Triticum dicoccoides (wild emmer wheat): 119362176
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Entry
119362176 CDS
T07278
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119362176
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119362176
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119362176
NCBI-ProteinID:
XP_037483272
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Position
2B:complement(65469509..65471496)
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AA seq
389 aa
AA seq
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MGARASCFSRLCCCWISFPSSDPRPPHPPPTPAAAAAAYLPCPGMDTEAGPGTVTTAARR
PPQPRTPYADADRTLRALAAAAEGFGRRAIGGLHGALYHVTSLQDDGHGTLREACRAKEP
LWVVFEVSGDIHLQTYLRVSSHKTIDGRGQRVRLTGKGLQLKDCHHVIVCNLQFEAGRGH
DVDGIQIKPGSTNIWIDRCSLADYDDGLIDITRQSTDITVSRCHFARHDKTMLIGADPAH
VDDRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRDWGIYAVCAGVEAQIVSQCNIY
EGGHKKTVFKYMPEKAADREETAAGWIRSEGDAFLHGALPCLVDGPGAECVFRPEEYYDR
WTMEAASPALKEVIQLCAGWQPVPRPPDC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcccgtgcctcctgtttctcccgcctctgctgctgctggatctccttcccctcc
tccgacccccgtcccccgcatccccctccgactcccgccgccgccgccgcagcctacctc
ccctgccccggcatggacacggaggcggggcctgggacggtgacgacggcggcccgccgc
cccccgcagccgcggacgccctacgccgacgcggaccgcaccctccgcgcgctcgccgcc
gccgccgagggcttcggccgccgcgccatcgggggcctccacggcgccctctaccatgtc
acctccctccaagacgacgggcacgggacgctgcgggaggcgtgccgggccaaggagccg
ctgtgggtcgtcttcgaggtgtccggcgacatccacctgcagacctacctccgggtctcc
tcccacaagaccatcgacgggcgcggccagcgggtccggctcaccggcaaggggctccag
ctcaaggactgccaccacgtcatcgtctgcaacctccagttcgaggccggccggggccac
gacgtcgacggcatccagatcaagcccggctccaccaacatctggatcgaccgctgctcc
ctcgccgactacgacgacggcctcatcgacatcacgcgccagagcaccgacatcaccgtc
tccagatgccactttgcaaggcatgacaagacgatgctcatcggcgcggacccggcgcac
gtcgacgacaggtgcatcagggtgaccatccaccactgcttcttcgacggcacgcggcag
aggcacccgcgcctgcgcttcggcaaggtccacctctacaacaactacaccagggactgg
ggcatatacgcagtctgcgccggcgtcgaagctcagattgtgtctcagtgcaacatatac
gaaggaggacacaagaagacggtcttcaagtacatgccggagaaggctgctgacagagaa
gagacggcggccgggtggatcaggtcggagggcgacgcgttcctgcacggtgcgctgccg
tgcctggtcgacggcccgggcgccgagtgcgtcttcaggccggaggagtactacgacagg
tggacgatggaggcggcgtcgccggcgctcaaggaggtcattcagctctgcgctgggtgg
cagcctgtgcccaggcccccggactgctag
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