KEGG   Teleopsis dalmanni (Malaysian stalk-eyed fly): 119684471
Entry
119684471         CDS       T09311                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
tda  Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tda00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119684471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tda03019]
    119684471
Messenger RNA biogenesis [BR:tda03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     119684471
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd CSTF1_dimer Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_VPS8 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_LRRK2 Beta-prop_HPS5 VPS8_N WDR54 Beta-prop_IFT140_2nd Beta-prop_WDR75_2nd Beta-prop_RSE1_2nd Beta-prop_EDC4L VID27
Other DBs
NCBI-GeneID: 119684471
NCBI-ProteinID: XP_037954444
LinkDB
Position
2:complement(123802782..123804339)
AA seq 422 aa
MDIIDPRNLVKNREILYRLIISQLMYDGLDKFAVELSMLVKADECAPSERLLHVMITGML
AKREKEPIVNDDVVMGIDLEFEPESTTLAPEPASYETAYVTSHKQSCRAGAFSHDGTLVA
TGSVDASIKILDVERMLAKSAPEDLEPGREQQAHPVIRTLYDHTDEVAFLEFHPTEHILA
SGSRDCTVKLFDIAKPSVKKAHKVLTDCEPVTCLSFHPNGDFMVVGTEHQTLRIYDVETS
KCYGGAIPSHQHKAAIRCVKFASKAKLYASGSVDGCIKIWDTVSGRCVNTILDAHGGAEI
CSLQFTRNGKYLLSSGKDSLVYLWELCTSRAIQTYTGAGTTGKQEHNTQAVFNHTEDYVL
FPDEATTSLCSWNARNGARLNLMSLSHNGPVRYITHSPNAPAFLTCSDDYRARFWYRRTP
NQ
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggatattatagatcctagaaatcttgttaaaaatcgcgagatattgtatcgacttatt
ataagtcaactaatgtatgatggtttggacaagttcgctgttgaactttcaatgttggtc
aaagctgatgaatgtgcacctagtgaacgcttgctacacgtaatgataaccggcatgctg
gctaaaagagagaaagaaccaatagtaaatgacgatgtcgttatgggtattgatttagag
tttgaacctgagagtacaacattagcaccagaaccggcttcgtacgaaacagcatatgtg
acttcccacaaacaatcttgtcgcgctggcgctttcagccatgatggtacattagttgct
acgggaagtgtagatgccagcataaagattttagatgtggaacgcatgttggcaaaatct
gcaccagaagatttggagcccggtcgtgaacaacaagctcatccagttatacgtacactc
tacgatcacacggatgaagtggcttttctggaatttcatccaactgaacatatacttgcg
tcggggtcacgagattgtactgttaaattatttgatatcgctaaaccgtctgtgaaaaaa
gcacacaaagttttaactgactgtgagccggtgacttgtctttcttttcatccaaacggc
gacttcatggttgttggtactgaacatcagaccttacgcatatatgatgttgaaacatct
aaatgttatggtggcgctataccatcgcatcagcataaagcagcaattagatgtgttaaa
tttgcttcgaaggcaaagctatacgctagtggtagtgtagatggctgcattaaaatatgg
gatacagtaagtggaaggtgtgtaaatactatactggatgctcatggtggtgcagaaatt
tgttcattacaatttacacgcaacgggaagtacttattatcgtctggtaaggactcttta
gtgtatctgtgggaactttgtactagtcgtgctatacaaacatatactggtgccggcact
actggcaaacaagagcataacacacaggcagtatttaatcatacggaagactatgttttg
ttcccagatgaggctactacatcgctttgttcatggaatgcacggaatggtgcacgtctg
aatcttatgtcattgagccataatggcccagtacgttatataacacattctcctaatgcg
ccagcatttctcacatgttcagatgactatcgtgcacggttttggtatcgacgtacgcca
aatcaatga

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