Triticum dicoccoides (wild emmer wheat): 119325746
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Entry
119325746 CDS
T07278
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119325746
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119325746
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119325746
NCBI-ProteinID:
XP_037455369
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Position
6B:complement(195069887..195072394)
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AA seq
380 aa
AA seq
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MAILLFFIFTSILSISYSSPLPVNASGNISVRRQRTPEQCGTGNQVDDCWRCDPGWADNR
QRLADCVIGFGRNAIGGKGGRTYVVTDPGDEDPANPAPGTLRYGLVQDEPLWIIFACSMT
IRPQREFVVSSHKTVDGRGASVVVGEGGACFTVRNQSNVIIHGITIRGCRPAPKSAKTGH
LSDGDGVSIFGARDVWVDHCTLEDCADGLVDVIAASTGVTVSNCLLTNHNKAMLLGHNDA
YEDDRAMRVTVAFNRFGPGLVQRMPRCRFGVFHVVNNDYVNWGKYAIGGSASPTILSRGN
RFCAGKEKEVTKRDGDPPKSEWQKWNWISDGDLMFNGAFFTASGRPGAEVKAPSFAKSAS
FVAPMTASAGALSCSKGSLC
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggccattctcctcttctttattttcacatccattttatccatttcctactcttcgcca
ttgccggtcaatgcctccggtaacatatcagtgcgccgacaacgaacgcctgagcaatgc
ggcacaggcaaccaggtcgacgactgctggcgatgcgaccccggctgggccgataaccgg
cagcggctcgccgactgcgtcatcgggttcggccgcaacgccatcggcggcaagggcggc
aggacatacgtcgtgacggaccccggcgacgaggacccggccaaccccgcccccggcacg
ctccgctacggcctcgtccaggacgagcccctctggatcatcttcgcctgcagcatgacg
atccgtccccagcgggagttcgtcgtgagctcgcacaagacggtggacggccgcggcgcc
agcgtcgtcgtcggcgagggcggcgcgtgcttcacggtgcgcaaccagagcaacgtgatc
atccacggcatcaccatccgcggctgcaggccggcgcccaagtcggccaagacgggccac
ctgtcggacggcgacggcgtcagcatattcggcgcgagggacgtgtgggtggaccactgc
acgctggaggactgcgccgacggcctcgtcgacgtgatcgccgcctccaccggcgtgacc
gtctccaactgcctcctgacaaaccacaacaaggccatgctcctcggtcacaacgacgcc
tacgaggacgacagggccatgcgggtcaccgtcgccttcaatcgcttcgggccgggcctc
gtgcagaggatgccgaggtgccggttcggggtgttccacgtcgtcaacaacgactacgta
aactgggggaaatacgccatcggtggcagtgcgtcgccgaccatacttagccgaggcaac
aggttctgtgctggcaaggaaaaagaggtgacgaagcgcgacggcgacccgccgaagagc
gagtggcagaagtggaactggatatccgacggcgacctgatgttcaacggcgcgttcttc
acggcgtccggcagaccgggggctgaggttaaagcccccagttttgccaagtccgcctct
ttcgtggcgccgatgacggcctccgcaggcgctctctcgtgcagcaagggttctctgtgc
tga
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