Nostocoides sp. HKS02: GKE56_03875
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Entry
GKE56_03875 CDS
T06295
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
teh
Nostocoides sp. HKS02
Pathway
teh03030
DNA replication
teh03410
Base excision repair
teh03420
Nucleotide excision repair
teh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
teh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GKE56_03875 (polA)
03410 Base excision repair
GKE56_03875 (polA)
03420 Nucleotide excision repair
GKE56_03875 (polA)
03440 Homologous recombination
GKE56_03875 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
teh03032
]
GKE56_03875 (polA)
03400 DNA repair and recombination proteins [BR:
teh03400
]
GKE56_03875 (polA)
Enzymes [BR:
teh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GKE56_03875 (polA)
DNA replication proteins [BR:
teh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GKE56_03875 (polA)
DNA repair and recombination proteins [BR:
teh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GKE56_03875 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKE56_03875 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
PDDEXK_5
HHH_5
HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QGN57161
UniProt:
A0A6I5X4U2
LinkDB
All DBs
Position
824920..827592
Genome browser
AA seq
890 aa
AA seq
DB search
MSRLLLLDGHSLAYRAFFALPAENFSTSTGQHTNAVYGFTSMLINVLRDEQPTHVAVAFD
ISRQTFRTEVYADYKAGRSATPTEFQGQISLLHEVLDALKIRYVEVDGYEADDVIATLTT
AALAEDMEVLICSGDRDAFQLVTDTSTVLYPVKGVSELARMTPAAVEAKYGVLPERYSDL
AALVGETSDNLPGVPGVGPKTAAKWLGVYGDLTGLVAHVDEIKGKAGESLREHLDGVLRN
RRLNQLVRDLDVPVTIADLERQNWDRELVHAVFDSLEFRVLRDRLFEYLQAPQEEADHGF
DLEGALLAPDEVPGWLEEYAAPGVRVGVHVVGRWGRGTGDVTALALATEGDAAAYVDVAE
LDAAGDTAVAAWLGDATRPKVLHDAKGPMLALAARGWNLAGLATDTALAAYLVRPDQRSY
DLADLVLRHLGRELRAEQEQSGQGLLTFGDEGDAGAQDAMVRARAVLDLAGSLAEQLEAT
GGTALQQDLELPLERVLADMERTGIGADVEVMTELEADFAAAVRDAQEDAYDALGGDQIN
LGSPKQLQVVLFETLGLPKTRRTKTGYTTDADALNDLYTKTEHPFLEALLRHRDAARLRV
TVEGLLKSVSDDGRIHTTYQQTIAATGRLSSTDPNLQNIPIRTDAGRRIREVFIVGDGFE
SLMSADYSQIEMRIMAHLSGDDGLIEAFRSGEDLHRFVGSRVFSVEPTDVTSAMRSKVKA
MSYGLAYGLSAFGLSKQLTISTGEAQGLMDEYFARFGGVKDYLDSVVAEARGTGYTQTML
GRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKIAMLRVDAALRESGAKSRQLLQ
VHDELVLEIAPGERDDVEALVRHEMGSAVEMDAPLDVSVGVGRSWHDAAH
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgacttctgctgctggacggtcattccctcgcctaccgcgccttcttcgcgctg
ccggcggagaacttctcgacgagcaccgggcagcacaccaacgccgtctacgggttcacc
tcgatgctcatcaacgtcctgcgtgacgagcagccgacccatgtcgccgtggcgttcgac
atctcacgccagacgttccgcaccgaggtctacgccgactacaaggctggccgctcggcg
accccgaccgagttccagggccagatctcgctgctccacgaggtcctggacgccctcaag
atccgctacgtcgaggtcgacggctacgaggccgacgacgtcatcgcgacgctgaccacg
gctgccctcgccgaggacatggaggtcctcatctgctcgggtgaccgcgacgccttccag
ctcgtcaccgacaccagcaccgtgctgtaccccgtcaagggcgtctccgagctcgcccgc
atgacccctgcggccgtggaggccaagtacggcgtgctgcccgagcggtactccgacctg
gccgcgctcgtcggcgagacctccgacaacctgccgggcgtgcccggggtggggcccaag
accgcggccaagtggctgggcgtctacggcgacctcaccgggctggtcgcccacgtcgac
gagatcaagggcaaggccggcgagtcgctgcgcgagcacctcgacggcgtcctgcgcaac
cgccggctcaaccagctcgtccgcgacctcgacgtgccggtgaccatcgccgacctcgaa
cgccagaactgggaccgcgagctcgtccacgcggtcttcgacagcctcgagttccgggtg
ctgcgcgaccggctcttcgagtacctccaggccccccaggaggaggccgaccacggtttc
gacctcgagggcgcgctgctcgcgcccgacgaggtgcccggctggctcgaggagtatgcc
gcgcccggggtccgcgtcggcgtgcacgtggtggggcgctgggggcgtggcaccggtgac
gtcaccgcactggccctcgccaccgaaggtgacgcggcggcatacgtcgacgtggccgag
ctcgacgcggccggggacacggcggttgccgcctggctgggcgacgcgacccggccgaag
gtgctccacgacgccaagggcccgatgttggcgctcgctgcccgcgggtggaacctggct
gggctcgcgaccgacaccgcgttggcggcgtacctcgtgcgtcccgaccagcgctcctac
gacctcgccgacctggtcctgcgccacctcggccgcgagctgcgcgccgagcaggagcag
agcggccagggcctgctgaccttcggcgacgagggcgatgccggcgcccaggacgccatg
gtgcgggcccgggcggtgctcgacctcgcaggatccctcgccgagcagctcgaagcgacc
ggtggcaccgcgctgcagcaggacctcgagctgccgttggagcgcgtgctcgcggacatg
gagcgcaccggcatcggcgccgatgtcgaggtgatgaccgagctggaggcggacttcgcg
gcggccgtccgcgacgcccaggaggacgcctacgacgcgctcgggggcgaccagatcaac
ctcggctcgcccaagcagctccaggtcgtcctcttcgagaccctcggcctgccgaagacg
cgccgcaccaagacgggctacaccaccgacgccgacgcgctcaacgacctctacaccaag
accgagcacccgttcctcgaggcattgctccgacaccgcgacgccgcgcggctgcgggtc
accgtcgagggcctgctcaagtcggtctccgacgacgggcgcatccacacgacctaccag
cagacgatcgcggcgaccgggcggctgtcgtcgaccgatcccaacctccagaacatcccg
atccgcaccgacgcgggccgccgcatccgcgaggtgttcatcgtcggtgatgggttcgag
tcgctgatgtctgccgactacagccagatcgagatgcggatcatggcccacctctcgggc
gacgacggtctcatcgaggcgttccgctcgggcgaggacctccaccggttcgtcgggtcc
cgggtgttctccgtcgagcccacggacgtcacgtcggcgatgcggtccaaggtcaaggcg
atgtcctacggcctcgcctatgggctgtccgctttcgggttgtccaagcagctgacgatc
tcgacgggtgaggcccagggtctgatggacgagtacttcgcgaggttcggcggggtcaag
gactacctcgactccgtggtcgccgaggcgcgtggcaccggctacacccagaccatgctg
gggcgccggcgctacctgcccgacctgacctcggacaaccgccagcgccgcgagatggcc
gagcggatggcgctcaacgcaccgatccaagggtcggccgccgacatcatcaagatcgcg
atgctgcgcgtcgacgccgccctgcgcgagtcgggcgcgaagtcgcgccagctgctgcag
gtgcacgacgagctggtcctcgagatcgcgccgggggagcgcgacgacgtcgaggcgctg
gtccgccacgagatgggcagcgccgtcgagatggacgcgccgctcgacgtgagcgtcggc
gtaggccgttcatggcacgacgccgctcactga
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