Tauraco erythrolophus (red-crested turaco): 104373459
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Entry
104373459 CDS
T08611
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo04510
Focal adhesion
teo04512
ECM-receptor interaction
teo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104373459
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104373459
09142 Cell motility
04820 Cytoskeleton in muscle cells
104373459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
teo00535
]
104373459
Proteoglycans [BR:
teo00535
]
Extracellular matrix (ECM) proteoglycans
Others
104373459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104373459
NCBI-ProteinID:
XP_009977661
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
GPSLPGPPGLPGQVGLPGEIGALGPKGDPGPDGPRGPPGPPGKPGPPGHIQGVEGSADFL
CPTSCPPGPKGPQGLQGLKXEGALGLPGDEQEPSPPGPKGDVGVSGEQGVPGPPGPQGLR
GYPGMAGPKGETGPAGYKGMVGTVGAAGRPGREGPKGPPGDPGEKGDLGGRGIRGPQGDI
GPKGENGLPGIDGKDGTPGIPGVKGGVGQAGRPGVPGHRGQAGLPGQPGSKGGPGDKGEA
GARGHAGVTGAPGQLGDRGERGLVGPPGEQGKAGPKGEQGPPGIPGPQGLPGVKGDKGAP
GKTGPKGSTGDPGVHGLAGLKGEKGESGEPGPKGQQGTQGELGFPGPSGDAGAPGVRGYP
GPPGPRGLVGERGVPGMPGQRGAAGRDAGDQHIIDVVLKMLQEQLAEVAVSAKRAALGGV
GAMGPPGPPGPPGPPGEQGPHGPMGPRGVPGILGAAGQIGNIGPKGKRGEKGERGEAGRG
HPGMPGPPGIPGLPGIPGHALDGKAGERGLPGTPGEAGARRRPGXXXXXEPAACLGASAY
AAARLTEPGAVKGPVY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
ggtccttctctgccaggaccacccgggcttccaggccaggttgggcttcccggagagatc
ggagcgctgggacccaagggcgaccctggacctgatggcccgcggggtcccccaggccct
ccagggaaacccggcccccccggacacatccaaggagtggaaggcagcgctgatttcttg
tgcccaacgagctgcccgccgggtcccaagggcccccagggactgcagggactgaagngt
gagggagccctggggctgccaggggatgagcaggaaccatcacctccaggccccaagggt
gatgttggcgtctccggagaacaaggtgtcccaggccctccgggaccgcagggcctgagg
ggttatcctgggatggcgggacccaagggtgagacgggtcctgctggttacaaggggatg
gtcgggaccgtcggagcggctgggcggccgggcagagaaggtcccaagggaccacctgga
gaccctggtgagaagggagatctgggcggccgtggcatcaggggcccccaaggagacatc
ggccccaaaggggagaacggtctcccgggcatcgatggcaaagacggcaccccgggtatc
ccaggcgtgaagggcggcgtgggacaggccggccgcccgggagtgccaggacaccgggga
caagctggcttgccaggccagccgggaagcaaaggtggcccaggagacaagggtgaagcg
ggtgctcggggccatgctggtgtcactggtgccccagggcagctgggcgaccggggcgag
cgtggcctcgtgggccccccgggcgagcagggcaaagcggggcccaagggcgagcagggt
ccaccgggcatcccaggaccccaaggcttgccgggagtcaaaggagacaagggcgcccca
ggaaaaaccggccccaaaggcagcactggagacccgggcgttcatggccttgcggggctg
aagggagagaagggtgaatcgggtgagcctgggccaaagggacagcaaggcacccagggc
gagctcggcttccccggcccctcgggtgacgcgggtgcacccggcgtgcgaggctacccg
ggtccccctggcccgcgaggactcgtcggcgagcgtggtgtgccggggatgcccggccag
cgcggcgcagcgggccgggacgccggggaccagcacatcattgatgtggtcctgaagatg
ctgcaagagcagctggcagaggtggcagtcagcgccaagagagctgccctgggtggggtc
ggtgccatgggacccccaggaccccctggtcccccagggccacccggtgagcagggccca
cacggacccatgggacctcgaggcgtccccggcatcctgggtgctgccgggcagattggc
aacataggacctaaagggaagcgaggcgagaagggtgagcggggagaagctggccgcggc
cacccgggcatgccaggtcccccagggatcccaggtctccctggcatccctggccacgcg
ctcgatggcaaagccggggagcggggcctgcctggcaccccgggagaggctggggcgcgg
cggcggcccggnnnnnnnnnnnnnnnngagccggccgcctgcctgggagcctcagcgtac
gccgccgcgcgcctgacggagccgggggctgtcaagggacctgtctactga
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