Tauraco erythrolophus (red-crested turaco): 104377735
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Entry
104377735 CDS
T08611
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104377735 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teo03019
]
104377735 (CNOT1)
Messenger RNA biogenesis [BR:
teo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104377735 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104377735 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
104377735
NCBI-ProteinID:
XP_009982894
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGTQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLVRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcacattgtgaacaggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaacccaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcggat
ctacgaggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtgcaagcgtggaagagtgtcgcaacataatcatgcagttc
ggtgttcgggaagtcacggctgcccaggttgccagggttttggggatgatggctcgcact
cattcggggctgacagatggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgatgggaaagataaaagtgatggaacacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaggagctgaatcctagcctggacttcaaagtagtaacctatgaa
ttggaccatccaggatttcagattcgtgacagcaagggcctgcatattgtagtgtttggc
atccagagagggctgggcatggaagttttcccagttaatgccatatacagaccttggaag
cacgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacgtggaagagcctggatttgattgaatctctgttacgactg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgttggtattggccttattgcagatcaacacgtcctggcataccttgcgccat
gaactcatctccacactcatgccaattttccttggcaaccatcccaactctgccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaactgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgtatgactttctta
aagagaagatgtccatctatcctgggtggccttgctccagaaaaagatcaacccaaaagt
gctcagcttcctccagaaactttggcaactatgttggcatgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagctaactgcagtaatgtc
atgaacaaggccaggcagccccccccgggagtcatgccaaaaggacgcccacccagtgcc
agcagcttggacgccatctctcctgtgcagatcgactcgcttgctggaatggcgtctctt
agtttaggaggctcagctgctcctcatacccagagcatgcaaggcttccctccaaacttg
ggctctgccttcagtactcctcagtcaccagcaaaagcgttcccccctctttccacgcaa
aaccagacaacgggtttcagtggcatcggaggactctcttcacagcttccagtaggtggt
cttactacgggtagcctgactggcataggaactggagccctcggccttcctgcagtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttacaaccacccacca
catccgaccatgtccgtagatgaggtcttggaaatgctgcagaggtttaaggactccaac
attaagcgggagcgagaagtgtttaactgcatgctgaggaacttgtttgaggaataccgc
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggatc
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccacatcatttacaggagtacatagaatacggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccgaccaactggagtc
agcttcaagaaagacgtgccgccttccattaatactaccaacattgatacgctgttagta
gccacagatcaaactgagagaattgtggaacctccagagaacgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagaattgaaggaa
acagtgaaagaagagttcatgccttgggtgtcacagtatcttgtgatgaagagagtcagt
attgagcctaattttcacagcttatattcaaacttccttgacacacttaagaatccagag
tttaataaaatggttctgaatgaaacctacagaaatatcaaggtgctactgacatcagat
aaagctgcagccaacttctcggaccgttccttgttaaagaaccttggtcactggctggga
atgattacgctggctaaaaataagcccatcttgcacacggatttggatgtgaagtcacta
ctactggaagcatacgttaagggccagcaggagttgctttatgtcgtgccatttgttgcc
aaagtcttagaatccagcgtcaggagtgtggtcttcaggcctccaaacccctggacgatg
gccattatgaatgttttagctgagctacatcaagaacatgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaatcttgcactagacatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgtttgaaaaatctggatgagcagctatctgctccaaag
aaggatgtgaagcagccagaagagctaccacccatcacgacaactactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagccccagtacagttaccac
gacatcaatgtctattctttaggagggttggctccacatattaccttaaatccaacgatt
ccgctgtttcaagcccacccgcagttgaagcagtgtgtgcggcaggcgatagagcgagcg
gtgcaagagcttgtgcatccggtggtggatcggtccattaagattgccatgactacctgt
gagcagatagtcaggaaggacttcgcgctggattcggaggagtcacgaatgcgtgtggcc
gcacaccatatgatgcggaatctgactgctgggatggccatgattacctgcagggagcct
ttgctgatgagtatagccaccaacttgaaaaatagttttgctactgcactgagggcagcc
tccccacaacagagagacatgatggagcaggcagcggcccagttggcgcaggataactgt
gagctggcatgctgctttatccagaagacggctgtggaaaaggcaggccctgagatggac
aagaggctcgcaactgaatttgagctcagaaaacatgctaggcaagagggacgtcggtac
tgtgatcctgttgtgttaacttaccaggctgagcggatgccggagcagatcaggttaaag
gttggaggtgtggacccaaaacagctggctgtttacgaagagtttgcacgcaatgtccct
ggcttcttgcctaccaatgacttaactcagcccacgggatttttggctcagcctatgaag
caagcttgggctacagatgatgtagcacaaatctatgacaaatgtatgacagaactggag
cagcacctgcagtccattccacacaccttggccatgaatcctcaagctcaagcgttgcgc
agcctcttggaggctgtggtagtagctcgtaactcccgggatgctattgctgcacttgga
ctactgcagaaggctgtggagggcttgctggatgccaccagcggggcagatgctgacctc
ctgcttcgctatcgtgagtgtcatctgcttgtgctgaaggctctgcaggacggccgtgca
tatggatctccgtggtgtaataaacaaattactaggtgcctgattgaatgcagagatgag
tacaagtacaacgtggaagctgtggagctgctagtccgcaatcacctggtgaacatgcag
cagtatgaccttcacttggctcagtcaatggagaatggtttgaactacatggctgtggcc
tttgccatgcagttggtaaagatcctgttggtggatgagagaagcgttgcccatgtaaca
gaggcagatctgtttcacaccattgagacactcatgaggattaatgctcattccagagga
aacgccccggaaggattaccccagctgatggaagtggtccgatccaactacgaagcaatg
attgaccgtgctcacggaggtcccaatttcatgatgcattccggaatttcccaagcctct
gagtacgatgatccgccaggtctgagggagaaggcggaatacctgctgagggagtgggtg
aacctctaccattcagctgcagcaggccgtgacagtaccaaagcattctctgcgtttgtt
ggacagatgcaccagcaaggaatcctgaaaacagacgacctgatcacccgctttttccgt
ctttgcactgaaatgtgtgttgagatcagctaccgtgctcaggctgagcaacagcataat
cctgctgccaaccccaccatgattcgagccaagtgctaccacaatctggatgccttcgtg
cgacttattgcactgctggtgaagcactctggggaggcaaccaacacagttacaaagatc
aacctcctgaataaggttcttggtattgtggtgggagttcttctgcaagaccacgatgtt
cggcagagtgagtttcagcaacttccttaccatcgcattttcatcatgttgctgttggaa
ttaaatgctcctgagcatgtgctggagaccatcaacttccagacgctcacagctttctgt
aacacatttcacatcctgaggcctacaaaagctccaggttttgtttatgcctggctggaa
ctgatctcccatcggatatttattgcaagaatgctggcacatacaccacagcagaagggt
tggcctatgtatgcccagttactgatcgatctcttcaagtacttggctccgttccttaga
aacgtggaactcaccaaacctatgcaaattctttataagggcactctgcgtgtgttgctg
gtcttgttgcatgacttcccagaattcctttgtgactaccactatgggttctgtgacgtg
atcccacctaactgtattcagctaaggaatctgatcctgagtgccttcccacggaatatg
aggcttccagaccctttcacccctaatttaaaggtggacatgttaagtgagattaacatt
gctccgcgaatactcaccaatttcactggagtgatgccacctcagttcaagaaagacttg
gattcctatctcaaaacccgttctccggtcacctttttgtctgacttgcgcagcaaccta
caagtatcaaatgaacctggcaaccgctacaacatccagctgattaatgcactggtgctc
tacgtaggtactcaagctattgcgcacattcacaacaaaggcagcacaccctccatgagc
accattacccactcagctcacatggacatcttccagaatttggcagttgacctggacact
gaaggccggtaccttttcttgaacgcaattgccaaccagctgcgatatcccaacagtcac
acccactacttcagctgcaccatgctgtacctgtttgcagaggccaacaccgaggccatc
caggagcagatcactagggttctcttggaacgactgattgtaaataggcctcatccctgg
ggtctccttattactttcatcgagctgataaaaaatccagcatttaaattctggaaccat
gagtttgttcactgcgctccagaaatcgagaagttgttccagtcagttgcacagtgctgc
atggggcagaaacaggcccagcaagtcatggaagggactggtgccagttag
DBGET
integrated database retrieval system
