Torulaspora delbrueckii: TDEL_0A07880
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Entry
TDEL_0A07880 CDS
T02236
Symbol
TDEL0A07880
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0A07880 (TDEL0A07880)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0A07880 (TDEL0A07880)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TDEL_0A07880 (TDEL0A07880)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TDEL_0A07880 (TDEL0A07880)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_HEAT_N
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
Cactin_mid
Spo16_N
Motif
Other DBs
NCBI-GeneID:
11503158
NCBI-ProteinID:
XP_003679331
UniProt:
G8ZNC6
LinkDB
All DBs
Position
1:1372358..1378603
Genome browser
AA seq
2081 aa
AA seq
DB search
MQSARSTSYEIKQEKEAVHIVISQISLLLTALTERNFKEIEKKIDFLLEKSPFAVYIKYW
EKLLVLCSRDIKNNHTLAPQDNLIHRLLATQFLKLPLKAPGAQDTLSREIFSNFAFLDQC
GLKSEDLEVLFDATTNDLILESVNPNITIKKLASTLEIKMNNINYFQNFLLQSAATTLES
NLTDLLHSLEGESLNDMVALMLSEVISPGSQRVQQETQERWLNPQSAAEATNIGNTIFKS
IDKLPKDAINWNRVFNLMSTKYFLTTLIKPTIASLSSFFACLQRGRLIDQFFGCDWDMTF
KLDLAFLLHQWSPQQGCFDLLSVEGTRKVTDLVPNSKGSLLYLLSVASLDLELFLLRDEL
SSNPMLPYYQECFFEDFNQVPELLGFALLSNMKHFTLLVENKTIINEIMVTLLVQTFERS
PDVLGPLIEAIPDNDRILEATRIILSKEKLRPSELVKILAIKGKLDNLIEQLSFAEALKI
TPCARKVGWLGFEDFIQKRLNINTASLILDTLDLQAKMTDANNPFAVTERFDLPALHFLI
TTMVKFSLKESDLERFEGIQFSLIIAFPRLINYGFGHDQAILSNGDINPIAPDVEKEMQN
YLQKMYSGELAIKDIIDILRKLRDSQNVRDQDVFACMTHAVIAESSFFRDYPLDALATTS
VLFGSMILFQLLRGFVLDVAFRIILNFAKEGPESKMFKFAVQAIYAFKIRLVDYPNYCKD
LLEYVPGLQTQPQVYQSVVEAAKSAERLHSKTPDDARKPVETIPLKYFVLEEPSAQVLQE
NPPKEITEKVLFVVNNITMDNFDVKIIDLKTVLTPNYFSWFSNYLVNQRAKTEPNYHKLY
SRILTSIKSDLLHEYMVAVTCKQLYIFLSTKDAQLIDKNHLKNMAMWLGSITLSLDRPIR
HRNIAFRELLLEAYMEKRLNVVVPFVAKVLQNAADSKVFRPPNPWTVGIVRLLLELNNKA
NWKLSLTFEVEVLLKSLNIDPKSITPTDMIGANNAVDELAGSINSLTVEQRHAEQQRQMM
TMQQYQQQVLLSQQRQQRVISGGLVPSIEQRPVGVETSALAGENPFNNLNGSTIFATHPD
LMRVFQMAMAKSVREVLLPAVDKATSIAVVTTMKIVLKDFATEVDEMKLKAAAIGMVRHL
SQSLARTTAVEPLKEVIVSTTHSLAPNLMGMQNSFVDELNTAINDNLGVALAIIEKAAMD
KATQDIGEQLMQPIAIRRYHKERRAGQPFLTQNTNPYSLTLPEPLGLKSSGVTPQQFSIY
ENLGDHGSNFENAPDATGPPQNQQNHQQILLQQQQARPQQQQHLAPTSQMHVPPVQNQLP
IQNSQGMGIQSELEQNHRVLVHLMDGLVVQIKENADKRGLRDLGEQNSIKAIIFQILSFI
ARSSQKDQLALKVSQAVVNSLFATSESPLCREVLSMLLEKLCSLSIVARKDVVWWLVYAL
DSRKFNVSVIRSLLDVKLIDASELDNVLVTTMKNKMENSVNFSMELIRDTVMSSSPILMR
MDFICTLEYLGTLDDANVKSFLRDYEKEVVLPVELKTKVTNTERYYLVFTEWVKLLQRVE
GDDISTIVFLKQMKDKGVLSKTDQLIEFIKAALELSIFSFKESDPTGEVFTAIDALGKMI
IKLLVVQDFTEMTRADYLNLVFPVIALVFSKDHEQENTTFNERPHFRLLSNFLFEWETIR
GHKFIKVRNVVTRKELLDFDTEFYNIFSSYLQSAQPIAFPGFSFAWVTLISHRMFLPTML
RLPNNAGWKNLMLLLIDLLKFLDKYTDKNEVSNAISVVYKGALRVFLGISNDMPEFLIEN
HLELMNNLPPTYFQLKNVILSAIPKKMMLPNPYDPTLSLEDIAACKEPPKVFYDLIAEFS
TLKKPVDNYLRIPSNSLLKTIISNTYRNEYELKNGIGYDYLSVDNNIVRAIVIHVGIEVG
SEYQRMSSSAVFNTKSAYYTLLFNLIHDGTVELQYQVIQAMVEQLRYPNVHTYWFIFALR
NMFVSEEWGDQLLEVQEIILRNLLERIIVNRPHTWGISVIFTQLITSKEINLLDLPFVKK
LPEVRNLLSPLYRHTSTGNSIDNSNHQLLGNSASGIVDAKV
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagcacgatcaacatcatacgaaattaagcaggaaaaagaggctgttcatatc
gtcatatcacaaattagcttattgcttaccgcgctcaccgagaggaacttcaaggagatc
gaaaagaagattgactttctgcttgaaaaatccccatttgcagtttatatcaaatattgg
gaaaaattattggtgctttgttctagggatataaagaacaatcatactttggcaccacag
gacaatttaatccatagattacttgctacccagtttctgaaacttccattaaaggcacca
ggcgcccaggataccttatcgcgagaaatcttcagtaatttcgcatttttagaccagtgt
ggtttgaaatcagaagatttagaagtactatttgacgccaccactaacgatctcatttta
gagtcagtgaaccctaatatcacaataaagaaacttgcatccacgttagaaataaagatg
aacaatatcaactactttcaaaattttctattgcaatccgcggcgactacgctggaatca
aatctaaccgatttactccattcattagagggtgaaagcttgaacgatatggtggcactt
atgttatcagaggttatttccccaggatctcaacgagtacaacaggaaacacaagagagg
tggctcaatcctcagtccgctgcagaggctacgaacataggtaacacgatcttcaagtcg
atcgataaactcccaaaggatgctatcaactggaatcgtgttttcaacttaatgtccacc
aagtactttctcactacactgataaaaccaaccatagcatctctcagttcctttttcgcc
tgtctacaaagagggcgcttgatagatcagtttttcggctgtgactgggacatgactttc
aagttagacttagcttttcttttacaccaatggtcaccacaacagggttgttttgacctt
ttgagtgttgaaggcacaagaaaagttacggatctagttcctaattccaaaggatcgcta
ctttatctattgtcagtggcttcactggatttggaattgtttttgttgagagatgaacta
tcgagcaatccaatgttgccatattaccaggaatgctttttcgaagacttcaaccaagtt
ccagagcttcttggctttgctttactatccaatatgaaacattttactctattggtagag
aataagaccataattaatgaaatcatggtcactctactggttcaaacttttgaaagatca
ccggatgtactgggccctctcattgaagctatcccagataacgatcgcatcttggaggcc
accaggatcatattaagcaaagaaaaattacgtccctcagaattggtaaaaattctagcc
ataaagggtaaactggacaatttgattgagcaactatcttttgcagaagcactcaagatt
actccgtgcgcgagaaaagtgggatggttaggatttgaggatttcattcaaaagagactc
aatatcaatactgcgtctctaattttagatactttggatttgcaagcgaaaatgacggac
gcaaataaccctttcgctgtgacagaaagattcgatctaccggctttgcatttcttgatc
actaccatggtcaaattctcactgaaagaaagcgatttggaacgttttgaaggtatacaa
ttctcgttgatcattgcatttcctcgtttaataaactatggttttgggcatgaccaagcg
attttgagtaatggagatataaatcctattgctcctgatgtggagaaagagatgcaaaac
tacttacagaagatgtacagtggcgaactggcaataaaagatataattgacattctgaga
aagcttagagacagtcaaaatgtcagagaccaggatgttttcgcttgtatgacacacgct
gttatcgcagagtctagcttttttagagattatccacttgatgcgctagcaacgacatct
gtcctctttggctctatgatactgttccaactacttcgtgggtttgtgctagatgttgct
ttccgaatcattctgaattttgcaaaggagggacctgagtctaaaatgttcaaatttgct
gtacaggctatttatgcattcaagattagacttgttgactaccccaattactgtaaagac
ttgctggaatatgtcccaggactacaaactcaacctcaggtctatcaatctgtcgttgag
gcagcgaagtcagcggaaagactacatagtaaaactccggacgatgcaagaaaacctgtt
gaaacgattccactcaagtattttgtgcttgaagaaccatcagcccaggtattacaagag
aaccctccaaaggagataactgaaaaagtgctctttgtcgtgaataacattaccatggat
aacttcgatgtcaaaattatagaccttaaaaccgtgctgacgcccaactacttttcttgg
ttttcgaattatctcgtcaaccaaagggcaaaaacggaacctaactatcataaactttac
agcaggattttgacgtcgataaaatctgaccttttgcatgaatacatggtcgcagtgacc
tgcaagcagctgtacatttttctgtcgaccaaagacgcccagctaatagacaaaaatcac
ctcaaaaacatggcaatgtggcttggaagcatcaccttgtcgctagataggcctatcagg
catcgcaacatagcgttcagagaacttctattggaggcctacatggaaaagcggctaaac
gttgtcgttcccttcgtcgctaaagttttgcaaaacgctgctgactcgaaggtttttaga
ccaccaaatccttggactgttggaattgtcaggctcctcctggaattgaataataaagct
aactggaagttgagcttgacctttgaggtcgaagttctgcttaagtctcttaacattgat
cctaaaagtattactcctactgacatgattggtgcgaacaacgctgttgatgaactggct
ggtagcattaacagtttgacagtagaacaaaggcacgcagagcagcagagacaaatgatg
accatgcagcaataccagcagcaggtacttctctcccaacaaagacaacaaagggttatt
tctggtgggttggtaccttctatcgaacaaagacccgtcggagtggaaacctctgcatta
gcaggtgaaaaccctttcaataatctcaatggttctaccatttttgctacccatccagac
ttaatgcgtgtttttcaaatggcgatggccaaatctgtcagggaggtgttattgccggct
gtagacaaggctactagcatcgcggtggttactacgatgaagatagttctcaaagatttc
gccactgaagtggatgagatgaaactgaaggcagcagccataggaatggtcaggcatctt
tcccaaagtttagctcgtactacagctgtagagcctttaaaagaagtgatcgtatcaacc
acgcactctttagcaccaaatctcatgggcatgcagaattcatttgttgacgaactgaat
actgcaataaatgacaatttaggcgtggcccttgccatcattgagaaggcggctatggat
aaagcgacccaggacattggtgagcagttgatgcaacctatagcaattcgccgctatcat
aaagagagaagggcgggccaaccatttttaacccaaaacacaaatccttactcattgaca
ttaccagagcctttaggtttaaaaagttctggtgtaacaccccaacagttctcaatatac
gaaaacttgggagatcacggctcaaactttgaaaacgcaccggatgcgaccgggccacca
cagaaccaacaaaatcatcagcagatactcctgcaacagcagcaagctcgtccacagcaa
cagcagcatcttgcaccaacttctcagatgcatgtgccgccagttcagaaccagcttcca
attcaaaactctcaaggcatgggcatccagagtgaattggaacaaaatcatcgcgtgctt
gttcatttgatggatggactagttgttcaaatcaaagagaacgccgacaaaagaggcctc
agagacctaggagagcaaaattctatcaaagctatcattttccaaatattgagttttata
gcccgcagttcccagaaggatcagcttgctctaaaggtctctcaggctgtcgtcaacagt
ctattcgccactagtgagagtccactgtgccgtgaggttttgtcgatgttactggagaaa
ttatgctccttgtccatcgtcgccaggaaagacgtggtatggtggcttgtttatgcgctt
gatagcagaaaattcaatgtgtcggtgataaggtctttactggacgtcaagttgatcgat
gctagcgaactggataacgtattggtcaccaccatgaaaaacaaaatggagaactctgtg
aacttttcaatggaactgataagagacacagtaatgtcaagctcaccaatcttgatgcgt
atggattttatctgcactctagaatatctcggtacactggatgatgccaacgtcaagtca
ttcttgagagattatgagaaggaagttgttcttccggtcgagttaaaaactaaagtcacc
aatacagagaggtactatctggtttttacggaatgggtcaagttactgcaaagagtcgaa
ggtgatgatatttccaccatcgtgtttttgaaacagatgaaagacaagggtgttctgtca
aaaacggaccagctcattgagttcatcaaggcagctctagaattatccatattctcattt
aaggaaagtgacccaactggtgaggtctttacagcgatagatgcactgggcaaaatgata
ataaagctactggtggtacaagattttacggaaatgacaagggcggactatctaaacctc
gttttcccagtcattgctctagtgttttcgaaggatcatgaacaagagaatacaactttc
aatgagaggcctcatttcagactgctttcaaacttcctattcgaatgggagactattcgg
ggccataagtttatcaaggtgcgtaatgtggtaacgcgtaaggaattacttgatttcgat
acagagttttacaacatcttctcttcctacttacagtctgcgcaaccgattgctttccct
gggttttctttcgcatgggtaactttgatctcacacagaatgttcttacccaccatgctt
cgactacccaacaacgcaggatggaaaaatctgatgctattgcttattgacctattgaag
ttcttggataaatacacggacaagaatgaggtctccaacgccatttcagtcgtctataaa
ggtgcattgcgtgtctttttgggtatctcgaatgatatgccagagtttttgattgagaac
cacctcgaattaatgaacaacttaccaccaacctactttcagttgaagaacgttattctt
tcagcgattccaaaaaagatgatgctaccaaacccatacgacccaactctttctttggaa
gatatcgctgcctgtaaggagccaccaaaggtgttttatgacctaatagcggaatttagc
acgctgaagaaaccggtcgacaattatctgcgcattccatcgaattcgttgctcaaaact
attatcagcaacacctatagaaacgagtatgagctgaagaatggtattggttatgactac
ttgtcggtggacaataatattgtgcgtgccattgtaatccacgtcggaatagaggtagga
tcagagtaccagagaatgtcctccagcgctgttttcaacaccaaatctgcctattacacg
ttattgttcaacttgattcatgacggtacagtcgagctacagtaccaagttattcaagcg
atggttgagcagctaaggtatccaaacgttcacacctactggttcatttttgcgctgaga
aacatgtttgtctccgaagaatggggtgaccagcttctcgaagtccaagagataattttg
agaaacttactagagaggatcattgtcaatagacctcacacttggggtatctctgtcatt
ttcacacaactcattacaagcaaggagatcaacttgctcgatttgccatttgtcaaaaaa
ctaccagaagtaaggaatctactgtcgccactctacaggcatacctccacgggcaacagt
attgacaattcgaaccaccagcttttgggaaactctgcttcaggcatcgtcgatgcaaaa
gtatga
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