Triticum dicoccoides (wild emmer wheat): 119344989
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Entry
119344989 CDS
T07278
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119344989
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119344989
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119344989
NCBI-ProteinID:
XP_037471144
LinkDB
All DBs
Position
Unknown
AA seq
243 aa
AA seq
DB search
TIFALPTVDNRAWIMFHHADGLAIRGGTLDGQGQEYWACKKAGRCTAGQGPRTLDISQSK
GVSVKQLTLLDSKEFHVTIFDCSGVTVQGVRIIAPADSRNTDGIHASHSRHVRILNTTIG
TGDDCISLGPGTSDMLIRDIKCGPGHGISIGSLGWQDGEEGVRNVTVDRAVLKGTTNGLR
IKTWAMPNSGSVTNVSFSRVTMNRVANPILVDQNYCPRKGDCPGNSSGVQISDLSYTDIK
GSS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
accatcttcgcactgccgacagtggacaacagggcgtggatcatgtttcaccatgccgat
ggcctggcgattcgtggtgggacgctggacgggcaggggcaggagtattgggcgtgcaag
aaggccggcaggtgcaccgccgggcagggccccaggacgcttgacattagccaatccaaa
ggcgtgagcgtgaagcagctgacactgcttgacagcaaggaattccacgtgaccatcttc
gactgtagcggcgtgacggtccaaggcgtccggatcatcgcgccggccgacagccgcaac
accgacggcatccacgccagccactcccgccacgtgaggatcctcaacaccaccatcggc
accggcgacgactgcatctccttggggcccggcacctccgacatgctcatcagggacatc
aagtgcggtccgggccacggcatcagcatcgggagcctgggatggcaggacggtgaggag
ggggtgagaaacgtgacggtggacagggcggtgctgaagggcacgaccaacggcctgcgg
atcaagacgtgggcgatgcccaactccggctccgtcacaaacgtctccttctcacgggtc
acaatgaaccgcgtggccaaccccatcctcgtcgaccagaactactgcccccgcaagggc
gactgcccgggcaatagctcgggggtgcagatcagcgacctgtcgtacacggacatcaag
ggctcgtcg
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integrated database retrieval system