Trachymyrmex cornetzi: 108764595
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Entry
108764595 CDS
T11212
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04382
Cornified envelope formation
tcz04512
ECM-receptor interaction
tcz04518
Integrin signaling
tcz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108764595
04518 Integrin signaling
108764595
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108764595
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108764595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcz04147
]
108764595
00536 Glycosaminoglycan binding proteins [BR:
tcz00536
]
108764595
Exosome [BR:
tcz04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108764595
Glycosaminoglycan binding proteins [BR:
tcz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108764595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108764595
NCBI-ProteinID:
XP_018368404
LinkDB
All DBs
Position
Unknown
AA seq
1976 aa
AA seq
DB search
MTRLGLRFVASAVCLAGIVSGQLNHTSWPNPPPVVPLDRGDIGRPTNGSDDDYGSSPDFK
YLGKGFITDNEGYEDAERRNGSFTSGNYSPDERAYPPFFWNRNRSDPHGQSSSGRSPYDR
ASPGYDRYPDGGGTPGSGIDENRPGGYLDGHGDYDTYSGAGESERGGGSYSYGQGSSGDS
YSSNYGGTYGAGGPDSYGRGSGSAYGGSRGSGQVYGGSRGSDDAYGGRGRGYGGYGAAGD
DENYPSNYQVVPMPGAPRNCTGSGCCAPKCFAEKGSRGPPGIIGPQGPKGQRGFPGAEGL
LGSKGEKGDPGPQGPHGAKGDRGKMGMPGFPGINGIPGVQGPPGSPGVPGHDGCNGTDGD
RGRDGVPGEPGPRGLRGLPGSKGEKGQPAYAGAFPVGQKGEPGMDGVRGPPGPPGYQGER
GLSGSKGERGPYGAPGILGPKGEKGNMGLGFEGLKGDKGQKGEPGPPGSTAPIMPFEGVS
EVTGPPGETGYKGDKGEMGPEGQKGEPGFIGDHGIPGGLGQKGEKGLPGAPGIRGRDGFS
GPPGPPGRKGDRGIDGLEGLSGRPGKKGEPGRDGTMGVSGLRGPPGPPGGGKGRPGPPGP
KGPRGFPGPTGPRGTDGFPGDPGPRGPIGLQGGPGSNGIPGPEGLPGEKGGKGEPGLTGF
PGGPGPRGFDGPPGAVGPRGPPGDKGFSIMGPKGTDGTPGFDGEKGQKGERGYAGVRGRP
GDSLDGIPGAPGAPGEPGEAGAPGRDGVPGLSGALGEKGDIGGRCIDCIPGLRGAKGDRG
FDGTPGLTGPRGPPGERGFPGEAGVDGLPGTIGPPGLPGKDGIPGAPGPQGEPGTPATVT
WNMLKLEKGDKGARGEPGRQGPPGPEGPSGEKGRPGFEGFPGLKGTPGDRGFPGQDGVPG
RPGTPGRKGEKGLSVKGEPGESGRPGFSGQKGEPGLYGFKGEPGQCPPLDLMKGFKGDRG
LTGDKGEPGPPGRDGLPGDKGLQGFSGPPGTPGPIGAPGPVGPRGLPGPRGDKGNMGPMG
FPGEPGREGPRGFPGAPAPKGEKGELGISVKGSPGLTGPPGEKGEKGLPGPPGKEGPRGY
QGLAGFAGEKGDMGPPGINGLPGAPGAKGDTGPIGPPGPPGVAGIPGADGIKGEPGLPGE
PGRGGLPGFPGTKGDRGESGIDGPKGYPGRRGLPGTAGRPGADGLPGLKGERGDKGLPGF
PGLPGMEGKPGRPGISGLKGDQGLPGISGAPGNIGYDGIKGDTGLPGLPGRKGEPGQVSE
KGQKGEPGMPGIRGPLGPPGRDGIDGAKGEPGKPGIGRDGLPGLKGESGVPGRDGLPGFQ
GQKGDTGVRGFPGIKGDYGPPGTPGEPGPPGIDGLPGEVGEIGPQGVPGFPGVDGEMGPP
GRPGLDGIKGDRGLQGLVGLPGIQGALGEKGDRGPPGPTIQIKGEKGEPGIPGFSGENGE
KGNQGVTGIPGYDGEKGDRGLAGFEGSPGPHGAPGSKGEQGPAGIPGIPGVTIKGEKGLP
GLLGKHGRDGFSGRPGEKGEPGLPGLPGPKGDIGPYGPVGPQGEKGDQGLSGLTGPPGRD
GNSGLEGAPGSPGERGQKGDQGPPGLFGAPGQKGEPGFPGPNGLDGPQGEKGERGWDGVN
GLPGPIGQKGDRGYPGAVGLMGAVGYVGEKGEKGEDCLEPPMGPKGDRGYPGSTGPPGPQ
GEKGLSGPPGFSGVDGIKGAQGFIGPPGPPGLSGLPGPVGTPGLPGLQGPVGAPGLIGVP
GAPCETTPDYLTGILLVKHSQSQSLPICEPGHIRLWEGYSLLYTDGDERAHSQDLGYAGS
CVRKFSTIPFLFCDVNNVCHYASRNDRSYWLSTNSPIPMMPVEEAAIEEYISRCVVCEVP
ANVIAVHSQTISIPECPAGWTGLWIGYSFVMHTGAGSQGGGQSLSSPGSCLEDFRATPFI
ECNGAKGHCHYYSNQYSFWMVTIEDGQQFRSPEKQTLKAGNLRSRISRCQVCIKNT
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtctgcctggccgggattgttagt
gggcaattaaatcacacatcatggccgaatccaccaccggtcgtgccgctggatcgaggt
gatatcggaaggcctacaaacggtagcgatgatgactacggcagttcgccagatttcaaa
tatttaggcaaagggtttattacggacaacgaaggatacgaggatgcggaaaggcggaac
ggcagtttcacgtctggtaattacagtcctgacgaaagggcctatcccccattcttttgg
aacagaaacagaagcgatcctcacggtcaatcttcctcgggccgatctccttacgataga
gcatcgccgggctacgacaggtatcctgacggcggcggcacgccaggatccggaattgac
gaaaatcgaccaggcggttacctcgatggtcacggcgattacgatacatacagtggtgcc
ggtgaaagtgagcgaggaggaggttcttatagttacggtcaaggaagttctggtgattct
tatagtagtaattatggaggaacttatggtgcgggaggtccggattcctatggccgtgga
agcggaagtgcttatggtgggagtcgcggaagtggacaagtttacggcggcagtcgtgga
agcgatgacgcttacggtggtcgtggacgcggttatgggggttacggtgccgctggagat
gacgagaattatccgagcaattaccaggtggtacccatgcccggagcaccgcgaaactgc
accggatcgggatgctgcgcgcccaagtgtttcgccgagaagggatcgcggggaccacca
ggaataatcggaccgcaaggacctaagggacaacgcggatttccaggagcagaaggtctt
ctaggatccaaaggtgagaagggagatcctggtccacaaggtccacacggcgcgaaaggt
gatagaggaaaaatgggtatgcctggttttcctggtataaacggtatacctggagtacaa
ggacctccgggttctcctggcgttcctggtcatgatggttgtaacggaacggatggtgac
cgtggtcgtgatggtgtacctggagaaccaggacctcgcggtcttcgaggtctacctgga
tctaaaggagaaaagggtcaaccagcgtatgctggtgcttttccagtgggccaaaagggt
gaacctggtatggatggtgtaagagggcctcccggtcctcctggttatcaaggagaacgc
ggtctatctggttcgaagggtgaacgaggcccctacggtgcccctggcatactaggtcct
aaaggagaaaaaggaaacatgggtcttggatttgaaggattaaagggagacaaaggtcaa
aagggtgaaccaggacctccgggttcaactgcgcccatcatgccattcgagggagtctcg
gaagtcacgggtccacctggagaaacaggttataaaggagataaaggtgaaatgggacca
gaaggacaaaaaggagaaccgggattcataggtgatcatggtatacctggaggattagga
caaaaaggagaaaagggtcttccaggagctccagggattcgtggtagagatggtttctct
ggacctcctggacctcctggacgaaaaggtgatcgaggtattgacggattggagggactt
tctggacgacccggcaagaaaggagaacccggtcgagatggaacgatgggtgtttcaggt
ttacgaggacctcctggaccaccaggaggtggtaaaggaagacctggaccaccaggtccg
aaaggaccacgtggttttccaggacctactggaccacgaggaacagacggtttcccagga
gatccaggaccgagaggacctataggtttacaaggaggtcctggatcgaatggaattcca
ggtccagaaggtttgccaggagaaaagggtggaaagggtgagcctggcttgaccgggttc
cccggaggtccaggaccacgtggatttgatggaccacccggagcagtgggacctcgagga
ccgccaggagacaaaggattctctataatgggaccgaaaggaacggatggaacacctggc
tttgatggagagaagggtcaaaaaggcgaacggggttacgcgggggtacgtggtcgacca
ggagattctctagacggcattccaggagcaccgggtgcacccggtgagccaggagaagcc
ggagcgccaggaagagacggtgtaccaggtctttctggagcgcttggagagaaaggagat
atcggcggtcgttgtatagattgtataccgggattgcgaggcgctaaaggagatcgtggt
ttcgatggtacgcccggacttaccggtcctcgagggccacctggagaacgcggtttccct
ggagaagctggagtggatggtttgccaggcacaatcggacctccaggactaccgggaaaa
gatggtatacccggtgctccaggacctcaaggagagcccggaaccccagcaaccgtgaca
tggaatatgcttaaattagaaaagggtgataaaggagcgcgtggagagcctggtcgacaa
ggcccaccgggaccagaaggaccttcgggagaaaagggtagacctggattcgaaggtttc
ccagggcttaaaggaacgccaggagatcgtggattccctggacaagatggtgttccagga
agaccaggaacgcctggacgtaagggagagaaaggattaagtgtaaaaggtgaacctgga
gaatcaggtcgaccaggattttcaggacagaaaggagaacctggtttgtacggatttaag
ggtgaacctggtcaatgtccaccactcgaccttatgaaaggtttcaaaggtgatcgaggt
ttaactggtgacaaaggagaacctggaccacctggcagggatggattacctggtgataaa
ggattgcaaggtttctcgggtccacccggtacacctggtccaatcggtgctcctggacct
gtgggtccaagaggtttacctggtccgcgtggtgataagggtaacatgggtcctatgggt
ttcccaggagaacctggtcgagaaggacctaggggtttcccgggtgctccggctccgaag
ggtgaaaaaggagaacttggaatatcagtcaaaggtagtcctggtctaacaggtcctccg
ggtgaaaagggagagaaaggtcttcctggaccaccaggaaaagaaggtccacgcggttat
cagggattagcaggctttgctggcgagaaaggagacatgggtccaccgggaataaatggt
ttgccaggagcacctggtgcaaaaggagacacaggtccgattggcccacctggtcctcca
ggtgttgctggtattccaggagcggatgggatcaaaggtgagccagggttaccaggagaa
ccaggtagagggggtcttccaggattcccgggaacaaaaggggatcgcggtgaatcaggt
atcgatggaccgaaaggatatcccggcagacgaggattacctggtactgcaggtagacct
ggagctgatggtctaccaggtttaaagggcgaacgcggtgacaaaggtttaccaggattc
cctggattaccaggtatggaaggaaagcctggtcgtcctggcatatctggattaaaagga
gatcaaggactacctggtatatctggtgcgccaggaaacatcggttacgacggaattaag
ggtgatactggtctaccgggtctaccgggtaggaaaggagaaccaggacaggtctcagaa
aaaggacagaaaggtgagccaggaatgcctggaatacgaggtcctttaggccctccagga
cgagatggtattgatggagcgaagggcgaacctggaaaaccaggcattggcagagacgga
ttgcctggattaaagggtgaatcgggcgtaccaggtcgggatggattaccaggattccaa
ggtcaaaaaggtgacactggtgtaagaggattccctggaataaaaggcgactatggtcca
ccgggtacacctggagaacctggtccgcccggtatagacggacttcctggagaagttggt
gaaatcggaccacagggagtacctggtttccctggagttgatggcgagatgggccctcct
ggccggcctggactcgatggtattaaaggagaccgcggtttacaaggactcgtcggattg
cccggtattcaaggagcattaggagaaaagggagatcgtggtccgccaggacctacaatc
cagattaagggtgaaaagggtgagccaggtattcctgggttttctggagaaaacggagag
aaaggaaatcaaggtgtaacaggtatccctggttatgacggtgaaaagggcgacagaggt
ctagctggattcgaaggatctcctggacctcatggtgctcccggatctaaaggtgaacaa
ggacctgctggtattcctggaattcctggagttacgataaagggcgagaaaggtttgcct
ggtctattgggtaagcacggtagagacggattttcaggacgacctggcgagaagggtgaa
ccaggattgcctggtttgcctggaccaaaaggagacattggtccttatgggccagttgga
cctcaaggtgaaaaaggtgatcaaggactatcaggtttgactggacctccaggacgcgat
ggcaattcaggtctcgaaggtgcacctggatcacctggtgaaagaggtcagaagggtgat
caagggccgcctggattattcggtgccccaggacaaaaaggagaacccggttttccagga
ccaaatggattggacggacctcaaggagaaaaaggtgaaagaggttgggatggtgtaaat
ggtctacctggaccaattggtcagaagggtgatagaggatatcctggtgcagttggatta
atgggtgcggttggttacgtaggtgagaaaggtgaaaaaggtgaagactgtctcgagccg
ccaatgggacctaaaggagatcgcggatatcctggttcgactggaccgcctggtcctcag
ggagaaaaaggactttcgggtccgcccggtttctctggcgtagatggcattaaaggcgcg
caaggttttatcggtccaccaggacctcctggactatcaggattacctggacctgtcggt
acacccggtttaccgggtcttcaaggtcccgtcggtgcgccaggactcatcggcgtgccc
ggtgcaccttgtgaaacgacacctgattatctcaccggtatccttctggtcaaacacagc
caaagtcaaagtctgccgatttgcgaaccgggccatataagactctgggaaggatacagc
ttgctctacactgacggcgatgagagagcgcactctcaagacttaggttatgccggctcg
tgtgtaagaaaattctcaacgatacccttcctgttctgcgacgtcaacaacgtctgccat
tacgctagtcgcaatgatcgttcttactggctatctaccaatagtccaattcccatgatg
cccgtcgaagaggcggcgatagaagaatatatctccagatgtgtggtatgcgaagttcca
gccaatgtgatagcggtacacagtcaaacgataagcattccagaatgtccggcgggatgg
accggtctttggatcggttatagttttgtaatgcacaccggcgcaggttcccaaggcggc
ggccagtccctgtcgagtcctggttcctgcctggaggacttccgcgccacaccgttcatc
gagtgcaatggcgccaaaggacactgccattactattctaatcagtacagcttctggatg
gtgaccatagaagacggccagcagttcaggagccccgaaaaacagaccctaaaggcgggc
aatcttagatcccgaataagtcgctgccaagtttgtataaagaatacataa
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