Triticum dicoccoides (wild emmer wheat): 119275290
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Entry
119275290 CDS
T07278
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119275290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119275290
03009 Ribosome biogenesis [BR:
tdc03009
]
119275290
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119275290
Spliceosome [BR:
tdc03041
]
Complex A
U1 snRNP components
U1 related factors
119275290
Complex B
119275290
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Helicases
119275290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
SWI2_SNF2
ERCC3_RAD25_C
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
119275290
NCBI-ProteinID:
XP_037412003
LinkDB
All DBs
Position
3B:153694656..153699877
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AA seq
650 aa
AA seq
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MASAAPRYAPPDPTLPKPWRGLIDGTTGYLYFWNPETKAVTYDRPTGPPPPVAPAPAPAP
APAPVQQPQYHHDEMARHRDPPERHTESAGNRVQNAPFADHNARNDPSFEQRFSAGANPA
PVPSTNPAPQADNGNMSVDAYRKKHEITIICPGREAPPPFMSFQSTGFPSEILREVQQAG
FKAPSPIQAQSWPIALKGSDIVAVAKTGSGKTLGYLLPGFILVKNLRHNSRDGPTVLVLS
PTRELATQIQDEAIKFGRSSRISSTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEM
GKVSLRQVAYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPREVRKIASDLL
TNPVQVNIGNSDELVANKSITQLVEVTTSFEKGRRLDQILRQQEPGSKVIIFCSTKRMCD
QLSRNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY
DFPTGVEDYVHRIGRTGRAGATGIAYTFFCDQDSKYASDLVKILERANQNVSPELRAMVG
RGGYGGRGPRRWASSNDSYGGQGAYGSQTRDGPSFQSSFNNSSSGNQYGGAPSFHTSSSN
NQTSSAASLPASGGSGEGLSFHDRFYSGSNRGGDRARSRSPPKAVGVSNW
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcggcgccgcgctacgcgccgccagatccgacgctgcccaagccctggagg
ggcctcatcgacggcaccaccggctacctctacttctggaacccggagaccaaggccgtc
acctacgaccgacccaccggcccccctccccccgtcgcccccgctccggcgccggccccg
gcccccgctcccgtccagcagccccagtaccaccacgacgagatggccaggcacagagac
ccgccggagcgtcacactgaatctgccggaaacagagtgcagaatgcgccctttgctgat
cacaatgcaaggaacgatccttcttttgagcagcgcttttcagctggagcaaaccctgca
cctgtgccttctactaacccagctccacaggctgacaatggaaacatgtcggtagatgca
taccgtaaaaagcatgagattactattatttgcccgggacgtgaagctccaccgccattc
atgtcgtttcagtccacaggcttcccttcggagattctaagggaggtgcagcaagcagga
ttcaaagcaccaagtcctatccaagctcaatcgtggccgattgctctaaaaggtagtgat
attgtagctgtggcgaagacaggttctggaaaaaccctgggttatctacttccagggttt
atacttgttaagaacctacggcacaattcaagggatgggccaactgtgttagttctgtct
ccaaccagggaattggcaacacagattcaagatgaagcaatcaagtttggtagatcatcg
agaatttcatctacttgtctatatggcggtgctccaaaaggccctcagctaagagattta
gagcgtggtgctgacattgttgtcgcaactcctggtagactgaatgatatactagaaatg
ggaaaagttagtctccgtcaggtagcttatctcgttcttgatgaagctgaccgcatgctt
gatatggggtttgagccacaaataagaaaaattgtgaaacaagtgcaaccgaaacggcaa
actcttatgttcactgccacttggccaagagaggtgaggaaaatagcttcagatttgctc
actaaccctgtccaggttaacattgggaactctgatgagctggttgcaaataagtcaatc
acccagcttgtggaagttaccacatctttcgagaaagggaggcgccttgatcagatcttg
agacaacaggagcctggatcgaaggtgatcatattttgctccacgaagaggatgtgtgat
cagctgtctcggaacctatcacggcagtatggtgcttctgctattcatggtgataaatca
caggctgagagggactctgtgttgagtgaatttaggaccggcaggtgcccaattcttgta
gccactgatgtggctgctcgaggcttagacgtgaaggacatcagggttgttgttaactat
gatttcccaacaggtgttgaggactatgtccatagaattgggaggacaggccgggctggt
gcgactggaattgcatacacattcttctgtgaccaggattctaagtatgcttcagatctt
gtgaagattttggagcgtgcgaaccaaaatgtttcgccagagttacgagctatggtcggc
cgtggagggtatggtggcagggggccacggcggtgggcatcttctaatgattcctatggt
ggccagggagcctatggcagccagactagggatggtccaagctttcagtcgagcttcaat
aacagcagcagtggcaatcaatatggtggcgctccaagcttccataccagcagtagcaac
aatcagaccagtagcgctgcaagtttacctgccagtggcggctctggtgaaggtctcagc
tttcatgataggttctatagcggctctaaccgtggtggtgaccgtgctaggagcaggagc
cctcccaaggccgtgggggtctccaactggtaa
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