Tessaracoccus sp. T2.5-30: BKM78_06515
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Entry
BKM78_06515 CDS
T04747
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tez
Tessaracoccus sp. T2.5-30
Pathway
tez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKM78_06515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tez03400
]
BKM78_06515
Enzymes [BR:
tez01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BKM78_06515
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BKM78_06515
DNA repair and recombination proteins [BR:
tez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BKM78_06515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-TFIIB
Zn-ribbon_8
DUF294_C
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AQX15606
UniProt:
A0A807N450
LinkDB
All DBs
Position
complement(1390745..1391608)
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AA seq
287 aa
AA seq
DB search
MPELPEVAALVNALDAKARGRVIAEGHLVSFAALKTYRVPLTALAGLEIDGVSRHGKFID
VAAQGVHLIVHLARAGWVTWHEVAPKVPAKPGKSGLALRIVLDDGSGFSVTEAGTQKHLA
VYVVEDPAEVPGIAALGPDPMDPAFTADDLRAILARAGRAQIKGVLRDQKVLAGIGNAYS
DEILHVARLSPFKPADTLDEAAVAGLFGHLRRVLGDAIGSAAGVPIDQLKDAKRAGMRVH
GRTGQTCDVCGSTIAEVSFADSSLQYCPGCQTGGKRLADRRMSKLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcctgaggtggcggcgctcgtcaacgccctcgatgcgaaggcgcgcggc
cgggtgatcgcggagggccacctggtgtccttcgccgcgctcaagacctaccgggtgccg
ctgacggcactggccgggctggagatcgacggcgtcagccggcacggcaagttcatcgac
gtcgccgcccagggcgtgcacctcatcgtgcacctcgcccgggccggctgggtcacgtgg
cacgaggtcgcgcccaaggtcccggccaagcccggcaagtcggggctcgcgcttcggatc
gtgctcgacgacgggtcggggttcagcgtgaccgaggccggcacccagaagcacctggcg
gtctacgtggtcgaggacccggccgaggtgcccgggatcgcggcgctcggcccggacccc
atggatcccgccttcacggccgatgacctgcgcgccatcctggcgcgcgccggtcgcgcc
cagatcaagggcgtcctgcgtgatcagaaggtgctggcaggcatcggcaacgcatacagc
gacgagatcctccacgtagcccgcctgagccccttcaagccggccgacacactcgacgag
gccgcggtcgcgggcctgttcgggcaccttcggcgtgtgctgggtgacgccatcggctcg
gccgccggggtccccatcgatcagctgaaggacgccaagcgggcggggatgcgcgtccac
ggccggaccggacagacgtgtgacgtgtgcggctcgaccatcgccgaggtgtccttcgcg
gactcgtcgctgcagtactgcccgggctgccagacgggcggcaagcgcctggccgaccgc
cgcatgtccaaactgctcaagtga
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