Triplophysa dalaica: 130409746
Help
Entry
130409746 CDS
T09616
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130409746 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130409746 (exosc10)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
130409746 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
130409746
NCBI-ProteinID:
XP_056589892
LinkDB
All DBs
Position
20:complement(8391867..8402623)
Genome browser
AA seq
902 aa
AA seq
DB search
MAASSSSAASIKHNEQSAPSKETDAETEFCPGFEDADAFVKHGLGCVVAATKASAALPQA
GDEFDLYRSFPAFEEFCASQGDRLLHCMSQIMQKHGCKSHMKDRNKLTGLEDRFDLVVDS
NDAILEKVGILLDEASGVNRTQQPVMPVGYQPPKIVVSSWNRGGGQATETFHLLHAKNIQ
RPQLKFKEKVDNSNTPAVSKIFIKPNALKPLPSYFTDKHIRKERPEDLDVPAALADFIHQ
QRTQEHVDDMFSHPYQYELDHLAMPESLNCKHEPQMYKSIAETSFKFINMLEDLVALNEK
LAKVSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLQLRSEMYILNETFTDPAIVK
VFHGADSDIEWLQKDFGLYVVNMFDTHQAARALNLGRNSLDHLMKFYCEVESDKRYQLAD
WRIRPLPDEMLKYARADTHYLLYVYDRVRADLYDMGNGQPTLIQQVWSKSRDLSLKKYVK
PIFTEDSYMELYRKQKKSYNTQQLAAFRMLHAWRDKLARVEDESTGYVLPNHMMMKIAEE
LPKEPQGIIACCNPTPPLVRQQVNELHQFMKQAREIPLLKAEYSLERKKSVTPKRKLQSS
LFGPHDTSRSSESDFLDLSSIETPTKPGVLFSEEEEEEECMDEDLKSLSGLIASAKISLF
AENQEKVPASGHLTVAQQKAHSIMASFENPFRMYLPSKEIHISEKAKYDPSSKIYEIHNR
WKLQSIEQQQKEVQAKRQAKEQAKKAQEERKKTKQSYQESLENVQSVRHQVMEAKQSGQK
RERVASDVNEESVKTTTKVLQADTESTQKDKSSTPVPKKHKAKALQDPQDSTQNFKPFDY
SQSNMKMFDGKSKESSQFDPNRLDPESKQKKRQKKQSSLGGRTMSYVPATSERGFRHNWP
KR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcctcgagtagtgctgcttctattaaacacaacgagcaatctgcgccatct
aaggaaacagacgcagaaacagagttttgtccaggttttgaagatgctgatgcgtttgtc
aagcatgggttgggatgtgtggtcgctgccacaaaggcgagtgcggctcttccacaggcc
ggagatgagttcgatctgtaccgcagctttcctgcgtttgaagagttctgcgcgtcacag
ggagatcgccttttacactgcatgagtcagatcatgcaaaaacatggctgtaaatctcac
atgaaagacaggaacaaactgacgggtctagaggaccgatttgacctggtggtggattcc
aacgatgccattcttgagaaagtgggcattctcctggatgaagcctctggggtgaaccgc
acacaacagcctgtgatgcctgttggatatcagcctcccaagattgttgtgtctagttgg
aatcggggaggaggtcaagccactgaaacctttcatcttctacatgctaaaaacattcag
cgtccacagctgaagttcaaggagaaagtggataacagcaacactcctgctgtctccaaa
atctttatcaaacccaacgctttaaaacctctgccttcatattttaccgacaaacacatt
cggaaggagagaccggaggatttggatgttcctgctgccctggcagattttatccatcaa
cagagaacacaagagcatgtggatgatatgttttctcacccctaccagtatgaattggat
catctggccatgccagagagcctgaactgtaaacacgaaccacagatgtataaatcaatt
gctgagaccagctttaagtttatcaacatgttggaggatcttgttgctttgaatgagaag
ttagccaaggtgtcagagtttgctgtggatttggagcatcattcctacagaagttttcta
ggaatcacgtgtctgatgcagatatcgacacgtgaggaagatttcatcatagacacgctg
caactgcgcagtgaaatgtacatcttaaatgagacgttcactgaccccgccattgtgaag
gtgtttcatggggctgactctgacatcgagtggctgcagaaggactttggtctctatgtt
gtcaacatgtttgacacccatcaggctgctcgtgccctgaacctcggcagaaactccctc
gaccatctcatgaagttctactgtgaggtagaatctgataaacgctaccagctggccgac
tggaggatacgacctttgccagacgagatgttgaagtacgctcgggcggacactcactat
ctgctgtacgtgtatgatcgagtacgggccgacctttatgatatgggaaacggacagcct
accctcattcagcaagtctggtctaaaagtagagacctttcactcaagaaatatgtgaag
cccatctttactgaggactcgtacatggagctttaccgtaagcagaagaagagttacaac
acgcagcagctagctgccttcagaatgctgcacgcctggagagataaactggcccgagtt
gaagatgagagcactgggtatgtcttaccaaaccatatgatgatgaagatcgcagaggag
cttccaaaggaaccccagggcatcatcgcctgctgtaacccaactccacctctagtgcga
caacaggtcaatgaacttcatcagtttatgaaacaggctcgagagattcctctcctgaag
gcagagtactctctggaaagaaagaaatctgtaaccccaaaaagaaagctccagtcttca
ttatttggacctcatgacacgtcccgttcatctgaaagtgatttcctggacctctcctcc
atagaaaccccaaccaaaccaggagtgttattttcagaggaggaggaggaggaggagtgt
atggatgaagatctaaaatcattgtccggtctaatagcttctgcaaaaatcagtctcttt
gcggagaatcaggagaaggttcctgcctctggtcatctgacagtagcacaacaaaaagcc
cacagcatcatggcctcctttgagaatcctttccgaatgtatttaccatcaaaggaaatt
cacatatcagaaaaagccaaatatgacccatcttcaaagatttatgagattcataaccgc
tggaagttgcagagtattgagcagcagcagaaggaggttcaagccaagcggcaagctaaa
gaacaagctaagaaagctcaagaggaacgtaagaaaaccaaacagagctatcaggagtca
ctggaaaatgttcagagtgtcaggcatcaagtaatggaagcaaagcagtccggccaaaag
agagagcgtgtggctagtgatgtaaatgaagagagtgttaaaacgaccacaaaagtcttg
caggcggataccgagagcacacagaaggataaatccagcacgcctgttcccaaaaaacac
aaagccaaagctctccaagatcctcaagactccacacagaactttaaacctttcgactac
agccagtcaaatatgaaaatgtttgacggcaaatctaaagagagttcgcagtttgatcca
aacagactagatcctgaatccaagcagaagaaaagacaaaaaaagcaaagttctttagga
ggcaggaccatgtcttatgtacccgcaacatctgagagaggttttcgtcataactggccc
aagagatag
DBGET
integrated database retrieval system
