Triticum dicoccoides (wild emmer wheat): 119274810
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Entry
119274810 CDS
T07278
Name
(RefSeq) tetratricopeptide repeat protein SKI3-like isoform X1
KO
K12600
superkiller protein 3
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119274810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119274810
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
119274810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_1
TPR_16
TPR_8
TPR_11
TPR_12
TPR_19
TPR_CcmH_CycH
TPR_9
TPR_7
ARM_TT21_C
BTAD
T7SS_EccA1_N
TPR_15
TPR_4
Motif
Other DBs
NCBI-GeneID:
119274810
NCBI-ProteinID:
XP_037411430
LinkDB
All DBs
Position
1A:complement(382239151..382249973)
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AA seq
1155 aa
AA seq
DB search
MSAPAARQGAEEEAERLLAAAKLNPNDGGPFRSLGHHYARPGDAQRAARCYQRAVALDPD
DAEAGEALCDLLDAEGKESLELAVCKEAAGKSPRAFWAFRRLGYLQVHQKKWSDAIQSLQ
HSIRGYPTCADLWEALGLAYHRLGMFTAAVKSYGRAIELDSSRVFALIESGNIQLMLGYF
RKGVEQFRSAVEMAPHNHSAYFGLASALLAWSKHCVTTGAFTWAANLLKEASETAKVCTS
LAGNLSCVWKLHADTQLALARCFPWEDRHIKRGMDEQNFKASILQWRNTCLSAANSAKLS
YQRALHLTPWEANIHIDTAICLDLICTMEENNSVDPIAWELPEKMSLGGLMLEPVNKDFW
VTLGSVSSNQALKQHSLIRALQLDTSLSEAWAYLGKIYRQSGHKQLARQAFDRARSIDPS
LALPWAGMSAENDHQSRAGAVNESYESCLRAVQILPLPEFQIGLGTIAARSGELLSPQVL
MAVRQAVQRAPHYPESHNINGLVSEVRSDFQSAITSYQHAKFALGMMRRSKLDNRYPFVD
VSVNLARSLCKAGLATDAVRECEELKTQGLLNVDGLQVYALALWKLGRHDEALSISRNLA
ENLSNMKQESATGALGFICTLAYNIAGKDSAASVIHTLPGQPSYNRELKFIISALDALQP
SKRFQLPHLSMPPRLTSYDVMSEVHSNIALGKAIGGELNNCLGVGGGLSYLKKVLHMYPD
CSLVRNHLGSLLLSSGDWTASHKAVRVTSLSHGHTSNRGLRSPHQIQACATMSCYATCTS
YPKFSFPTCEDQYLSQYNGICNLQRLVHQEPWNQDARYLLVLAIFQKAREEKYPKHICAT
LKRLVLQIMSSSSNSQEHKLILYEKYLLRLLSSEVSLQSDDYENGIAQVTDALRVAPPSV
DTFFAHLQLCRAYVVQGDLSNSRKEYMKCLQNRTNTEVGWVMLKQLESLCSVNRGSDEIE
INLKGCIERNGRNPSKWASLFNLACAQCFMRDEDFASAEKALAQACAEKDADSCILFLNG
AMHMEIARRYAAPQYITRAASSLRKAQQKSQAMVPIISLLLAQAEGSLGSKAKWEKNLRL
EWFSWPPELRPAELYFQMHLLASQSTAAAAAGPQQKKQQQLVETMQSPGAWLLRAIHQNP
SCSRYWTALLQLVCV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccccgcggcgaggcagggcgcggaggaggaggccgagcgcctcctcgcggcc
gccaagctgaaccccaacgacggcgggcccttccgctccctcggccaccactacgcccgc
cccggcgacgcgcagcgcgccgccaggtgctaccagcgggccgtggccctcgaccccgac
gacgccgaggccggggaggcgctctgcgatttgcttgacgcggaggggaaggagagcctg
gagctcgccgtgtgcaaggaggctgccggcaagtcgccgcgcgcattttgggccttccgg
agactcggctacttgcaggttcatcaaaagaagtggtcagatgctatacagagccttcaa
cactcaatacgaggttacccaacatgtgcggatttatgggaggcacttggtctggcttac
caccgtttgggcatgtttactgcagcagtaaagtcatatgggcgagctattgaacttgat
agttccagggtctttgctttgattgaaagtggaaacatccagctaatgcttggttatttc
agaaagggagtcgaacagtttcgttctgccgtggagatggctcctcataatcattctgca
tactttggacttgcttcggcattgcttgcgtggtcaaagcattgcgtaactactggggcc
tttacctgggcagctaatctattgaaggaagcatctgaaactgctaaagtttgcacttcc
ttggctggaaacctttcctgtgtttggaaattgcatgcagatactcagctcgcacttgca
aggtgttttccgtgggaggataggcatatcaagaggggcatggatgaacaaaatttcaaa
gcttctatccttcagtggagaaatacatgcttgtcagctgcaaatagtgcaaaactctca
tatcaacgagctttgcacctcactccctgggaagctaatattcacattgatactgctatt
tgtcttgatctcatttgtaccatggaggagaataactctgtagaccccattgcttgggag
cttccagaaaaaatgtcattgggtggtttgatgctggaaccagttaataaggatttctgg
gttacattgggttcagtctcaagtaatcaggctttaaagcagcattctcttatcagggca
ctgcagttggatacgtctctctctgaagcttgggcataccttggaaagatttacagacaa
tcaggtcacaagcaattggcaagacaagcatttgatcgagctcgaagcattgatccatca
ttggccttgccatgggctggaatgtcggcagaaaacgatcaccaatctagggctggtgca
gtaaatgagtcttatgaaagctgcttgagagctgtgcagatactacctctgccagagttc
cagattggccttggaacaattgcagctcgttctggtgaacttctgtcacctcaggtattg
atggctgtaagacaggctgttcagcgagcgcctcattacccagaatcacacaatataaat
ggcttggtctctgaagtgcgatcagattttcaatctgcaatcacgtcttaccaacatgcg
aaatttgctttaggcatgatgcgcagatccaagttggacaatagatatccttttgttgat
gtttcagtgaatcttgctcggtcactatgtaaggctggtcttgcaactgatgcagtgcgc
gagtgcgaagagttgaaaacacaaggactgctgaacgttgatggattgcaagtatatgct
cttgcattgtggaaacttggacggcatgatgaagctctttccatatcacgaaacttggct
gaaaacttatctaatatgaagcaggagagtgcaactggggcattgggattcatatgcacc
ttagcatacaacatagctgggaaggattctgcagcttcggtcattcatacactccctggt
caacccagttataacagagagttgaaattcatcatctctgcattagatgctttgcagcca
agcaagcgttttcagttacctcacttgagtatgcctcctagacttacatcctatgacgtg
atgagtgaagtccactcaaatattgctctggggaaggcaattggtggggaattaaacaac
tgtttaggggtcgggggtggtttgtcttacctgaaaaaggttctacacatgtatcctgac
tgcagtttagtaagaaaccatcttggatctctgctgctgtcgagcggagattggactgct
tctcacaaagcagtaagggttacttcgttgtcccatgggcacacatccaataggggccta
aggtctccgcatcaaattcaagcttgtgcaacaatgtcttgctatgctacctgcacctct
tatccaaagttctcgttcccaacatgtgaagaccagtacctaagtcaatacaatggaata
tgcaacctgcaaaggttggtccatcaagaaccatggaaccaagatgcacgctacttgctt
gtgcttgctattttccaaaaagcacgtgaagagaagtaccccaaacatatttgtgccact
ttgaagaggctggttttacaaattatgtccagcagtagcaattcacaagagcataaactc
atcctttatgaaaagtacttgctacgtcttttgtcttcagaggttagtttgcaatctgat
gactatgaaaacggcattgctcaagttacagatgctctaagagttgctcccccgagtgtg
gatactttctttgcacacttgcaactatgtcgggcttatgtggtgcaaggcgatctttcg
aactccaggaaggaatacatgaaatgcttgcagaaccgcacgaatactgaggttggctgg
gtaatgctcaagcaacttgaatctttatgttcagtgaaccgtggctctgatgaaatagag
ataaatctgaaaggatgcattgaaaggaatggtaggaacccatcaaaatgggcatctctt
tttaatctagcatgtgctcagtgttttatgcgggatgaggactttgcaagtgctgaaaaa
gctcttgcacaggcatgtgcggaaaaggatgctgatagctgcatcttattcctcaatgga
gctatgcatatggagattgcgcggaggtatgcggctcctcagtatataacccgcgcagct
tcgagcctcagaaaggcacagcagaagtcccaagctatggtgcccatcatatcgctccta
ctggcccaagcagaaggcagcctcggctccaaagccaagtgggagaagaaccttcgcctc
gagtggttctcatggcccccagaactgcggcctgctgagctctacttccaaatgcatctg
ctggcgagccagtcgactgcggcggcggcggcaggtcctcagcagaagaagcagcagcag
ctggtggagacgatgcagagtcctggggcgtggcttctcagggcgatacaccagaacccg
tcgtgctcccggtactggacggctttgctgcagcttgtgtgcgtgtag
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integrated database retrieval system
