Triticum dicoccoides (wild emmer wheat): 119344814
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Entry
119344814 CDS
T07278
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119344814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119344814
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
119344814
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Motif
Pfam:
LRR_6
LRR_4
F-box-like
Colipase-like
Motif
Other DBs
NCBI-GeneID:
119344814
NCBI-ProteinID:
XP_037471047
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Position
1B:502670341..502674552
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AA seq
379 aa
AA seq
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MVSARSVDRQLDTCFSNLMVSSGGGRGQAETGGAMPMLSGWKDLPMELLMRIISVAGDDR
IVVVASGVCTGWRDALGWGVTNLSLSWCQQNMNNLTISFAHKFTKLQVLTLRQIKPQLED
SAVEAVANYCYDLRELDLSRSFRLSDRSLYALANGCPRLTKLNISGCSSFSDSALIYLSC
HCKNLKSLNLCGCGKAATDESLQAIAQNCGHLQSLNLGWCDNVTDEGVTSLASGCPDLRA
LDLCGCVLITDESVIALASGCPYLRSLGLYYCQNITDRAMYSLANSCVKSKRGRWGTPRS
SSSNSKDIDGLANLNISQCTALTPPAVQAVCDSFPSLHTCPERHSLIISGCLSLTNVHCA
CGLQRHRAGSALQATSHAY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggttagtgcgaggtcagtggacaggcagttggatacatgcttcagcaacctcatggtg
tctagcggcggtggaagggggcaggctgaaactggtggcgctatgcctatgttgtcagga
tggaaggacctgccaatggagctgcttatgcggatcatatcagttgctggagatgatcga
attgtcgttgtcgcatccggtgtttgcactggctggcgcgacgcgttaggatggggggtt
actaatctttccctttcatggtgccagcagaacatgaataacttaacgatatcatttgct
cacaagttcacaaagcttcaggttctcactcttcgccaaatcaaacctcagctcgaagac
agtgcagtagaggctgttgccaactactgttatgatctacgtgagttagacctcagccga
agttttcggcttagtgaccgatcattgtatgcattggccaatggatgtcctcggcttaca
aaactgaacatcagtgggtgttccagtttcagtgacagtgccttaatctaccttagttgc
cactgtaaaaacctgaagagcttgaatctttgtggatgtggaaaggcagccactgatgaa
tccttgcaggccatagcccaaaactgtgggcacctgcaatctttaaacctaggttggtgt
gacaatgtcacagatgagggggttaccagcttggcatcaggctgccctgatctcagggcc
ctggatttgtgtggctgtgttcttataacagacgaaagtgttattgctctagcaagcggg
tgcccgtacctgcgatctttgggcctgtactactgccagaacatcaccgaccgtgccatg
tactccctcgcaaacagctgcgtgaagagcaaacgagggaggtggggcaccccgcggagc
agcagcagcaactcgaaggacatcgacgggctggctaacctgaacatcagccagtgcacg
gccctgacgcctcccgcggttcaggcggtgtgcgactccttcccgtcgctccacacctgc
ccggagaggcactccctcatcatcagcggctgcctcagcctgactaacgtccactgtgcc
tgcggcctccagcgccaccgcgccggaagcgccctgcaggccaccagccatgcgtactga
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