Triplophysa dalaica: 130413886
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Entry
130413886 CDS
T09616
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
130413886
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130413886
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130413886
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF2894
Motif
Other DBs
NCBI-GeneID:
130413886
NCBI-ProteinID:
XP_056595394
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Position
24:complement(6858117..6866465)
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AA seq
858 aa
AA seq
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MPKQQPQQNRELELDHLVRQSPLHSPRTPSPSYPSSVLDHPNVPSYPRLPPITPSRQLSG
VSNPALHIEDDSNSARPSVSSRLSVHPAVNVEDVDSDRGKGGRRSRPIPLIIKPQEPNLK
TLTVPGVRKATRTRDRKPQTIWNKIKRLYSQDDEEEEEIETAVRAWPSQSSISSADGGYQ
NKDSHKCKIHMLNQRPASSASQASTVVNERLQELVKLFKERTERVKEKLIDPDNSDDGTP
PASPAKQAPAPPPEPPAEQKTEQEVPDTTVEKEEEKTTVLCCKVKPQSRLARFLRYRFPA
SIDPFTNLIYVLWLFCVSLAFNWNVWMIPVRWAFPYQTPDNIHVWLLIDYICDTIYILDI
LAFQPRLQFVEHGDIVSSKKEMRNNYTKALRFKLDLISLLPLELLYFKTGINPLLRLPRL
MKFMSFFEFNKRLEAILTNAYVYRVIRTTTYLLYAVHCNACLYYWASAFEGLGVSQWVYD
GQGNSYIRCYYFGVKTLLTIGGLPEPTTLFEIVFQLINYFIGVFVFSIMIGQMRDVVGAA
TAAQTSYRACVDNTVKYMASYNIPKNVQNRVKTWYSYTWQSQGMLDEQELLDQLPDKMRL
DIAVDVSYNIINKVPLFQGCDRQMIFDMLKRLKSVVYLPGDYVCKKDEVGREMYIIKAGE
VQVVGGPDGKTVFVTLKAGAVFGEISLLAVGGVNRRTANVIARGFANLLILTKMDLNEIM
VHYPESQKLLRRKARKMVTKDKKPAEKKEEEKESVPIIPPRAETPKLLKAALEMSEKSGK
KGTWTKLKERSNRSSVSLQRSISSTATPNSPAHEPNSEQEPDALSQISDSSMQIPTTPTG
SGDGNVFAEDGPNEEEAK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcagcaaccgcagcagaatagagaactggagttggaccatctcgtccgccag
tctcctctccactcccccaggaccccctctccttcctacccaagctccgtcctagaccac
cccaacgtgccctcgtacccccgtctgccacccatcaccccttccaggcagttgtcaggt
gtctccaaccctgccttacacattgaagatgattccaactctgctagaccctcagtgagc
tccagactgagcgtgcacccggccgtgaatgtagaagatgttgattctgaccgaggtaaa
ggtggaaggagatctcgtcccataccattaatcataaaaccacaagaacccaacctgaag
accctaactgtacctggtgttcgcaaagccacccgcaccagagacagaaaaccacaaaca
atttggaacaagatcaagagactctactctcaagatgatgaggaagaggaggaaatagaa
accgcagtcagggcctggccgagccaaagtagcatctccagcgccgatggcgggtaccaa
aataaagattctcataaatgcaaaattcacatgcttaatcaacggcccgcctcttcagcc
agccaggccagcacagtagtgaacgagaggttgcaggagctggtgaagctgtttaaagag
agaacagagcgtgtcaaggagaaactaattgatccagataactcggatgatgggacacca
cctgcctctccagctaagcaagctccagcgccccctcctgagcctccagcagagcagaaa
acagagcaggaggttcccgataccactgttgagaaagaagaggaaaaaacgacggtccta
tgctgtaaggtcaaacctcagtccaggcttgctcgatttctgcgctaccgtttcccagct
agcatcgacccctttactaatttgatctacgtgctttggctgttttgtgtgtctttggcg
tttaactggaacgtgtggatgattcccgtgcgttgggcgttcccttatcaaacccctgat
aatatccatgtatggctgttgatcgactacatatgtgataccatttacattctggacatc
ttggcctttcaaccccgactgcagttcgtggaacatggggacattgtgagcagcaagaag
gaaatgagaaataattacaccaaagctttacgattcaagctggacctgatcagtcttctt
ccactggagcttctctacttcaaaacaggaattaatcctctcctccgcttaccaaggcta
atgaagtttatgtctttctttgagttcaacaaacgtctggaagctatcttgaccaatgca
tacgtttacagagttattcgaaccaccacgtatctgctgtatgctgtccactgtaatgct
tgtctttattactgggcctcagcttttgaaggtctgggtgtttcccaatgggtctatgac
ggacagggaaacagttatatccgctgttactactttggcgttaagactttgctcaccatt
ggtggcctgccggaacccacaacactttttgagattgtgtttcagctcatcaattacttc
atcggagtctttgtgttctctattatgattggtcagatgagagatgttgttggtgccgcc
acagccgctcagacaagctatcgtgcttgcgtggacaacacagtgaaatacatggcatct
tacaacattcctaagaatgtgcagaacagagtaaaaacctggtacagctacacgtggcag
tcccaaggcatgctggatgaacaagagttgctagatcagttacctgataaaatgagactg
gacattgctgtggacgtgagctataacattatcaataaagtgccactttttcagggttgt
gatagacagatgatctttgacatgctgaagagactcaaatctgtggtgtaccttccagga
gactacgtctgcaaaaaggatgaagtgggccgtgagatgtacatcattaaagctggggaa
gtccaggtagtcggtggtccggatggaaagacggtgtttgtgaccctgaaagcaggagcg
gtgttcggagagatcagcttgctggcagtgggaggagtgaacagacgtacggctaatgtc
atagcacgtggttttgctaacctcctcatcttgaccaaaatggacttgaatgagatcatg
gtgcactacccggagtcccagaaacttctccgcaggaaagcaaggaaaatggtgacaaaa
gataaaaagccagctgagaagaaagaagaagagaaggagtccgtccccattattcctcct
cgtgccgagacacccaaactgttaaaggcagcattggagatgtctgagaaatcaggcaag
aaaggaacatggaccaagttgaaagaaagaagcaacagatcaagtgtctccttacagcgt
tccatctcttcaactgcgacgcccaactcgcccgcccatgaaccaaactcagagcaggaa
ccagacgccctgtctcagatatcagacagctcaatgcaaatccctacgacccccaccggc
tctggagatgggaatgtatttgctgaagatggcccaaatgaggaggaagcaaagtag
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