Triplophysa dalaica: 130435986
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Entry
130435986 CDS
T09616
Symbol
cngb1a
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-3
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
130435986 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130435986 (cngb1a)
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130435986 (cngb1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
130435986
NCBI-ProteinID:
XP_056622858
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Position
14:complement(15786653..15810733)
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AA seq
1299 aa
AA seq
DB search
MFSWVVKVVPQPPEPPGKLGEEGNPTLTDTGKKEEAKQGNTKPKEEVSEENSSQSGVLSW
ISHGFNTALPQPVNTSKPVNDEAKQEENAESNSKTGMIGWIVHGLGKVVPQPDEKYKGHT
EPEVTTETATVPAVKVDPPVNCFKXVRAESIPLPHIPVVEIVSDEEPDAVNRPFSPKVID
WIKQGFEKVVPQSPINLGPPSSSETPFLKAASAPVTPYKQASTPAPTPAPTPAPVPASVP
APAPVAASAPTPALAPATYEPPNVVEESKGGMVGWIVQGFGRMVPQPVLKPKEESSDVTQ
NVCILQDPCDMVLEEVDSDWENQQKEQGSGRDIQCEEKVLPNILPQVLAMQQQENAETQT
ERWTPLMESIKKEAEEAAIANIEERLQQERMEAARMAESLARQAAELAIRQLEEEHPIQI
ITELKDEEQDSEDQLPNIQEEEIEEDLELQPLHEESEEENEDSKITDVDIKRCMVDVCPA
EPSPHESEASDQMTHSPIAPPQTSKTDTASQPVTTQPETATSSPPAHVQQEEETVEEGCG
ECIHVNPELMVEDVEEGEITIPKIIVAEETDSMTLNVPVHNLTPHSKSLDSEIPQEDVDE
PKGLLGIDKGLERPVSAASQRSIVVNERLQELVKLFKERTDRAKEKLTDPDESDQESPSV
SPAKKPGDAPPPPPPPSGDIKDEAAGEEEEEEQVYEFMGHTFKVPQLKMPQIPDWLRSIL
EFRFPSSIDPYTDLIYVVWLFFVTIAWNWNVWLIPVRWVFPYQTPDNIYWWLLMDYLCDT
IYILDILVFQPRLQFVRGGDVVCDPKDMREHYMQTERFKMDVISLFPLDLLYFFTGVKSV
LRFPRLLKYHAFFEFNDRLEAVMSKAYIYRVIRTSAYLLYSLHINACIFYWGSDYEGLGS
TKWVYNGKGNAYIRCYYFAVKTLITIGGLPDPTTVFEIVFQLVNYFVGVFAFSIMIGQMR
DVVGAATAGEAYYRHCVDSTVKYMSSYKIPREVQNRVKTWYDYTWKSQGMLDEQELLVQL
PDKMRLDIAADVNYAIVSKVALFQGCDRQMIFDMLNRLKSVVYLPGDSVCKKGEIGREMY
IIKAGEVQVVGGPDGTIVFVTLKAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKK
DLAEILVHYPESEKLLRKKAKKMLTKDKKPDEKVKDTGEVIPPRPETPKLFKAALKVATG
QTFTKLKETYKGATLEPSTSTSCGTSTGPFPPPSPIHRRSPIPRPRVPDEDDMVSETTDS
TVIIRMTPRVEGEETLSVEVSPAEVVQVDMEEPPKTEKK
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgggtggtgaaagttgttccccagcccccagaacctcctgggaagctggga
gaagagggaaatcccactttaacagacacagggaaaaaagaggaagcaaaacaaggtaac
accaagccaaaggaggaggtctcagaggagaacagttctcagagtggggttttgagttgg
atttctcacggttttaacactgctctccctcagccagtaaacacttctaaaccggtcaac
gatgaagctaagcaagaggaaaatgcagagagcaacagcaagactgggatgatcggatgg
attgtgcatggattgggaaaagtggttccacagccagatgagaaatacaagggccacaca
gagccagaggtgaccactgagactgcaactgttccagcagttaaagtggatcctcctgta
aattgctttaaataggtacgagctgaatctattcctcttcctcatattcctgtggtggaa
atcgtttctgatgaagagccagatgcagttaacagacccttctctccaaaagtcatagat
tggatcaaacaaggttttgagaaggtggttcctcagtctccaattaatctaggtcctcct
tcaagttcagaaactccattcctgaaggctgcttctgctcctgtgacaccctacaaacaa
gcatcgacacctgcaccaacacctgcacccacacctgcacctgttccagcatctgtacct
gcacccgcacctgttgcagcatctgcgcccacacctgctcttgcacctgcaacttatgaa
cccccaaatgtagttgaggaatcgaaagggggaatggtcggctggattgtgcagggcttc
gggcgtatggtgccacaacccgtactgaaaccaaaagaggagagctctgatgttactcaa
aatgtgtgcatcctgcaggatccatgtgatatggtgctggaggaggtggactcagactgg
gagaaccagcagaaggaacaaggctctggacgggacatccagtgtgaggagaaggtgctg
cccaacatcctgccacaggtgctggccatgcaacagcaggagaatgcagagacccagaca
gagcgctggacacctcttatggagagcatcaagaaagaagcggaggaggctgccatagca
aacatagaggagagactacagcaggaacgcatggaggcagctcgtatggcagagagtttg
gcccgacaggctgcagagttggccatcagacagttggaggaagagcatcccatacagatc
ataacagagctcaaagatgaagaacaggacagtgaggatcaactgccaaatatccaggag
gaagaaattgaagaagacctagagttacagccgctccatgaagagagtgaggaagagaat
gaggatagtaagatcacagatgtcgacataaagaggtgcatggtggacgtctgcccggca
gagccatccccacatgaatctgaggcttcagatcagatgacccacagtcccatagcacca
ccccaaacgtcaaaaacagatacagcgtctcaacccgtcaccacccaacctgagacagcc
acatcctcacctcctgctcatgttcaacaggaagaggaaactgttgaagaaggctgtgga
gaatgcatccacgtgaatccagaactgatggtggaggatgtggaggagggagagatcaca
attcccaaaattattgtggccgaagagacagattcaatgaccctcaacgttccagtacat
aacctgacccctcacagcaaatctttggattcagagattccccaggaggatgtggatgaa
ccaaaaggtctactcggtatagacaaaggccttgagcgccctgtgtctgcagccagtcag
agaagtatagttgtgaacgagcgtctacaggagctggtcaagctatttaaggagcgaaca
gaccgtgcgaaagagaaactgaccgacccagatgagtctgatcaagagagcccatcagta
tctccagccaagaagcccggtgacgccccaccaccaccacccccaccttctggggatatt
aaagatgaagctgctggagaggaggaagaagaggaacaagtctatgagtttatgggtcac
acatttaaagttccccagttaaaaatgcctcagattcctgactggctcagaagcatactg
gagtttcgcttcccatccagcattgacccctacacagatctgatctatgtggtgtggctc
ttcttcgtgacgatcgcgtggaactggaatgtttggctcatcccggtgcgctgggttttc
ccgtaccagacccctgacaacatatactggtggctcctgatggactacctctgtgacacc
atttacattctggacatccttgtgtttcagcccagactgcaatttgtgagaggaggggat
gtcgtgtgtgacccaaaggacatgagagagcactacatgcaaacagaacgatttaagatg
gatgtgatcagtctctttcctctggatctcctgtacttcttcacaggtgtcaaatcagtg
ttgcggtttcctcgtcttttaaagtaccatgcattctttgagttcaatgatcgactggaa
gctgtgatgagcaaagcttacatttatagggtaatacggacaagcgcttaccttctttac
tctctgcacattaatgcctgtattttctactggggctctgattatgaaggtcttggctca
accaaatgggtttataatggaaaaggaaatgcttatatacgctgttactactttgccgtg
aagactctgatcaccatcggaggtttgcctgatcccacaactgtctttgaaatcgttttc
cagcttgtcaactactttgtgggagtcttcgctttctccattatgattggtcagatgaga
gatgttgttggagctgccacagctggtgaggcgtactacagacactgtgtggacagcact
gtgaaatacatgagctcctacaagatcccacgggaggtgcaaaaccgagtcaagacctgg
tacgactacacctggaagtcgcaaggcatgctggatgagcaagagctgctcgtacagctt
cctgataagatgcgtctagacatcgctgcagatgtcaactatgccatcgtcagtaaagtc
gcactctttcagggatgtgacagacagatgatatttgacatgctaaacagactcaagtct
gtggtgtatcttccaggagactctgtttgtaaaaagggcgagatcggccgggagatgtac
atcatcaaagccggagaggtgcaggtggtgggagggcctgatgggacgattgtgtttgtg
actttgaaagctggttctgtgtttggggaaatcagtttgcttgcaggtggtggtggaaac
agacgaacagctaacgtgaaagcccacggttttgctaacctcttcatcctggataagaaa
gacctcgccgagatcttagtgcactaccccgagtccgagaagcttctgcgaaagaaggcc
aagaagatgttgaccaaggacaagaagccagatgagaaggttaaggatacgggtgaggtt
atccctccacgtccagagacgcccaaactctttaaagctgcattaaaagtagccaccgga
cagactttcaccaagctgaaggagacttataaaggagcaacgctggagccatccacttct
acttcctgtggcacctctacgggtccatttcctcctccctctcccatccaccggcgttca
ccgattccccgccctcgtgtgccagatgaagacgacatggtgtcagagaccaccgacagc
accgtgatcatccgcatgactccacgggttgagggagaggagacactctctgtggaagtt
agcccagcagaggtagtccaagtggacatggaagaaccacccaaaactgaaaagaaatga
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