Teleopsis dalmanni (Malaysian stalk-eyed fly): 119674671
Help
Entry
119674671 CDS
T09311
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119674671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119674671
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119674671
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119674671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
CNOT1_1st
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
119674671
NCBI-ProteinID:
XP_037941748
LinkDB
All DBs
Position
2:22064228..22082765
Genome browser
AA seq
2461 aa
AA seq
DB search
MNLDHLKLTLTQIGILVKQLNKKNFAETSENINQIIDEFGLEADRHCLRCLFSIINFADA
TSLTTQVQANFLGVQLEKQLTRAPVISNICFAIDNCFPTQKTLKPTAQLIPQIVKLTGIN
KLCESVLSLALTHSSQSDLRKFANENLKKAFPELIESYLGKSKATAALVSSLYDVSLDLL
QLLLVSLDEYVPTELVWQFLKKLQEEFPLERVPLILAPFLYRVSATNCVDELNINQINGE
GEVLTEIGIEEIYDNLCETFLTTQGNCIMDTSWINLILEIGYEFTSSVDECKNHLRCGSR
DLQPQDVAKIIGLMCRRQSSILDCNVNLPTPANFWPGQPAQQQQNVANNNDGSSISSLDK
STNSSDKKDKSASSSGSSISTNETTQAWKPDVFVQALKEVVPQLSWKDVFLGLDHQEFVL
KDRIGLDLLLTIFRLGTQTAVFPYPDCIYRHWQNVEAQFSLVAVMLKNPDIFSFADYIFS
SSPVELLKTAPDIENKEICTWKSLHLIDVLLYVADQGYYSQVHEIFKFPMQQCPDVLFLS
LLHLSPPLTALRQELFNQLIPTFLTNHPNSSVILASAWNSVNFGHSIRSVIMHAMSEWYL
RGTEYDQVKLSRILDVAQDLKALSTLLNARSFLFVIDLACLASRREYLKLEKWLGDKIRE
HGEAFIQSMIKCLQRRCPQIANAKIPNDQLPPKPAQLPPETISTMLSCLQSCIGSVPPEV
AEIIMQMSTNCSIIANKARAAQQQGPQGPQGLVPLQGVMRGLRGMEMGGGVPGVPPPSFS
GNINAQTGFGPTMDAISNLSTNVGNLNLNGPNGAFNFGNALGNLVSTPASPSRLMNPTPI
PYSMMQVQGGPPNVNSLNRMPPAAPQPTPPNPNNPVMGDLQTPVSKEVEDEANSYFQRIY
NHPPHPTLTIDEVLDILQRFKESNNRREQEVYLCMLRNLFEEYRFFPHYPDKELQITAQL
FGGIIERNLVPTFVAMGLALRCVLDALRKPEGSKMYYFGITALDRFKTRLHTYDKYCEFI
RSIPHFQEFPPHLIHYVECGFLSQEPNPAKLQMLMAAAAANNSAPQQPTSESVYRSNSVT
GNVVTTPTQQKMVVAQSIHASRVKSIATATNIDTLLVANQEEKITVPPEAVQDKTAFIFN
NLSQLNIPQKCEEIKEIMTKDYWPWLAQYLVLKRASMEFNFHHLYYNFLEALKNADINKF
VTKETLRNIKVLLRCDKGMGNFSDRSLLKNLGHWLGMITIGRNRPILQLDLDLKSLLAEA
YHKGQPELLFVVPFVAKILESTHKSKVFKSPNPWTMGIMNVLGELHQEPELKLNLKFEIE
VLCKTLGLDLTKLKPIIYLKDPSRSINIEHQMSQPKPKIIDSAPSTQQQQTQQLQHAPPQ
QPQPQITNEVDAQAMLISAANNVPGGAIPSPSIANETTGQVMIPAPEPRYSYLEINVANF
QMVAPHIVMSPNITFLHANPAFKHILLNAIERTITEWMQPVVDRSVRIAASTTEHIVRKD
FALDADENRMRIAAHQMVRNLAAGMVMITCKDQLLQSLNSNVRKAFLATVSGSPSYQEIE
SASLQLASDNVEIACAFIQKTAAEKSTPEIDRRLAPDFETRKIAREEGSRFFDPQTLAYQ
TERMPEHIRLKVGGVPPAQFAVYTEFARNIPGFQLLSDRDVALYLPKPQDMPPAFATDEL
GLIYAELASKMETFLNSTVNISSLQLQASKMHTLLNSLMVTRRIRDNDSALVLLTRTVEG
LIEGLINVPEHVEQMKLYRDIHLRILSILQNTFGVPSTERAITKCLFDIREDVRYNVDAV
KLLLTSHFVNVSQFDALLRETMDNGNNYLAVSFAMTLMERLLVDERSSPMVAETEFITTI
EMLARLSQHRHRYPEALTHLIDMLWGGSSNAEPGQFLASDRFLSGATQYIHSGMQHVRSN
DCEDPPGLQEKTEFLLKDWVSIYSQSNTVTRETKNFGSFVQKMNMYGILKTDDLITRFFR
QATQFCIDLVYRILSDQTHNPAQVKAKIFHWIDAFVHLIALLVRHSGEAGNPTTKINLLN
KVLGIVLGILLKDQDIRGNTFSQLGYHRFFLMLFLELSVPDTVLESLMHSIVTAFSHTYH
LLNPVSAPGFCYSWIELISHRTFIGRILAQIAQQKGWPLYAQLLMDLFNFLAPFLRNAEL
AKPVQIMYKGTLRVLLVLLHDFPEFLCDYHFGFCDVIPPNCIQMRNIILAAFPRNMRLPD
PFTPNLKVDMLNETATAPKICSNYVTNIQPGNFKKDLDSYLKARAPVTFLSELRSHLQIS
NEPGSRYNIPLMNALVLYVGTQAIAHIRSKNCVPSTSNIAHSAHMDIFQNLAVDLDTEGR
YLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANTEVIQEQITRVLLERLIVNRPHPWGLL
ITFIELIKNPIYKFWDHDFVHCAPEIAKIIRYISNIQPLRPNWRTENINGKRLANNAFTL
W
NT seq
7386 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagaccatctaaagttaacactgacgcagattggtattttggtcaaacaattg
aataagaagaattttgctgaaaccagcgaaaatataaatcagattatcgacgaatttggt
ttggaggcggatcgccattgtctgcgttgtttgttttccataataaactttgcagatgcg
acatctttaaccacacaagtacaggcaaactttctaggcgtacaattggaaaaacaactg
accagggcaccagtcatatcgaatatctgttttgcaatagataactgttttccaacacaa
aaaacacttaaaccaacagcacaactaattccgcaaatagtcaagttaactggcatcaat
aaactttgtgaaagtgttttatccttggcactaacacattcttcacaaagtgatttgcgt
aaatttgctaatgaaaatttaaaaaaagcctttccggaactaatcgaatcataccttggg
aaaagtaaagctacagcggctcttgtcagcagcttatatgacgtatcactcgatttatta
caattattgctagtttcattagatgagtacgtacccacggaattggtgtggcaatttttg
aaaaagctgcaagaggaatttccccttgaacgtgtaccattgattctggcaccattttta
taccgtgtctccgcaactaattgcgttgatgaattaaacataaatcagattaatggagag
ggtgaagttttgacagaaattggaatagaagagatctatgataatttatgtgaaacattt
cttacaacccagggcaattgtattatggacacatcctggattaatttaatcctggaaatc
ggatatgaattcacatcaagtgttgacgaatgtaaaaatcatttgcgctgtggttctcga
gatcttcaaccacaagatgtggctaaaattattgggctcatgtgcaggaggcagagctct
atactcgattgcaatgtaaatttaccaactccggccaacttttggccaggccaaccggca
caacaacaacaaaatgtagcaaacaataatgatggatccagtataagcagtctagataag
tctacaaattccagcgataagaaagataaatctgcaagtagtagtggtagttcaatttca
acaaatgaaaccacacaagcatggaaacctgacgtgttcgtacaggcattaaaagaagta
gtacctcagttgagttggaaagatgtatttttaggtcttgatcatcaagagttcgtactt
aaagaccgaattggtttagatcttcttcttaccatatttcgcttaggcacacaaaccgca
gtatttccatatccagattgcatttatcgtcattggcaaaatgtggaagctcagttctcc
cttgtagcagtgatgttaaaaaatcctgatatattttcatttgctgactacattttctca
tcgtcgccagtcgaactgcttaaaacggcaccagatattgaaaacaaagaaatatgtact
tggaaatcgttacacttaatagatgtattactatatgttgcggatcaaggatactacagt
caagtacatgaaatatttaaatttccaatgcaacaatgtccggatgtgttatttttatca
ttgctgcatctttcgccgccactgacagctttacgtcaagagttatttaatcagttaata
ccaacatttttgacaaaccatccgaattctagtgtaatattagctagtgcatggaattct
gtaaattttggacattctataagatctgttattatgcatgctatgtccgaatggtatttg
cgtggcacagaatacgatcaagtaaaattatcacgcatattagatgtggcgcaggatttg
aaagcactgtctacacttttgaatgcacgttcttttttatttgttattgatttggcatgt
ctggcatctagaagggaatatttaaaacttgaaaaatggcttggtgataaaatacgagaa
catggcgaagctttcatacaatcaatgataaaatgcttacaacgcagatgccctcaaata
gcaaacgccaaaatacccaacgatcaactgcctccaaaaccggcacaactgccacctgaa
acaatatcaaccatgctgtcttgtttacaatcatgcattggaagtgtgccacctgaagtt
gcagaaattattatgcaaatgtcaacaaattgttctatcatagcaaataaagccagagct
gcacaacaacaaggcccacagggtccacaaggtttagtgccgttacaaggagtaatgcgt
ggtcttcgtggtatggaaatgggtggaggagttccaggagtaccgcctcctagcttttcg
ggaaatatcaacgcgcaaactgggtttggtccaacaatggatgctatatctaatttatct
acaaatgtaggaaatttgaatttaaatggtccaaatggtgcatttaatttcggaaacgca
ttaggaaatttggtttcaacaccagcgtccccctcacgactaatgaatccaacgcctata
ccatattctatgatgcaagtgcaaggaggcccaccaaatgtaaacagtttaaatcgtatg
cctccagcagctccacagccaacaccgcctaatccgaacaatccagttatgggtgatttg
caaacacctgtttcaaaagaagtcgaagatgaagcaaattcgtattttcaacgcatttac
aatcaccccccacatccaacgctcacaattgatgaagtgctcgacatattacagcgattt
aaagagtcgaataatcgacgtgagcaggaagtgtatctttgtatgctgagaaatctcttc
gaagaatatcgctttttcccacattatccagacaaagaattacaaataacagcacagctc
tttggtggtattatcgaacgaaatttagtacccacatttgtagctatgggactagcttta
cgctgcgttttggatgcgttgcgcaaacctgaaggttcaaaaatgtattattttggtata
acggcactcgatcgttttaagactcgtttacacacatatgacaaatattgtgaatttata
cgttctataccacactttcaggaatttccaccacatttaatacattacgtagaatgtgga
tttctttcacaggaaccaaatccagcaaaactacaaatgctaatggcggcagctgccgcg
aataactcagctccacaacaaccaacatctgagtctgtatatcgcagcaattcagtaact
ggaaacgtggttacaactccaacacagcaaaaaatggtggtggctcaatcaattcacgcc
tcccgcgtaaaatctattgctacagcaacaaatatcgacacgcttttagttgctaaccaa
gaggaaaaaatcacggtacctccggaggccgtgcaagataagaccgcttttatatttaac
aatttaagtcagttaaatataccacagaaatgcgaagaaataaaggaaataatgacaaag
gactattggccgtggttagctcagtaccttgtactaaagcgcgcttcaatggaattcaat
tttcatcatttatactacaattttttagaagcattgaagaatgccgatatcaataaattt
gtaacaaaggaaacattgaggaatataaaagtgttgctgcgctgcgataaaggcatggga
aatttctcagacagaagtctcttaaaaaatttgggtcactggcttggtatgataactatt
ggtagaaatcgtccaatactccaactcgatttggatttaaaatcgctgctagctgaagcg
tatcataaaggtcaacctgaattattgtttgtggtaccgttcgttgccaagatcctggaa
tcaacacataaatcaaaagtttttaaatctccaaatccatggactatgggtattatgaat
gtgttaggtgaacttcatcaagagcctgaactaaaactaaatcttaagtttgaaatagaa
gtgctttgtaaaacgcttggtttggatttaacaaaactaaaaccgattatatacttaaag
gatccatcgcgctcaataaatatagaacatcaaatgtcgcaaccaaaaccaaaaataata
gatagcgctccatcgacacaacaacaacaaacgcagcaactgcaacatgcgcctccacaa
caaccacaacctcaaattactaatgaagttgacgctcaagcaatgctaataagtgcagca
aataatgtaccaggaggtgcaataccatctcccagtattgctaacgaaacaacagggcag
gtgatgataccagcaccagagccacggtattcgtatttggagataaatgttgcaaatttc
caaatggttgcaccacatatagttatgtcacctaatataacttttttgcatgcaaatcca
gcttttaaacatattttgttgaacgccattgaacgtaccattaccgaatggatgcaacca
gttgtagaccggagtgtacgtattgctgcgtccacaaccgagcatattgtgcgcaaagac
tttgcgctagatgcagatgaaaatcgtatgcgcattgcagcacatcaaatggtccgaaac
ttggccgctggcatggtaatgattacttgcaaagatcaactattgcaatcccttaatagt
aacgtgcggaaggcatttttggcaactgttagtggtagcccctcatatcaggaaattgaa
agtgcatctctgcagttggcgagtgacaatgtagaaattgcttgtgcgtttatacagaaa
acagcagctgaaaagtcaactccagaaattgatcgacgcttagcgccagattttgaaacg
agaaaaattgcacgagaagagggaagtcgattttttgatcctcaaacgttggcctatcaa
acggagcggatgcctgaacatatacgacttaaagtcggtggagttccaccagcgcaattt
gctgtatatacagaatttgctaggaatatacctggattccaacttttgagtgatagagac
gtagcattatatttgcctaagccacaagatatgccaccagcttttgccacagatgaactc
ggtcttatatatgcggaattagccagtaaaatggaaacatttttgaatagcacagtcaat
atttccagtttacaactgcaagctagtaaaatgcatacattattgaactcactaatggta
accagacgaatacgtgataacgactctgcgcttgtattattaacgagaacggtagaggga
ctaatcgaaggtcttataaatgtaccagaacatgttgaacaaatgaaattgtatcgtgac
atacatttacgtattttatcaatactacaaaatacatttggtgttccatcaacagagcgc
gcaattactaagtgtttgttcgatataagagaagatgtgcggtacaatgttgatgcagtt
aaattgttgttaacatcacattttgttaatgtctcccaattcgatgcactcttacgtgaa
accatggataatggtaataattatttggccgtgtcatttgctatgaccctgatggaacgt
ttattggtcgatgaacgttcaagtccaatggtagcggaaacagaatttattaccacaatc
gaaatgctcgcacgtctatcacaacatcgtcaccgttatccagaagcattaacacattta
attgacatgctttggggtggcagcagtaatgcagagcctggacaatttttagcgtctgac
cgttttttatcaggagcaactcaatatatacactctgggatgcagcatgttaggtccaac
gactgtgaagatcctcctggccttcaagaaaaaacagaatttttgctcaaagattgggta
tccatctattcgcaatccaatactgttacgcgcgagacaaaaaattttggttcatttgtt
caaaaaatgaatatgtatggcattctaaaaaccgatgatctaataactcgcttctttaga
caagctacacaattttgcatcgatctcgtttatcgcatactcagtgatcaaacacataat
ccagctcaagtaaaagcgaaaatatttcattggatcgacgcatttgtgcatttaatagct
ttgttggttcgacactctggagaagcaggaaatccaacaactaaaattaatttattgaac
aaagtgctaggtattgtacttggaattttattgaaagaccaggatataaggggcaacaca
ttttctcagttgggttatcaccggtttttcctgatgctctttcttgagttaagtgtgcca
gatactgtgctagaaagcttgatgcatagcatagttactgctttttcacacacataccat
ctgttgaatccagtatctgcgccaggcttttgttattcttggatagagttaatatctcat
cgaacatttatcggtcgtatactcgctcaaatagcacaacagaaaggttggccgctatat
gcccaactgctgatggacttatttaatttcttagcaccatttttaagaaatgcggaattg
gcgaagcccgtacaaatcatgtacaagggaacgctccgtgttttattagtgttactgcat
gattttccagaatttctatgtgattatcattttggtttctgtgatgttatccctccaaat
tgtatacaaatgcgcaacataatattagctgcttttccacgtaatatgcgactaccagat
ccatttacacctaaccttaaagtggacatgttaaacgaaacagcaacagcaccgaaaatt
tgctccaattatgtaacaaatatacaaccgggaaattttaaaaaggatctcgactcatat
ttaaaggcgcgcgctccagtaacattcctatcggagctgcgaagtcatttacaaatatct
aacgaacccggttcacgctacaacattccgctgatgaatgctttggttttatatgtgggt
acacaagctatcgcacacataagaagtaaaaactgtgtgccaagtacttccaatattgca
cacagtgcccacatggatatattccaaaatttagcagttgatctggatactgaagggcgt
tatctgtttttgaatgcgattgccaatcaattgcgttatcccaatagtcacacacactac
ttcagctgtgctgttttacatctttttgctgaagctaatactgaagtaatacaggagcaa
atcacacgtgtattactagaacgacttattgtcaatcgtccacatccgtggggattgtta
attacattcatagaattaatcaagaaccctatatacaaattctgggatcacgacttcgta
cattgtgcacctgagattgcaaaaataatcagatatatttccaatatccagccacttcgt
ccaaattggcgcactgaaaatatcaatgggaaacgtttggcaaataatgcatttacgttg
tggtaa
DBGET
integrated database retrieval system
