Triticum dicoccoides (wild emmer wheat): 119279734
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Entry
119279734 CDS
T07278
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119279734
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119279734
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119279734
NCBI-ProteinID:
XP_037416775
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Position
3B:630685762..630687422
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AA seq
397 aa
AA seq
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MAPPQSDEQLVDDPAMVDITPPHPDEHFSDEPAVEDTAPPRFSDEQQPGSVPQTTLMPYA
AVDSSLRAMAGQAEGFGRHAIGGLHGDVYHVTTLNDDGPGSLRDGCRRQEPLWIVFDVSG
TIRLASGLRVSSQKTVDGRGRRVTLSGKGLLLRECEHVILCNLEVEGGRGHDADAVQIKP
GSRHVWVDRCSLRDFADGLLDVTCGSTDVTVSRCRFSAHDKAVLIGASSEHVVDRRIRVT
IHHCLFDGTRQRQPRVRFGRVHLYNNYTRGWGIYAVCASVESQIVSQCNIYEAGEKKKVF
TYMSEQAADRDCSSSGRIRSEGDLFLNGAKEHTENDLETAEDGQWDFKVRDCYRPWSVQP
ASMALKELLESCTGWQPVPLPEDDVCFTRTPAAAEPL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcctcagtccgacgagcagctcgtcgacgatcctgccatggtggacattact
cctcctcaccccgacgagcatttcagtgatgagccggccgtggaagacacagcccctcct
cgattctccgacgagcaacaacccggcagcgtgccgcaaaccacgctgatgccgtacgca
gccgtggactcgtcgctgcgcgccatggccggccaggccgagggcttcggccggcacgcc
atcggcggcctccacggcgacgtctaccacgtcaccaccctcaatgacgacgggcccggg
tcgctgcgcgacggttgccgtcgccaggagccgctgtggatcgtcttcgacgtgtccggc
accatccgcctcgcgtcggggctgcgcgtgtcctcccagaagaccgtggacggccgcggg
cggcgcgtgacgctgtccggcaagggccttcttcttcgcgagtgcgagcacgtgatcctg
tgcaacctggaggtggagggcgggcgcgggcacgacgccgacgccgtccagatcaagccc
gggtcgaggcacgtgtgggtggaccgctgcagcttgcgcgacttcgccgacggcctgctg
gacgtgacctgcggcagcacggacgtgacggtctcccggtgccgcttctcggcgcacgac
aaggccgtgctgatcggcgccagcagcgagcacgtcgtggaccggcgcatccgggtgacc
atccaccactgcctcttcgacggcacgcggcagcggcagccccgcgtccggttcggccgg
gtgcacctctacaacaactacaccaggggctggggcatctacgccgtctgcgccagcgtg
gagtcgcagattgtctcccagtgcaacatctacgaggcaggggagaagaagaaagtgttc
acgtacatgagcgagcaggcggcggacagggactgcagttcaagtgggcgcatccggtct
gaaggcgacctgttcctgaacggcgcgaaggagcacaccgaaaatgatttggaaactgca
gaagacggccagtgggacttcaaggtccgggattgctacaggccgtggtcggtccagccg
gcgtcgatggcgctcaaggagctcctggagtcctgcaccggctggcagccggttccgttg
ccggaagacgacgtctgcttcacaagaacgccagctgctgctgaaccactctga
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