Triplophysa dalaica: 130427184
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Entry
130427184 CDS
T09616
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130427184 (scn1laa)
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130427184 (scn1laa)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
Zip
FixH
Motif
Other DBs
NCBI-GeneID:
130427184
NCBI-ProteinID:
XP_056610320
LinkDB
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Position
8:23466540..23494545
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AA seq
1961 aa
AA seq
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MAQTFTPPGPKSLRLFTRESLKAIEGRIAEENGKKSKDKRERIDDDGTKRKPNSGLEAGK
KIPIIYGDVPRGMVSTPLEDLDRFYSNETNFIVVNKQNAIYRFNATPALYIFSPFNPLRR
ISIKILVHSLFSMFIMFTILANCAFMTYTKPPDWAKNLEYAFTGIYTFEALIKIVARGFC
VGKFTFLRDPWNWLDFIVIVMAYVTEFVDLGKVSALRAFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTLFCLSVFALVGLQLFMGSLRTKCVRMPPNSTMNNNSELEFDWTLA
CNHSSEYCFENYLNNPDNLYIMAGKKDALICGKSRDAGKCPPGYYCIKAGRNPDYGYTSF
DSFGWAFLSLFRLMTQDYWENLYQQTLRAQGKTYMIFFVLVIFLGSFYLVNLILAVVAMA
YDEQNQATIDEALKKEEEFNSMIEQIMRQEEEEAAAKTKTEEPSGEMTDSSSNNSKLSSK
SAKERRNRKKQRQRQEEKDDDLKKDGSVKKTSFNIPDRNNRSSYERTCTSPRQSPLSVQD
SVFPIRRDSKSSVFSFRGRVRSENNYADDERSVCGETDSRRDSPFLPPRSERLYSNDSKG
SLTPRVLLPSNGKMRYVVDSNSIVMVSGDSSMPNSPSGLLTPEMSRKRAMFGDFCADTDE
EYRGRCNSQRLARALLHDQSARKRALSVASGSNNPSDSMQVWKQKCVYWSYEFAENYMIW
DCSPTWLKIKNIVHTVVMDPFADLFITICIVINTVFMAMEFYPMDNSFSNLLSTGNQVFI
VIFTAEMILKIIALDPYMYFQEGWNIFDSIIVSLSLLEVCLAKVLPGKGFLRPFRLLRIF
KLAKSWPTLNMLIKIIGNSLGALSNLTLVLAIIVFIFAVVGTQLFGKSYRDCVCKISSDC
TLPRWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGPPMCLIVFMMVMVIGNLVVLNLF
LALLLSSFSADNLAVSEDEVEKNNLQIAVGRIKTAFTVIKVSLRRFCRSGCVKRKKQKKE
ADGQLNDHTSLELFPKTSLIDIDKETEHIISNPSLTVSVPIAEEESDFVCLNTEDFSSLS
SDPVEENEKLDDVDASSSEGSTVDLRYFGHARDGEGSLEVEPDQSTDPEACFTAGCVQRC
PCCQVNVEKGFWKTWWMLRQACFRIVEHSWFETFIIFMILLSSGALAFEDVYLNSQKNIK
IILEYADKIFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFIIVDVSLISLVANALEFSDL
GAIKSLRTLRAFRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIVGVNFF
AGKFYQCVNTTSNERLPLSIVKDETDCNNMNETGDILWRNVKINFDNVGNGYLALLQVAT
FKGWMPIMYAAVDSRSVKEQPEYESNLYMYLFFVIFIILGGFFTLNLFIGVIIDNFNQQK
KKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNKIQGFVFDLVTNQAFDIFIMVL
IWLNMVTMMVESHDQSKEKTLVLYWINIVFIGLFSGECVLKMISLRQYYFTIGWNVFDFV
VVILSIVGMFLSELIAKYFVSPTLFRVIRLARIGRVLRLIRSAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYSIFGMSSFAYVKKSDGIDDMFNFETFGNSMLCLFQITTSAGWDGLL
APMLNTQPPDCDPKKTFSDGTVVGDCGNPMVGISFFVSYIIICFLVVVNMYIAVILENFS
VATEESADPLSEDDFDRFYEVWEKFDPKATQFVEYNKLSDFADALDPPLRIPKPNRLRLM
CMDLPMVNGERIHCLDILFAFTKRVLGEGGEMDILRGQMEERFMASNPSKVSYEPITTTL
RRKHEDTSAAVIQRAFRKHKVRLGIRKMGNMHIETKKQNGKVPRNESKDNENCNDNTENS
DLTPSTSSPPSYESATPENKNKYKKDKREKEVKGKDNGKTD
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagacgtttactccaccaggaccaaaaagtctccgattgttcacccgtgaatct
ctcaaggccatcgagggcaggatcgcagaggagaacggcaagaagtcaaaagacaagcgg
gagagaattgatgacgatggaaccaaaaggaaacccaacagcggcttggaggctggcaaa
aaaataccgattatctatggagatgttcccagaggaatggtctccacaccgctggaggac
ctggaccggttttacagcaatgaaaccaattttatagttgtaaacaaacaaaatgccatc
taccgattcaacgccactcctgccttgtacatcttcagtccctttaaccctttaaggaga
atatcaatcaagattttggtacattcattgtttagcatgtttataatgttcactatattg
gccaactgcgctttcatgacctacacaaaaccccctgattgggccaagaatctagagtac
gctttcactgggatatacacctttgaagcgctcataaagatcgttgccaggggcttctgt
gtgggcaagttcacattccttagagacccatggaactggttggattttattgttatagtc
atggcatacgtaacagagtttgtggatctgggtaaggtctccgccctgagagcgttcaga
gttctgcgagccctgaaaactatatcggtcatcccagggctgaagacaatcgtgggagct
ttaatccagtcagtaaagaaactgtccgacgtgatgatcttgacccttttttgcctaagt
gtcttcgctctggttggactccaactcttcatgggatctttaagaactaaatgcgtgcgg
atgccacccaattccacaatgaataacaattcggagctggaatttgactggacattggcc
tgtaaccacagttctgagtactgctttgaaaattatttaaataatcctgacaacctttac
atcatggcaggaaagaaagacgctttgatctgtggaaaaagtcgtgatgctgggaagtgc
cccccgggatattactgtattaaagcaggtcgcaatccagattatggttacaccagcttt
gatagctttggctgggcctttctttccttattcagactgatgactcaagactactgggag
aatctttaccaacagactcttcgggcccaagggaagacctacatgattttttttgtgctg
gttatcttcctgggatccttctacctggtgaatctgattctggctgtggttgccatggca
tacgatgaacagaaccaagccactatcgacgaggctctgaagaaagaggaggagttcaat
tccatgatcgagcagatcatgagacaagaggaggaagaggcggctgctaagaccaagact
gaggagcccagcggagagatgacggacagttcttccaacaactccaaactgagctccaaa
agcgctaaagagagacgcaaccgcaagaaacagcggcagcgtcaggaggagaaagacgac
gatttgaagaaggacggtagcgttaaaaagacaagtttcaacatcccagacagaaacaac
cgtagctcatatgaacgtacttgcacatctccacgtcagtcccccttaagcgttcaagat
tcggtctttcccatacggcgtgacagcaaatctagcgtcttcagcttccgtggccgcgtg
cgttccgaaaacaactatgcggacgacgagcggagcgtgtgcggggagacggacagccgg
agggactcgccttttcttccgcctcgttctgaacgtctgtacagcaatgatagcaaaggc
agcctgactccacgtgtgctgcttccctctaacggaaagatgcgctacgtggtcgacagc
aacagcatagtgatggtgtctggggactcgtccatgcccaactccccctctggactgcta
acgccagagatgtccagaaaaagagccatgtttggagacttctgtgcagatacagatgaa
gaatacagaggaagatgcaactcgcagcgactcgcacgagctttattacatgaccagtca
gcccggaagagagcactgagcgtggccagtggttccaacaatccctctgactccatgcaa
gtgtggaagcagaagtgtgtgtattggagctacgagtttgcagagaactacatgatctgg
gattgctcccccacttggctgaagatcaagaatattgtccacacagttgtgatggaccct
tttgcagacctcttcatcaccatttgtattgtgataaacaccgtgtttatggcaatggag
ttttatcccatggataatagtttttccaacctcctttcgaccgggaaccaggtgtttata
gtcatctttaccgcagaaatgattttgaagatcattgctttggacccgtacatgtatttc
caggaaggctggaacatctttgacagcatcatagtctctctgagtcttctggaggtttgc
ctcgccaaagtcttgcctggaaaggggtttctcaggccgtttcgactgttgaggattttc
aaactagccaagtcctggccgactctcaacatgctcatcaaaatcatcggcaactcgctg
ggcgccctgagcaatctgacgctggtgctggccatcatcgtcttcatcttcgccgtggtt
ggaacgcagctgtttggaaagagctatcgtgactgcgtgtgtaagatctccagcgactgc
actcttcctcgctggcacatgtccgatttcttccactcgttcctgatcgtcttcagggtg
ctctgcggcgagtggatcgagaccatgtgggactgcatggaggtggcgggaccgcccatg
tgtttaatcgttttcatgatggtcatggtgatcggaaatctggtggttctgaacctgttc
ctcgctctgctgctcagctccttcagtgccgacaatctcgctgtctctgaagacgaagtc
gagaaaaacaacctgcagatagctgtcggtcgaatcaagacagcgttcaccgtcatcaaa
gtcagtctgcgccgtttctgccgtagcggctgtgtgaagagaaagaagcaaaagaaagaa
gcagacgggcaactgaacgatcacacctcattggagttgtttccaaaaacctcactgata
gacattgacaaggaaaccgagcatattatcagcaacccgagtttgaccgtcagtgtcccg
atagctgaagaggagtctgattttgtctgcctgaacactgaagacttcagcagtctctct
tcggaccccgtggaagaaaatgagaagttggatgatgtggatgcaagctcttctgagggc
agtacggtagatctcagatactttggacatgctagagatggagaagggtctttagaggtt
gagccggatcaatctacagatccagaagcctgctttacagctgggtgtgtccagaggtgc
ccgtgctgtcaggtgaatgttgaaaagggcttctggaagacctggtggatgctgagacaa
gcatgcttcaggatagtggaacacagctggtttgagacctttatcatcttcatgattctg
ctcagcagtggcgctctggcgtttgaggacgtttatctcaactcacagaaaaatattaag
atcattttggagtatgcggacaaaattttcacgtacatcttcatccttgagatgctgttg
aaatgggtcgcatatggatttgtcaaatacttcaccaatgcgtggtgctggctggacttc
attattgttgatgtttctctgatcagtctggtggccaacgcccttgagttctccgactta
ggcgccatcaaatctctccgaacccttcgggccttcagacctctccgagctttgtcacgt
tttgagggaatgagggtggtggtgaatgctctgctgggcgccatcccctccattatgaac
gttctgctggtgtgtctcatcttctggctgatttttagcattgtgggtgtcaacttcttc
gccggaaaattttatcaatgcgtgaacacaacctcaaatgaacggcttcccctttcaata
gtcaaagatgaaacggactgtaacaacatgaatgaaaccggggatatcctctggagaaat
gttaagattaactttgataacgtgggaaatggatatctggcccttctgcaggtggccact
tttaaaggctggatgcccattatgtatgcggctgtggactcacgcagtgtcaaggagcag
ccggagtatgaatctaatctgtatatgtacctgtttttcgtaatcttcatcatccttgga
ggttttttcacattaaacctcttcattggtgtcattattgacaacttcaaccagcagaag
aaaaagtttggaggtcaggacattttcatgacagaagagcagaagaaatattacaatgca
atgaaaaagcttggctccaaaaaacctcaaaaacccattccgagaccaacgaacaagatt
caaggatttgtctttgaccttgtgaccaatcaggcctttgacattttcatcatggttctt
atatggctcaacatggtcaccatgatggtggaatcacacgatcagtcaaaagagaaaacc
ttggttctctactggatcaatattgtctttatagggctgtttagtggtgaatgtgtgctg
aagatgatctcgctacgacagtactacttcaccatcggctggaatgtattcgactttgtc
gtggtcattctgtctatagttggaatgtttctttcggaactcatcgcaaagtactttgtc
tcaccgaccttgtttcgcgtaatacgccttgccaggatcggtcgcgtgctgcgtctcatc
agaagtgccaagggaatacggactcttttatttgctctgatgatgtcacttcctgccttg
ttcaacatcggactactgctcttccttgtcatgttcatctactccatcttcggcatgtcc
agcttcgcctatgtcaagaagtcggacggcattgacgacatgttcaactttgagacgttc
ggcaacagcatgctgtgtttgtttcagatcaccacgtcggcgggctgggacggtcttctg
gcgccgatgctcaacacccaaccccccgactgcgacccgaagaaaaccttcagtgacggc
acagttgtgggcgactgcggaaaccctatggtcggcatttccttcttcgtcagctacatc
attatatgttttctggtcgtagtgaacatgtacatcgccgtgattttggagaactttagc
gtggctaccgaggagagtgcagatcctttaagcgaagacgactttgatcgcttttatgag
gtttgggagaaattcgatcctaaagcaacccagtttgtggagtacaacaagttgtccgat
tttgcggatgcgctggaccccccattgcgtattcccaaacccaacagattacggctgatg
tgcatggatttaccaatggtgaacggagaaagaatccactgtctggatattttgttcgca
ttcaccaaacgtgttctcggtgaagggggcgaaatggatatccttcgtggacaaatggaa
gaacgcttcatggcctccaacccctccaaggtgtcgtacgaacccatcaccaccaccctc
cgcagaaagcatgaggatacgtcagccgctgtgatccagagagccttcaggaagcacaag
gtgaggcttggcatacggaagatgggtaatatgcacatagagacaaaaaaacaaaatgga
aaggtcccaagaaatgagtctaaggacaatgagaattgtaacgataacactgaaaattca
gacctgacgccttccacgtcatctcccccatcatacgaaagcgcaacgccggagaacaaa
aacaaatacaagaaagacaaacgcgaaaaggaagtcaagggtaaggataacggcaagact
gattga
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