Triticum dicoccoides (wild emmer wheat): 119291462
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Entry
119291462 CDS
T07278
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119291462
03015 mRNA surveillance pathway
119291462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119291462
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119291462
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119291462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
119291462
NCBI-ProteinID:
XP_037426114
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All DBs
Position
4B:563155055..563159188
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AA seq
506 aa
AA seq
DB search
MADAGAAKPEPEKKSWADVEEEEEAKAKAEAEAELAAAASSSSSAAPIEPVVEAQAKQIE
ALSLSVPDDDGGAEGPPLLDDSDDSQIQAVTSGGTVYESATTFEDVKLTPELLKGLHDEM
GFSRPSKIQAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPNRKVPQAICICP
TRELAQQNKSVLMRMGKFTGITCACAIPSSQKEYMPISKMAPVTDQVVIGTSGTLTKWIT
HKKLATREIKILVFDEADHMLAEEGFKTDSLRIMKDIQNSAGGCQVLLFSATFNEKVKEF
VTRVIKDGNQIFVKKEDLTLEKVKQYKVRVPDEAAKIEVIRDKIFEFGQKVGQVIIFVRT
RNSTKNVHNALTKEDYVCSSIQGSLDQAEREKVIQEFKDGYTKVLISTDVLARGFDQAQV
NLVINYDMPIKYNTRDEPDYEVYLHRIGRAGRFGRKGAVFNLLCGQTDEAVMTKIEDYFQ
HKVPEVPNWKSEDNFETALKDAGLLE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccggcgccgccaagcccgagccggagaagaagtcctgggccgacgtcgag
gaggaggaggaggccaaggccaaggcggaggcggaggccgagctcgccgccgccgcctca
tcctcctcctccgccgcccccatcgagccggtggttgaggctcaggcgaagcagatcgag
gcgctctcgctctccgtgccggacgacgacggcggcgccgagggcccgcccctgctcgac
gactccgacgactcccaaatccaagccgtgacctcgggcggcacggtgtacgagtcggcg
acgaccttcgaggacgtgaagctcacccccgagctgctcaaggggctgcacgacgagatg
gggttcagccgccccagcaagatccaggccatcacactccccatgatcctcacgccgccc
tacaaggacctcgtcgcgcaggcgcacaacggctccggcaagaccacctgcttcgtcctc
ggcatgctcagccgcgtcgaccccaaccgcaaggtcccccaggccatctgcatctgcccc
accagggagctcgcgcagcagaataaatctgtgctcatgaggatgggcaagtttaccggc
attacctgtgcctgtgcaatcccgtcgtctcagaaagaatatatgcccatcagcaaaatg
gctccggtgaccgatcaggtggtgattggcacttctgggacgctcaccaagtggattacc
cataagaagcttgcgactagggagatcaagattcttgtgttcgacgaggcagatcatatg
cttgccgaggagggctttaaaactgattctttaaggatcatgaaggatatacaaaatagt
gctggtggctgtcaggtgcttctcttctctgcgaccttcaacgagaaagtgaaggaattt
gttacaagggtcattaaggacggaaaccaaatatttgtgaagaaggaagatcttactttg
gaaaaagtaaagcaatataaagtccgagtccctgatgaggcggccaaaatagaggttata
agggacaagatctttgagtttgggcaaaaggttggacaggttatcatctttgtgagaaca
agaaatagtactaagaatgtacataatgctttgacaaaagaggactatgtgtgctcctca
attcaaggatcccttgaccaagcagagagggaaaaagtaattcaggaattcaaagatggg
tacaccaaggttcttatatcaactgatgttcttgctcgtgggtttgaccaagcacaggtt
aacctggtcatcaactacgacatgccaatcaagtataatacgagagatgaacctgattat
gaggtgtacctgcacagaattggcagagctgggcgctttggccgaaaaggagctgtgttc
aacctgctatgtggtcaaactgatgaagctgtgatgacaaagatcgaggactacttccag
cacaaagtgcctgaggtccccaactggaaaagcgaggacaattttgagactgctcttaag
gatgcgggtttactcgagtaa
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