Tepidanaerobacter acetatoxydans Re1: TepRe1_1296
Help
Entry
TepRe1_1296 CDS
T01495
Name
(GenBank) 2,3 cyclic-nucleotide 2-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tep
Tepidanaerobacter acetatoxydans Re1
Pathway
tep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TepRe1_1296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tep03019
]
TepRe1_1296
Messenger RNA biogenesis [BR:
tep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TepRe1_1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
AEE91442
LinkDB
All DBs
Position
1341605..1343143
Genome browser
AA seq
512 aa
AA seq
DB search
MDGVNIIAILATGLIALAVGYFIRKYIAEAKINSAEESAKKIVEDAENKAESIKREALVE
AKEEILKLKNEAEKELRERRNELQRSERRLIQKEEGIDKKIEAIEKKEEAITKKQNEISQ
IHEKVNELYSQQIAELERISSLTTEEAKEFLLNKVKDEIRHDAAIMIKEIETQAKEEAQK
RAKEIISYAIQKCAVDQVAETTVSVVALPNDEMKGRIIGREGRNIRALETLTGVDLIIDD
TPEAVILSGFDPVRRQVAKIALEKLILDGRIHPARIEEMVEKAQKEVESIIRDEGEKATF
DTGIHGLHGDLIKYLGKLYYRTSYGQNVLHHSIEVAHLAGAMAAELGVDVKLTKRAGLLH
DIGKSVDQETEGPHALLGAELAKKYGESFEVVNAIASHHNDVEPQTVEAILVQAADAVSA
ARPGARRETLEAYIKRLEKLEEIANSFSGVEKSYAIQAGREIRIMVKPEDVDDLGVLEIA
RNIAKKVEDELEYPGQIKVNVIRETRATEYAK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atcgacggtgtaaatataatagctattctagctactggattaatagctttggctgtagga
tattttattcgaaaatacattgctgaagctaaaataaattcggcagaagaatcagcaaaa
aaaattgtggaagatgctgaaaacaaagccgaatccattaaacgagaagctcttgtggaa
gcaaaggaagaaatactaaaacttaagaacgaagctgaaaaagagctgcgcgagagacga
aatgaactgcaacgttctgagagaagattgattcagaaagaagaaggaattgataaaaaa
attgaggctattgaaaaaaaagaagaagcaataactaaaaagcaaaatgaaatcagtcaa
attcatgaaaaagttaatgaattatattctcagcagattgcagaacttgagcgaatttca
tcattaactactgaggaagctaaagaattcttactaaataaagttaaggacgagatacgt
cacgatgcagctataatgattaaagaaattgaaacacaagcaaaggaagaagcacaaaaa
agggcaaaagaaattatttcatatgcaattcaaaaatgtgctgtagatcaagttgcagaa
actactgtttcagttgtagctctgcccaatgatgagatgaaaggacgtattatcggaaga
gaaggccgaaatattagagcattagaaacccttactggagtagatcttattattgatgat
accccagaagcggttattctttctggatttgatccagtaaggcgtcaagtagctaagatt
gctttggaaaaacttattttagatggaagaatccaccccgcaaggattgaagaaatggtt
gaaaaagctcagaaagaggttgagagcataattagagatgagggcgaaaaagcaacattt
gataccggcattcatggtctccacggtgatctcataaaatatcttggaaaattatattat
aggacaagttatggccaaaatgtattgcatcactctatagaggttgcacacttagccggg
gctatggcagcggaactgggagtagatgttaaacttacaaaaagggccggtttattgcat
gacataggaaaaagtgttgatcaagagacagagggtccccatgcgttattaggagctgaa
ttggcaaaaaaatatggtgaatctttcgaggtagtaaatgctatagcatctcatcataat
gatgttgaacctcagactgtagaagcaatattagttcaggcagcggatgcagtatcggct
gcaagacctggtgccagaagagaaactttggaagcatatataaaacgcttagaaaaactt
gaagaaatagctaattcattttccggcgtagaaaagtcctatgcaatacaagcaggacgt
gaaattcgaattatggtaaaacccgaggacgttgatgatctaggtgttttagaaatagct
agaaacattgctaaaaaagtagaagatgaattagaatatcccgggcagattaaagtaaat
gtcataagagaaactcgggctacagaatatgcaaaataa
DBGET
integrated database retrieval system
