Triticum dicoccoides (wild emmer wheat): 119353092
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Entry
119353092 CDS
T07278
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119353092
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119353092
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119353092
NCBI-ProteinID:
XP_037475568
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Position
2A:complement(43898291..43900204)
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AA seq
389 aa
AA seq
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MGARASCFSRLYCCWISFPSPDHRPPRPPPTPAAAGAAYLPCPGMDAEAGPGAVTTAAHR
PPQPRTPYADADRTLRALAAAAEGFGRRAIGGLHGALYHVTSLQDDGHGTLREACRAKEP
LWVVFEVSGDIHLHTYLRVSSHKTIDGRGQRVRLTGKGLQLKDCHHVIVCNLQFEAGRGH
DVDGIQIKPGSTNIWIDRCSLADYDDGLIDITRQSTDITVSRCHFARHDKTMLIGADPKH
VDDRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRDWGIYAVCAGVEAQIVSQCNIY
EGGHKKTVFKYMPEKAADREETAAGWIRSEGDAFLHGALPCLVDGPGAECVFRPEEYYDR
WTMEAASPALKEVIQLCAGWQPVPRPPDC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcccgtgcctcctgtttctcccgcctctactgctgctggatctccttcccctcc
cccgaccaccgtcccccgcgtcctcctccgactccagccgccgccggcgcagcctacctc
ccctgccccggcatggacgccgaggcggggccgggggcggtgacgacggcggcccaccgc
cccccgcagccgcggacgccctacgccgacgcggaccgcaccctccgcgcgctcgccgcc
gccgccgagggcttcggccgccgcgccatcgggggcctccacggcgccctctaccacgtc
acctccctccaagacgacgggcacgggacgctgcgggaggcgtgccgggccaaggagccg
ctgtgggtcgtcttcgaggtctccggcgacatccacctccacacctacctgcgggtctcc
tcccacaagaccatcgacgggcgcgggcagcgggtccggctcaccggcaaggggctccag
ctcaaggactgccaccacgtcatcgtctgcaacctccagttcgaggccggccggggccac
gacgtcgacggcatccagatcaagcccggctctaccaacatctggatcgaccgctgctcc
ctcgccgactacgacgacgggctcatcgacatcacgcgccagagcaccgacatcaccgtc
tccagatgccactttgcaaggcatgacaagacgatgctcatcggcgcggacccaaagcac
gtcgacgacaggtgcatcagggtgaccatccaccactgcttcttcgacggcacgcggcag
aggcacccgcgcctgcgcttcggcaaggtccacctctacaacaactacaccagggactgg
ggcatctacgccgtctgcgccggcgtcgaagctcagattgtgtctcagtgcaacatatac
gaaggaggacataagaagacggtcttcaagtacatgccagagaaggctgctgacagagaa
gagacggcggccgggtggatcaggtcggagggcgacgcgttcctgcacggggcgttgccg
tgcctggtcgacggcccgggcgccgagtgcgtcttcaggccggaggagtactacgacagg
tggacgatggaggcggcgtcgccggcgctcaaggaggtcattcagctctgcgctgggtgg
cagcctgtgcccaggcctccggactgctag
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