcgacaacgcgaagagtactgtgcccgtcttata
cagaacgcctggcggaagcacaagcagcagcgtcttggcggaccgagcgaggagagcgac
gacccggataccgatctgtgcgtccggcagaccaaggtgctcgtcgagagcgacggctac
gtcacgaagaacggtcaccgcgtcgtaatacccagccgatcgccgagcgtcacttcgaga
accgcggacgtctga
DBGET
integrated database retrieval system
