Terrabacter sp. C0L_2: U5C87_14615
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Entry
U5C87_14615 CDS
T09725
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
ted
Terrabacter sp. C0L_2
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ted03051
]
U5C87_14615 (pafA)
Enzymes [BR:
ted01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
U5C87_14615 (pafA)
Proteasome [BR:
ted03051
]
Prokaryotic proteasome
Bacterial regulatory particles
U5C87_14615 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
WVM95231
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All DBs
Position
3204862..3206253
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AA seq
463 aa
AA seq
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MERRIFGIENEYGVTCTTQGQRRLTPDEVARYLFRRVVAWGRSSNVFLGNGARLYLDVGS
HPEYATAECDSVRELVIQDKAGERILEGLVEDAQGRLRDDGVEGEIFVFKNNTDSAGNSY
GCHENYLYGRGGDFQRVSDMFIPFLISRQIVCGAGKVVATAHGASFAVSQRADHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTNLLKVGSADLVLRMIEAGVVM
RDLSMENPIRAIRTMSHDTTGRATVRLANGRELSALDMQREYLDKAVEFVDREGMDSPDT
KQVIDLWGRALDAIGSGDLGAIDTEIDWVIKYRLIERYRAKHGLALTDARVQQIDLAYHD
INRRRGLFYLLQRHGRTARVASDVEIFQAKVRPPQTTRAKLRGDFIRAAQAHGRDFTVDW
VHLKLNDQAQRTVLCKDPFRAVDERVERLMETIDRSPTVQRPL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcggatcttcgggatcgagaacgagtacggcgtcacctgcaccacgcagggc
cagcggcgcctgaccccggacgaggtcgcgcgctacctcttccgccgggtcgtggcgtgg
ggccgctcgagcaacgtcttcctcggcaacggtgcgcgcctctacctcgacgtcggctcc
cacccggagtacgccacggccgagtgcgactccgtgcgcgagctcgtgatccaggacaag
gcgggggagcggatcctcgagggcctcgtcgaggacgcccagggccggctgcgcgacgac
ggcgtcgagggcgagatcttcgtcttcaagaacaacaccgactcggcgggcaactcctac
gggtgccacgagaactacctctacggccgcggcggtgacttccagcgggtctccgacatg
ttcatcccgttcctcatcagccggcagatcgtctgcggagcgggcaaggtcgtggcgacc
gcccacggcgcgagcttcgccgtcagccagcgcgcggaccacatctgggagggcgtgtcc
tcggcgaccacccgcagccgccccatcatcaacacccgcgacgagccccacgccgacgcc
gagaagtaccgccgcctgcacgtcatcgtcggcgactcgaacatgtccgagacgaccaac
ctgctcaaggtgggcagtgcggacctcgtgctgcggatgatcgaggcgggggtcgtcatg
cgcgacctgtcgatggagaaccccatccgggccatccgcaccatgagccacgacacgacc
ggtcgggccacggtccggctcgccaacggccgcgagctctcggcgctcgacatgcagcgc
gagtacctcgacaaggctgtcgagttcgtcgaccgcgaggggatggacagccccgacacc
aagcaggtcatcgacctctgggggcgggcgctcgacgccatcggctccggtgacctcggc
gccatcgacaccgagatcgactgggtcatcaagtaccgcctcatcgagcgctaccgcgcc
aagcacgggctggcactgaccgacgcccgggtccagcagatcgacctcgcctaccacgac
atcaaccggcggcgcgggctcttctacctgctccagcggcacggtcgcacggcgcgcgtc
gcctccgacgtggagatcttccaggccaaggtgcgaccgccgcagacgacgcgggccaag
ctgcgcggcgacttcatccgcgccgcccaggcccacggacgtgatttcaccgtggactgg
gtgcacctcaagctcaacgaccaggcccagcgcacggtgctgtgcaaggacccgttccgt
gccgtggacgagcgggtcgagcggctcatggagacgatcgaccgctcgccgacggtccag
cggccactctga
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