Thermosynechococcus vestitus: tlr0105
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Entry
tlr0105 CDS
T00090
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tel
Thermosynechococcus vestitus
Pathway
tel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
tlr0105 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tel03021
]
tlr0105 (rpoA)
03400 DNA repair and recombination proteins [BR:
tel03400
]
tlr0105 (rpoA)
Enzymes [BR:
tel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
tlr0105 (rpoA)
Transcription machinery [BR:
tel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
tlr0105 (rpoA)
DNA repair and recombination proteins [BR:
tel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
tlr0105 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
RNA_pol_L_2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAC07658
UniProt:
Q8DML0
LinkDB
All DBs
Position
85066..86031
Genome browser
AA seq
321 aa
AA seq
DB search
MAYQIECLETRVEEDQGQYGQFALHPLAPGQGITVGNALRRVLLSNLPGSAVTAVRIAGV
NHEFSTIPGVREDVMDILLQMKQLVIRSHTSEPQMGRLFAQAPENEPLTVTAGMVQLGSE
VEVVNPNHYIATLMPGATLEMEFKIEKDRGYRSVERVRDDRLALDYLQLDAVFMPVRRVN
YTVDSVRSAGAEGDRQLQDYLKLEIWTNGSLTPQDALNQAATILVDLFSPLKEVPLHTSE
ATATDDHDETGQIPIEQLNLSVRAYNCLKRAQVNTVADLLEYSQEELLEIKNFGQKSAEE
VIEALQKHLGITLPPQKAARN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcaaattgaatgcttggaaacacgggttgaggaggatcaggggcagtacggc
caatttgccctgcatccccttgctcccggtcaagggattacggtggggaatgccctgcgg
cgggttctcctttccaacttgcccggtagtgctgtgacagcggtgcgaatcgcgggcgtc
aatcatgagttttcgacgattcctggtgtgcgcgaagatgtcatggacattttgctgcaa
atgaagcagttggtgattcgcagccacacctcagaaccccaaatgggtcgtctttttgct
caagcccctgagaatgagccattgacggttaccgcgggtatggtgcaacttggctctgaa
gtggaggtggtcaaccccaaccactatattgccacgctgatgccaggggcaaccttggag
atggaatttaagattgaaaaggatcgtggctatcgctcggtggagcgggtgcgcgacgat
cgccttgctttggactatctccaattggatgctgtctttatgcctgtgcggcgggtgaac
tacaccgttgattctgtgcgcagtgccggtgctgagggcgatcgccagctccaagactac
ctgaagctggaaatctggacaaatggcagcttgacccctcaagatgccctcaatcaggcg
gcaaccatccttgtcgatctctttagccccctgaaggaagtgcccctacacacctctgag
gccaccgccaccgacgaccatgacgaaacggggcagattcccattgagcaactgaatttg
tcagtgcgtgcctacaactgcctcaagcgtgcccaagtgaatacggtggccgatcttctt
gagtactcccaagaagagctactggagatcaaaaacttcggtcaaaagtcggctgaggaa
gtgatcgaagcactgcaaaaacacttgggaattacgctaccgccccaaaaagctgcccgt
aactag
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