Triticum dicoccoides (wild emmer wheat): 119315747
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Entry
119315747 CDS
T07278
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119315747
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119315747
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119315747
NCBI-ProteinID:
XP_037446143
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Position
6A:complement(121138915..121140133)
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AA seq
378 aa
AA seq
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MAILLFLFFTSILSISYSSPLPVNASGNISARRQAGCGTGNPVDDCWRCDPCWADNRQRL
ADCAIGFGRNAIGGKGGRTYVVTDPGDEDPANPAPGTLRYGLVQDEPLWIIFACNMTIRP
KRELVVSSHKTVDGRGASVVVGEGGACFTVRNRSNVIIHGITIRGCRPAPKSSARTGHLS
DGDGVSIFGARDVWVDRCTLEDCADGLVDVIAASTGVTVSNCLLTNHNKAMLLGHNDGYE
DDRAMRVTVAFNRFGPGLVQRMPRCRFGVFHVVNNDYVNWGKYAIGGSASPTILSRGNRF
CAGKKKEVTKRDGDPPKSEWQKWNWISDGDLMFNGAFFTASGGPGAEVKAPSFAKPASFV
APMTASAGALSCSKGSLC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggccattctcctcttcttatttttcacatccattttatccatttcctactcttcgcca
ttgccggtcaatgcctccggtaacatatcagcgcgccggcaagccggttgcggcaccggc
aacccggtcgacgactgctggcggtgcgacccttgctgggccgacaaccggcagcgactc
gccgactgcgccatcgggttcggccgcaacgccatcggcggcaagggcggcaggacatac
gtggtgacggaccccggcgacgaggacccggccaaccccgcccccggcacgctccgctac
ggcctcgtccaggacgagcccctctggatcatcttcgcctgcaacatgacgatccgtccc
aagcgggagctcgtcgtgagctcccacaagacggtggacggccgcggcgccagcgtcgtc
gtcggcgagggcggcgcgtgcttcacggtgcgcaaccggagcaacgtgatcatccacggc
atcaccatccgcggctgcaggccggcgcccaagtcgtcggcgaggacgggccacctgtcg
gacggcgacggcgtcagcatattcggcgcgagggacgtgtgggtggaccgctgtacgctg
gaggactgcgccgacggcctcgtggacgtgatcgcggcatccaccggcgtgaccgtctcc
aactgcctgctgaccaaccacaacaaggccatgctcctcggccacaacgacggctacgag
gacgacagggccatgcgcgtcaccgtcgccttcaatcgcttcgggccgggcctcgtgcag
aggatgccgaggtgccggtttggggtgttccacgtcgtcaacaacgactacgtaaactgg
gggaaatacgccatcggcggcagcgcgtcgccgaccatacttagccgaggcaacaggttc
tgtgccggcaagaagaaagaggtgacgaagcgcgacggcgacccgcccaagagcgagtgg
cagaagtggaactggatatccgacggcgacctgatgttcaacggcgcgttcttcacggcg
tccggcggaccgggggctgaggttaaagcccccagttttgccaagcccgcctctttcgtg
gcgccgatgacggcctccgcaggcgctctctcgtgcagcaagggttctctatgctga
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