KEGG   Triticum dicoccoides (wild emmer wheat): 119276748
Entry
119276748         CDS       T07278                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119276748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119276748
Spliceosome [BR:tdc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119276748
 Complex B
    119276748
 Complex C
   U2 SnRNP specific factors
    119276748
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 119276748
NCBI-ProteinID: XP_037413790
LinkDB
Position
3B:complement(500578628..500586453)
AA seq 492 aa
MASSVLEATRAAHEDLERLERLAVRELQRDPANARDRLFQSHRVRHMLDLVVSTSDKLVE
IYEDKDGARKDEISTHLTAPVQSDIFPKYYERLKEIRDYHRRNHSARFVSETDDYEELLK
EEPAIEFTGEEAFGRYLDLHELYNEFINSKFGSLMEYSAYVGTFAQTEKIAHNLKATRPY
KEYLEHILEYLMSFLYRTEPLQDIEKIFTKLESEFEEQWTNGEVPGWENKGTEKESVLQE
SAVDLDYYSTVEELVELGPEKLKEALTARGLKGGGTVQQRAERLFLLKHTPLEKLDRKHF
AKGDDLKKEIALIEMKMKRLCEILDEVIVRTKENAEKKLTLTYEEMEAEREEEEVQADSE
SDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWGRRAYERHFKEW
RHQHGMRCLGIPNTKNFNEITSIKEATALWERIQAKQGQNKWRPDLEEEYEDKDGNIYNK
KTYTDLQRQGLI
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggcgtcgtctgtgctggaggccacgcgggcggcgcacgaggacctcgagcggttagag
cgcctggcggtgcgcgagctgcagcgcgaccccgccaacgcgcgcgaccgcctcttccag
tcccaccgcgtccgccatatgctcgacctcgtcgtctccacgtccgacaagctggtggaa
atctatgaagacaaggacggtgctaggaaggatgagatctccacccatcttaccgcgccg
gtgcaaagtgacatcttccccaagtactatgaaaggctgaaagagattcgtgattaccat
agacggaatcactctgcccgtttcgtcagtgaaactgatgattatgaggagctactaaag
gaggaaccagctattgaattcactggcgaggaagcatttggccggtacttggacctacat
gagctctacaacgagttcataaattccaagtttggatcactaatggaatactcggcatac
gttggcacttttgctcagactgaaaaaatcgcacataatctaaaagctaccaggccatac
aaagaatatttggagcatattttggaatatctgatgtcatttctgtatcgtacagaaccg
ttgcaagatattgagaagatttttacaaagttggaaagtgagtttgaagaacagtggacc
aatggcgaagttcctggatgggagaataagggcacagagaaagaatctgtgttgcaagag
tctgcagtagaccttgattactatagtactgttgaagagcttgtagagcttggtccggaa
aagttgaaggaggctttaactgctcgtggattgaagggtggcggcactgttcaacagcgt
gctgagcgacttttcttgctgaagcatacacccttggaaaaactggatcgcaagcatttt
gccaaaggtgatgatttgaagaaggaaattgctttgattgaaatgaagatgaagcgctta
tgtgagattctcgatgaggtcattgtaagaacaaaggaaaacgcggagaagaagctgacc
ttgacctatgaagaaatggaagcagagcgggaagaggaagaagtgcaagctgatagtgaa
agtgatgatgaagaccaacaaatctacaaccccctcaagttaccaatgggctgggacggg
aaacctatcccttattggctctataagcttcacggtcttggtcaggaattcaagtgtgaa
atatgtggtaaccacagttactgggggcgaagggcttatgagcgccatttcaaggagtgg
cgccatcagcatgggatgcgatgccttggcattcctaatactaagaacttcaatgaaatt
acatccatcaaggaggcgacggcactctgggagagaatacaagcaaagcaagggcagaac
aagtggcggccagacttggaagaagagtatgaagataaggatggaaacatctacaacaaa
aagacctatactgatctgcagcgccaaggcctgatatag

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