Tachysurus fulvidraco (yellow catfish): 113634711
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Entry
113634711 CDS
T08119
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113634711 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113634711 (sfpq)
03041 Spliceosome [BR:
tfd03041
]
113634711 (sfpq)
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113634711 (sfpq)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113634711 (sfpq)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113634711 (sfpq)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_10
RRM_7
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
113634711
NCBI-ProteinID:
XP_026989641
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All DBs
Position
7:8646102..8664355
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AA seq
605 aa
AA seq
DB search
MSRDRFRNRGGFQQRGRGGIGGMRGGIGNPTFRNNPQQAFQNRGPQPGGGFKPAQANQVT
PQKPEGSNVTPKPEMKSPPPSLPQQQQPPPQQSPLQQQQPPPDAQKPPAPQPQQVQPPLV
PQPPIQSPPPKNLNPRPEPSTPQSQPRKNVNQHKTPVSGNGQKPPTSEGRGSHTADAPET
RELRASLSMLRKPGEKTYTQRCRLFIGNLPNDITEDEFRKLFQKYGEPSEIFINQGKGFG
FIRLESRALAEVAKAELDDKPMKGRPLRVRFATHSAALSVRNLSPYVSNELLEEAFSQFG
VVERAVVVVDDRGRSVGKGIVEFATKPAARKALDRCNDGVFLLTSAPRPVVIELLEQFDD
EDGLPEKLAQKNPNYQKEREQPPRFARPGTFEFEYSQRWKSLDEMEKQQRQQVEKNIREA
REKLEAEMEDAYHEHQANLLRQDLLRRQEELRRMEEMHNQEMQKRKEMQIRILFGRQEEE
RRRREEEMMRQREMEEQMRRKREESYRMGGFMDNREREMRMGSGGLGLADMPFGANNQKF
PLARMNFDGHQGLGGPVAGGMVPNEMHNERFPQGGPAGPRGMGPGSSGFGRVREEFEGPA
KKPRF
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggaccggttcaggaatcgtggaggattccagcagcgaggccgcgggggtatc
gggggaatgcggggcggaatcgggaacccaactttccgcaataatccacagcaagcgttt
cagaaccgtggccctcaacctgggggtggttttaaacccgctcaagcaaatcaagttacc
cctcaaaaaccagagggatctaatgttacaccgaagcccgagatgaagtcgcctcctcct
tctcttcctcagcagcagcagccgccgcctcaacaatcgcctctgcagcagcagcagccg
ccgcctgatgcacagaaacctccagctccacaaccgcaacaagtccaaccacctcttgtt
ccacaaccaccaattcagtcacctccaccaaaaaaccttaacccgagaccagaaccctca
actccacagagtcaaccccgaaagaacgtcaatcaacacaaaacaccagtgagtggaaat
ggacaaaagcctccaaccagtgaaggccgtggatcccatacagcggatgcccccgaaaca
cgggaattaagggcatccctgtcaatgctgcggaaacccggggagaaaacctacacccag
agatgccggctgttcatcggcaatttgcccaacgacattacagaggacgagttcagaaaa
ctgtttcagaagtatggagagcctagtgaaatcttcattaatcaaggcaaaggttttggc
ttcatacgtctggagtcacgggctttagcagaggtcgcgaaagctgaattggatgataaa
ccgatgaaaggcagaccactccgggttcggtttgctacccattcagctgcattgtctgtg
cgtaatctttccccatatgtctccaacgagctcctcgaagaggcgttctcacagttcggc
gtggtagaaagggcagtggttgttgtggatgaccgtgggcgctctgtcgggaaaggcatc
gttgagtttgctaccaagccagcagctagaaaagctcttgaccggtgcaatgatggagtc
ttcctactcacttcggcacctcgtccagttgtgattgagctgttggagcagtttgacgat
gaagatggtctgccagagaagcttgctcagaagaacccaaattatcagaaagagcgagaa
cagcccccacgttttgccagaccaggcacttttgagtttgaatactcacaacgatggaag
tctctcgatgagatggagaaacagcagaggcaacaagtggagaaaaatatccgtgaggcg
cgtgagaagctggaggcagaaatggaagatgcctaccatgagcaccaggctaacttgctg
cgacaggatcttcttaggcgtcaagaggaattgcgacgcatggaagagatgcataatcag
gagatgcaaaaacgcaaggagatgcagattagaattttgtttggcaggcaagaggaggag
cgccgcaggcgggaggaggaaatgatgcggcagagagaaatggaagaacagatgaggcgt
aagcgggaggagtcctacagaatgggtggtttcatggataatagggaaagggagatgagg
atgggttctggaggtcttggattggcagatatgccttttggtgctaacaaccagaagttt
ccattggccagaatgaactttgatggtcaccagggactcggaggaccagtggcagggggc
atggtgcccaacgaaatgcacaatgagcgtttccctcaaggtggccctgcaggtccgagg
ggcatgggtcctggcagttcaggatttggcagagtccgtgaggaattcgaaggacctgcc
aagaagccccgcttctga
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