Triticum dicoccoides (wild emmer wheat): 119319406
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Entry
119319406 CDS
T07278
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119319406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119319406
Spliceosome [BR:
tdc03041
]
Complex A
U1 snRNP components
U1 related factors
119319406
Complex B
119319406
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
119319406
NCBI-ProteinID:
XP_037449787
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All DBs
Position
6A:complement(15509022..15524530)
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AA seq
987 aa
AA seq
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MASNMQTPGPPQPPRPPMMGSTAPQNMGQPMPMQWPPGPPQQPPQFMQPAPQQYRPVGQA
MPGVNMGMPGQMQHFQQPGPHMPHSGHVPPASQAVPMPYQAARPMSSAPMQPQQQGVFPG
GLMPTMGTPMPPPSYTYQPTSVPPGSQPWGTVLGQGAPLVSPMVQPGHQPLSASVPPVSS
TEPSSADWQEHSSGDGKKYYYNKRTKQSSWEKPAELMTPLERADASTEWKEFTTAEGRKY
YYNKVTKQSKWSIPDELRIARELAEKTSIQQPARETESTTVAPVGSTSVSVEPSLPAKQS
SSLVGTIAPSSHDAIANLPPPGAGPSYNGDISSSSSMQNGGTSAAVVAPVTTSTGDPSVA
SDAGTNRSTYGSSSVPSTTDTKVGASAEDLEEAKKTMPTAGKINVTPLEDKTSEEEPVVY
ATKLEAKNAFKSLLESANVQSDWSWDQAMRVIISDKRYGALKTLGERKQAFNEYLNQRKK
IEVEERRVKQRKARDDFLTMLEECKDLTSSLRWSKAITMFGHDERFNAVERPKEREDLFE
NYLVELQKKEKAKAAEEHKRRIAEYREFLESCDFIKANTQWRKVQDRLEDDERYARLEKI
DRLDVFQDYIRHLEKEEEEQKRIRKEQLRRQERKNRDEFRKMMEEHVADGTLNAKTYWRD
YCSQIKDSRAYLAVASNLSGSMPKELFDDVMEELDKQYQDDRALIKDEVKSGKIPMLASW
TLEDFQAAVTEDEKYKGVSNINIKLIYEDQIERLKEKDLKEAKKRQRLGDNFLDLLYSIK
EITAASTWDDSKSLFDDTQEYRDLGGETYAKELFEEYIARLKERLKEKERMREEEKAKKE
KDREERDKKKEKEKEKKEKDRKEKERDREKEREKEKGKDRSRRDEMDIDDDVEIHASKDK
KREKDKEKKHKRRHHDTTDSERDEKDDSRKSRRHSSDRKKSRKHTHASDSDSENRHRRHK
KDRDSSRKNGGHEELEDGELGEDGEIH
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaatatgcagactcctggtccgcctcagcccccccggcctcctatgatgggt
tctaccgcaccacaaaatatgggacaaccaatgcccatgcagtggccacctggtccgcca
caacagcctcctcagttcatgcaaccagctccacaacaatatcggcctgttggtcaggcc
atgccaggagttaacatgggcatgccagggcagatgcaacattttcagcaacctgggcca
catatgcctcactctggtcatgttccgcctgcatcgcaagctgttcctatgccgtaccag
gcagctagacctatgtcatcagctcctatgcagccacagcagcaaggtgtattccctggt
ggacttatgcccaccatgggcacccctatgccgcctccttcttatacctatcaaccaaca
tcggttcctcctggatctcaaccctggggcacagtcctgggtcagggcgcacctcttgtg
tcgccgatggtgcagcctgggcatcagcctctctcagcttcagtgcccccagtgagctca
actgaacctagctctgcggattggcaagagcacagttcaggggatggaaagaagtactat
tacaataagaggacaaagcaatcaagttgggagaaacctgctgagctgatgacccctttg
gagcgggctgacgcttcaactgaatggaaagaatttactacagcagaagggcggaagtac
tattacaacaaagtgacaaagcaatccaaatggtctattcctgacgagctaaggattgca
cgtgaattagcagaaaagacatcaattcagcagcctgcccgggagactgaatccactact
gttgcccctgttggatccacttctgtttctgtagagccttccttacctgccaaacagtct
tcatcgttagtaggaacaattgctccaagctcccatgatgcgatagcaaacttgcctcct
cctggtgctggcccgtcgtacaatggggatatatcttcttctagttccatgcaaaacggt
ggaacaagtgctgctgtggttgcccctgttacaacgagcactggagatccatcagttgca
agtgatgcagggacaaacagaagcacttatggaagttcatctgtacctagtactactgac
acaaaagttggagcatctgctgaagatttggaggaggccaaaaagacgatgccaactgca
gggaagatcaatgttactccgctggaggataaaacaagtgaagaagaacctgttgtttat
gctactaagttggaagcaaagaatgcattcaagtccctgcttgaatcggcaaatgttcag
tcagattggtcatgggatcaggctatgagagttattataagtgacaaaagatatggtgcc
ctgaaaactcttggagagagaaagcaagctttcaatgagtacttaaaccagcggaaaaag
attgaagttgaggagaggcgtgtcaagcaaaggaaagcacgtgatgattttctcactatg
ctggaagaatgtaaggaccttacatcatcactgagatggagcaaagcaatcactatgttt
gggcatgatgaaaggttcaatgctgttgaacgccccaaggagcgtgaagatttatttgag
aactatcttgtggaactacaaaagaaggaaaaagcaaaggctgctgaagagcacaaaaga
cgcatagcagaatatagagaatttcttgagtcatgtgatttcatcaaggcaaacacccag
tggcgaaaagttcaagatcggctagaggatgatgaacgctatgctcgacttgagaagatt
gaccgcttggatgtttttcaagactatataaggcatcttgaaaaagaagaggaagaacag
aagagaattcggaaggagcaattaaggagacaagaacggaaaaaccgcgatgagtttcgg
aagatgatggaagaacatgttgctgatggcacacttaacgcaaaaacttactggcgtgac
tactgttcacagataaaagattcacgtgcttacctggcagttgcttcaaacttgtctggc
tcgatgccaaaagaactctttgatgatgtcatggaggagcttgataagcagtatcaagat
gatagggctttaattaaagatgaagtgaaatctggaaagattcctatgttggcctcatgg
acattagaggacttccaagctgctgttactgaggacgaaaaatataaaggagtgtcgaac
ataaatatcaagcttatttatgaggaccaaattgaaaggctcaaggaaaaggatctaaag
gaggccaagaagcgtcagcgactgggtgataattttctggatctactgtattcaatcaag
gaaattactgctgcttcaacatgggatgattctaaatcactatttgatgatacccaggaa
tacagggatcttggtggcgagacatatgctaaagagctttttgaagagtatattgcccgc
ctcaaagaaaggcttaaagagaaagagcgcatgagggaagaagagaaggcgaagaaagag
aaagaccgtgaagagagagacaagaagaaagagaaggaaaaggaaaagaaggagaaagat
cgcaaagaaaaagaaagagaccgagagaaggaaagagaaaaggaaaaaggaaaagaccgg
tcaaggagagatgaaatggatattgatgatgatgtggaaattcatgcctcgaaagataag
aaacgagagaaggataaagaaaagaagcataaaaggcgccaccatgacaccacagattct
gaaagggatgagaaggatgactcaaggaaatctcgaaggcatagcagtgatcgcaagaaa
tctaggaagcacacccatgcttcagactcagatagtgaaaaccggcatagaagacacaaa
aaggatcgagatagttcccgcaaaaatggtgggcatgaggagcttgaagacggtgaactt
ggagaagatggggagatccattag
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