Tauraco erythrolophus (red-crested turaco): 104376013
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Entry
104376013 CDS
T08611
Symbol
COL6A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo04510
Focal adhesion
teo04512
ECM-receptor interaction
teo04518
Integrin signaling
teo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104376013 (COL6A2)
04518 Integrin signaling
104376013 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104376013 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104376013 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
teo04147
]
104376013 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
teo00536
]
104376013 (COL6A2)
Exosome [BR:
teo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104376013 (COL6A2)
Glycosaminoglycan binding proteins [BR:
teo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104376013 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
104376013 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
104376013
NCBI-ProteinID:
XP_009980796
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MFRQAFFSTLLCVALVPLHAQFDGDPGDVISTSCTEKRNCPINVYFIIDTSESVALQTVP
IQSLVDQIKRFIPVFIDKLENELYQNQVYITWQFGGLHYSDVVEIYSPLTSSKDIYLPRL
SAINYLGRGTFTDCAISNMTEQIQTQMASGVNFAVVITDGHVTGSPCGGMKMQAERARDM
GIKLFAVAPSENVYEQGLREIANLPHELYRNNYAITQKDTLDIDVNTIDRIIQAMKHEAY
GECYKMSCLEIVGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGVP
GLKGEKGEIGSDGRRGAAGLAGRNGTDGQKGKLGRIGPPGCKGDPGDKGPDGYPGDAGDQ
GERGDEGIKGDPGRPGRSGPPGPPGEKGSPGLPGNPGAQGPAGSKGQRGETGPPGPKGEP
GRRGDPGTKGSKGTPGAKGERGDPGSEGPRGLPGEVGSKGARGDQGLPGSRGPSGAVGEP
GTIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGELG
PKGVQGTKGEKGEPGDPGPGGEPGPRGPTGEAGPEGTPGPPGDPGLTDCDVMTYVRETCG
CCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSQTGARVGVV
QYSHEGTFEAIKLDDERIDSLSSFKEAVKRLEWIAGGTWTPSALQYAYNKLIKESRRKSA
QVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNDPQRV
QKMRLFSDLVAEEFIDKMEDVLCPDPQIVCPELPCQTELAVAQCTQRPVDVVFLLDGSER
IGEQNFYRAHHFVEEVARQLTLARSNNDNMNARIALLQYGSERDQDVVFPLTYNLTEISN
ALAQIKYLDSSSNIGSAIIHAINNIVLSPGDGQRLARRNAELSFVFITDGITGSKNLEEA
INSMKKQDVMPTVVALGSDVDMXKKSLGDRAAIFREKNYDSLSQPSFFDRFIRWIC
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgttccgacaggcctttttttccactctcctttgtgtggctctagttcctctgcatgct
cagtttgatggagatcctggagatgtcatttctacctcctgtacagaaaagaggaactgc
cccatcaatgtatatttcatcatcgacacctcagagagtgttgctctgcaaactgtgcct
atccagagcctcgtggatcaaataaagcggttcatccctgtgttcattgataaactggag
aatgagctctaccagaaccaagtctacatcacttggcagttcggtggacttcattattcg
gatgtggtggaaatttacagccctttaacgagcagcaaagacatatatctccccaggctg
tctgctattaactatcttggccggggcaccttcacggactgtgctatctccaacatgaca
gagcaaatccagacccagatggcctcgggtgtgaactttgcggtagtcatcactgacggc
catgttactggcagcccctgtggagggatgaagatgcaggccgagagggcgcgagacatg
gggatcaagctcttcgcagtggcccccagtgagaacgtctacgagcagggactgcgggag
attgccaacctgccacatgagctgtaccgcaacaactacgccatcacgcagaaagacacg
ctggacatcgatgtgaacaccattgataggataatccaagctatgaaacacgaagcctac
ggagagtgctacaagatgagctgcctggagattgtaggtccacctggtcccaagggatac
cgggggcagaagggtgcgaaggggaacatgggtgagccaggctctcctgggctgaaggga
cgacagggtgacccaggtattgaaggtccgatcggataccccggtcccaagggtgtgcca
gggctgaaaggagagaagggagagattggatctgatggaaggaggggtgccgctggtttg
gcaggcaggaacggcaccgatggacagaagggcaagctggggagaattggaccaccgggc
tgcaagggagatcctggtgacaagggccctgatggctacccaggagatgcaggagaccaa
ggtgaaagaggagatgaaggcataaagggagatcctggtcggcctggtcgcagtggacct
ccgggacctccaggagaaaaaggaagcccgggacttccaggcaaccctggagctcaaggg
cctgctggaagcaagggacaaagaggtgaaacgggacctcctggacccaaaggagagcct
ggtcgacgtggagacccagggacgaaaggcagcaaaggcactcctggggccaaaggagag
aggggagatcctggttcagaaggtcctcgtggtctgcctggtgaggttggaagcaaagga
gcaaggggagaccaaggattgccaggatctcgaggcccttcaggtgctgtgggagagcca
ggcacgataggatcacgtggggatcctggtgacttgggcccgagaggtgacgctggaccg
ccaggaccaaagggtgacagaggcagacctggctttagctaccctggacccagaggacca
cagggtgacaagggtgagaaggggcagccggggcccaagggaggaaggggtgagcttgga
ccaaaaggagtgcaagggaccaaaggagagaagggggaaccgggtgatcctggcccagga
ggagagcctggacctcgtggtccaactggtgaagcaggccctgaggggacacccggccca
ccaggagatcctggcctgactgactgcgacgtgatgacctatgtgcgagagacgtgcgga
tgctgtgactgtgaaaagcgctgtggtgccctggacatcatgttcgtcatagacagctca
gagagtattggctacaccaacttcaccctggagaaaaactttgttgtcaacgtggtcagc
cggctgggctctattgccaaggatcccaagtcacagacaggtgcccgtgttggggtggtg
cagtacagtcacgaggggaccttcgaagccatcaagcttgatgatgagcgcattgattca
ctgtcgagcttcaaggaagcagtgaagcgcctggagtggatcgctggaggcacctggaca
ccgtctgcccttcagtatgcctacaacaagctcatcaaggaaagcaggcgaaagagcgcc
caagtgtttgctgtggtgatcacagatgggcgctatgaccctcgggatgatgacaagaac
ctcggggctctttgtggtagagatgtcgtcgtcaacaccatcggcattggagacatgttt
gatcagccagaacagagtgagaccctggtctccattgcctgcaatgatcctcagcgagtc
cagaagatgaggctcttctcagacctggtggcagaggaattcattgacaagatggaggat
gtgctctgcccagatccacagattgtctgccctgagctgccctgtcagacagagcttgca
gtggcccagtgcacgcagcgccccgttgacgttgtcttcttgctcgatggctctgaaagg
attggggagcagaatttctacagagcccaccactttgtggaggaagtggcccgacagctc
acactggccaggagcaacaatgacaacatgaatgcccgcattgcgctgctgcagtatggc
agtgagagggaccaggatgtggtcttcccactgacctacaacctgacggaaatctccaac
gccctggcacagatcaagtacctggactcatcctccaacatcgggtcagccatcatacat
gccatcaacaacatagtgctcagcccaggagacgggcagcgacttgcccggcgcaatgct
gagctctcttttgtcttcatcactgacggcatcacaggaagcaagaaccttgaggaggcc
atcaactccatgaagaagcaagacgtcatgcccacagtagtggctctcgggagtgatgta
gacatgnnaaaaaaaagcctcggggaccgggcagccatcttccgggagaagaactatgac
agcctctcccagcccagtttctttgacaggttcattaggtggatatgttaa
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