Triticum dicoccoides (wild emmer wheat): 119276266
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Entry
119276266 CDS
T07278
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119276266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119276266
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119276266
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
DEAD
AAA_19
Motif
Other DBs
NCBI-GeneID:
119276266
NCBI-ProteinID:
XP_037413194
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All DBs
Position
3B:415523140..415526838
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AA seq
766 aa
AA seq
DB search
MADTASPGGTVASRLRSKRRCPDAKLLRQATRRKPYCVDTPSQSSSEAEEDDKDKPPPHP
TRSSSDEGGRGHGRTGIRRPRRRGQNADDDSDEDGRTAARRRRGQNAAHIDEDFEEPGGM
AAARRREKQRMEEDDAAADGGDEADEQGASRRAKKEGAASCRQAAGRKSKDFPAEGWEQL
GDVTFKKSSLVPPRRQDGRDQETYDDLLYSIFEGIETTLQNASAPLDAPVPAQEQGSDPF
PLVFSFGVVDEVVPEKTALDDLWAQRDLALDLEAESNKVFSHTCHKDAESDEHEIPAHGG
TFCKRGKHDLFHDDQIGVRCRKCDYIEIEIRHVFPSMAKESTDREPAAEHDRLDMFVDDI
LKSVGYEGASNVGLGSDKTGVVWDLIPGVREDMFPHQREGFEFMWRKLAGGIDIEQLRHT
MNTDTTSGCVISHAPGTGKTRLAITFVQSYLEVFPHCRPVIIAPRGMLATWEQEFSKWNV
KLPFHVLSSSEIQWDQDKTIQKLVSKDHGLGQKLAMKKLSQKSKMMLKLASWYEGSSIIG
LSYSLYRNLAKGEGKDGEMQRNLLLEKPGLLVLDEGHTPRNKKSLIWKVLAEVSTEKRII
LSGTPFQNNFLELYNILCLVKPKFAKDFACTRLSKKGVASTSQSRAAPYVEEDEGKEFWS
SLRISNITDEHITEIREKLGPFVHIHNGDILQKSLPGLRESVVILNPLPRQKEIIAMMEE
SAGKGFLDAEYKISLASIHPFLVTSTKLSDTEASVVDKMKSVRLNP
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccgcctctcccggcggcactgtcgcgtcgcggctgcggtcaaagcggaga
tgccccgacgcgaagctgctccggcaagccacccgcagaaagccgtactgcgtcgacacg
ccctcgcagtccagctcggaggcagaggaggacgacaaagacaaaccaccgcctcatcca
acgcggtcgtccagtgacgagggcgggcgcgggcatggcaggacggggataaggcgccca
cggcgccgaggacaaaacgccgatgatgactctgatgaagacggcagaacggcggcgagg
cggcgccgaggacaaaacgctgcccacatcgatgaagactttgaggaacccggtggaatg
gccgccgcaaggagaagggagaagcagcgcatggaagaagatgatgctgctgctgacggc
ggcgatgaggctgatgagcagggagcttcccggagggcaaagaaagaaggagcggcgtcc
tgccggcaggcggccggccgcaagagcaaggacttccccgcagagggatgggagcagctg
ggtgatgtcaccttcaagaagagctccctggttcctccgaggcggcaggacgggcgagac
caagagacttacgacgatctgctctactccattttcgagggaatcgagaccactcttcag
aacgcctctgctcctctggacgcccctgttcctgctcaagaacagggaagcgatccgttt
cctctggtgttctccttcggggttgtagatgaggtggtgccggagaagactgctctggac
gacctgtgggcacaacgtgacttggccttggacttggaggccgaatccaacaaggttttt
tctcacacctgccacaaggacgcagagagcgatgagcatgaaattcctgcacatggaggg
actttttgcaagcgagggaagcatgatctctttcatgatgatcaaatcggcgttcgatgt
cgaaaatgcgattacatcgaaatcgaaattagacacgtatttccatccatggccaaggaa
tcaacggatagggagccagcagcggagcatgataggcttgacatgttcgttgatgacatc
ctgaaatcagttggatacgaaggggcaagcaacgtgggactgggaagtgacaaaactggc
gtcgtctgggatctcattcctggggtacgggaagacatgttcccacaccagcgggaaggg
tttgagttcatgtggagaaaacttgcaggagggatcgacattgagcagctgaggcacacc
atgaacactgacaccacaagtggctgtgtgatctctcatgccccggggaccggcaagacc
aggctagcaatcacattcgtgcagtcttacctggaggtcttcccgcactgcaggccagtt
atcattgcccccaggggtatgctggctacatgggagcaggagttcagtaaatggaatgtc
aagctcccattccatgtcctcagttccagtgagatccagtgggatcaagacaagaccatc
cagaaactggtctccaaggatcatggtctgggccagaagctggccatgaagaaactgagc
cagaaatccaagatgatgctgaagctggcatcatggtatgaagggagcagcatcatcggt
ctaagctattcgctctacaggaatcttgccaaaggcgaaggcaaggatggagaaatgcag
aggaacctgcttcttgagaagcccggcttgctggtcctcgacgaggggcacacaccaagg
aacaagaagagcctcatttggaaagttctcgcagaggtcagcaccgaaaagcggataatc
ctgtcagggactccattccagaacaacttcctagagctatacaacatcttgtgcttggtt
aagcccaagtttgccaaagattttgcttgtacaagactcagcaagaaaggagttgcttcc
accagccaatcaagagcagcgccttatgtggaggaggatgaaggcaaagaattctggagt
tcattaaggataagtaacatcacggatgaacacatcactgaaatccgggaaaagctgggc
ccttttgtgcacatccataatggtgacattcttcagaagtctcttccaggattgagagaa
tctgttgtgatcctgaaccctcttcctcgtcagaaggaaatcatcgcaatgatggaggaa
agtgcagggaagggttttcttgacgcagaatacaagatatctcttgcgtccatacaccca
ttcctcgtcacaagcacaaaactgtcagacacagaagcctctgttgtggacaagatgaag
agcgtgcggctgaacccatga
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