Tetrahymena thermophila: TTHERM_01243450
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Entry
TTHERM_01243450 CDS
T01020
Name
(RefSeq) HhH-GPD family base excision DNA repair protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
tet
Tetrahymena thermophila
Pathway
tet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TTHERM_01243450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tet03400
]
TTHERM_01243450
Enzymes [BR:
tet01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TTHERM_01243450
DNA repair and recombination proteins [BR:
tet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TTHERM_01243450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH_2
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
7843730
NCBI-ProteinID:
XP_001025476
TGD:
TTHERM_01243450
UniProt:
Q24BS7
LinkDB
All DBs
AA seq
370 aa
AA seq
DB search
MKSLINPLTKKPITQIEFNLKNTLVNGQAFNWINKDVTYNKEFRGILGKNVVDFKVNENN
EVMYKEIPENSKIEEIINDYLQLNVDLVKLTVEWSEKDNYYAKVKEQLKGVRILRQFPFE
CMISFICSQNNNIPRITKILKSLRQNFGEEIYREKLEDGSEEIYYSFPSVASLRKATEQN
LRDLGLGYRANYIVSAVQLLEEKGGEEYLHKLRQLKDSHEKREALLEFKGIGNKVADCIS
LFSLDAKDLIPVDTHVFQIYNRVYKKNKNKDKKMTKDQYSEIENFFKDLYGDYAGWAHQA
IFAAELVSFQSEINSNENSSVKKTKSSKLQEEKEQEKEQTTEEQKIISKSKISEQTSSEK
NKRNQNKKIK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctctaataaaccccttaactaaaaagccaataacatagatagaattcaattta
aagaataccttggtcaacggccaagcatttaattggataaacaaagatgtaacttataac
aaagagtttagagggattctaggtaaaaatgtagtagattttaaagttaatgaaaataat
gaagtaatgtacaaagaaataccagaaaattcaaaaattgaggagattattaatgattac
ttgcaattaaatgtagatttagtcaagcttactgttgagtggtcagaaaaagataactat
tatgctaaagtcaaagaatagttaaaaggagttcgtatcttgagatagtttccatttgag
tgcatgattagctttatatgttcctaaaacaataatattccaagaattactaaaatttta
aaaagtttgagatagaattttggagaggaaatttatagagaaaaattagaagatggtagc
gaagaaatttattatagttttccatctgtagcatcattgaggaaagcaacagaacaaaat
ctcagagatttgggattgggttatagagctaattatattgtctcagcagtttagctactt
gaggagaaaggaggagaagaatatttgcacaaattgcgctagctgaaagattcacatgag
aaaagagaagccctgcttgaattcaaaggaataggaaataaagtagcagattgtatatct
ctctttagcttagatgcaaaagatttaatccctgtagatactcatgtttttcaaatatat
aatagagtttacaaaaaaaataaaaacaaagataaaaaaatgacaaaagatcagtattca
gaaatagaaaatttctttaaagatctatatggagattatgcaggatgggcccatcaagct
atttttgcggctgaactcgtctctttttagtcagaaattaactcaaacgaaaactcttca
gtaaaaaaaacaaaatcatcaaaattacaagaggaaaaagaataagaaaaagaataaact
acagaggagtaaaaaattatttctaaaagtaaaattagcgaataaacatcttcagagaaa
aataaaagaaattaaaacaaaaaaataaagtga
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