Tachysurus fulvidraco (yellow catfish): 113640330
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Entry
113640330 CDS
T08119
Symbol
mre11a
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440
Homologous recombination
tfd03450
Non-homologous end-joining
tfd04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113640330 (mre11a)
03450 Non-homologous end-joining
113640330 (mre11a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfd03032
]
113640330 (mre11a)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113640330 (mre11a)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
113640330 (mre11a)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
113640330 (mre11a)
BRCA1-C complex
113640330 (mre11a)
NHEJ (non-homologous end-joining)
MRX complex
113640330 (mre11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
113640330
NCBI-ProteinID:
XP_026998583
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Position
22:12616772..12647839
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AA seq
700 aa
AA seq
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MTSSSANTIDDEDTFKFLIATDIHLGYLEKDAVRGNDTFVTFDEIMSCARQNDVDLVLLG
GDLFHDNKPSRKALHSCMEVMRKYCMGDKPILFEIISDQAVNFGNSRFPWVNYQDENLNI
SIPIFSIHGNHDDPTGADGLCALDVLSCAGLVNHFGHSRSVEKVEVSPILLQKGNTKIAL
YGLGSIPDERLYRMFVNNQVTMLRPREDESAWFNLFVIHQNRSKHGATNYIPEQFLDDFL
DLVIWGHEHECKISPVRNEQQLFYVTQPGSSVVTSLSPGEAVKKHIGLLRVKGRKMNLQK
IPLHTVRQFFIQDVILLDYPELFSPEIPNVSNKVQAFCQQKVEEMLEEAERERLGNPLTP
EKPLIRLRVDYSGGFESFNTMRFSQKFVDRVANPKDILHFVRHRESKDDVKGESIDFNLL
LSRPPSEVMQLRVEDLVKEYFQTAEKNMQLSLLTEQGMGKAVQEFVDKEERDAIEELINY
QLEKTQRYLREKHVEATEEKIDEEIRRFRDSKKNTAEEDEEVQEAINRARAQRDPAKGDD
FNQLDEPADVSMDSDEDDAPMPPVRGRGRGSRARGGRGQSSAPRGRARGAGSQASRGGRS
QKAALSSPVKTKSIMDAFQAPRGSRGATKSYKEVTIEDSDSEDDLSFVKTSRPAQKSSTF
SSSSRRGSQSLSQSYKGVYFDEDDDDDEFDPFKTAGRRGR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatcatctgcaaacacaatagacgacgaggacacgtttaagttcctcatcgcc
accgacatccacctcggatacctggagaaagacgccgtcagaggcaatgacacgtttgtg
acgttcgatgagatcatgagttgtgccagacagaatgatgtggacttggtgctgctgggt
ggagatcttttccatgacaacaagccttcacgtaaagctctgcacagctgtatggaggtg
atgaggaagtactgcatgggtgataaaccgatcctgtttgagatcatcagcgatcaggcc
gtcaacttcgggaacagcaggttcccctgggtgaactaccaggatgagaacctgaacatc
tccatacctatattcagcatccacgggaaccatgacgatccgaccggggctgatggtctg
tgtgctctggatgtgttgagctgcgctggtctggtgaatcattttggacacagccgctca
gtggagaaagtggaggtcagcccaatattactgcagaaaggaaacactaagatcgccctc
tacggcctcggctcgatcccagacgagaggctgtaccggatgtttgtgaataaccaggtg
actatgctccgcccccgagaggacgagagcgcctggttcaatctgttcgtcatacatcag
aacaggagtaaacatggtgccactaactacatccctgagcagtttctggatgacttcctg
gacctggtgatttggggccacgagcatgagtgtaaaatctctccagtccgaaacgagcag
cagcttttctatgtcacgcagccgggcagctcagtcgtcacctcactgtcacccggggaa
gctgtcaaaaagcacatcggcttactcagggtgaagggcaggaaaatgaacctgcagaag
attccactacacacagtgagacagttttttattcaggacgtgattcttttagattacccg
gagttgttcagcccagagattcccaacgtcagtaacaaagtgcaggctttctgccagcaa
aaggttgaagagatgttggaggaggcagaaagggagagactcggaaacccactaacaccc
gaaaaacctctcatcaggctacgagttgattacagtggaggattcgagtcttttaacaca
atgcgtttcagtcagaagtttgtggatcgagtagcgaatcctaaagacatcctacatttt
gtccgacacagagagagtaaagacgatgtgaaaggggagagtatagattttaatttgctc
ctgtctcggccgccgtctgaagttatgcagttgcgagtcgaggatcttgttaaggagtac
tttcagactgcagagaagaatatgcagctgtccctgctgacggagcagggcatgggcaaa
gccgtgcaggagtttgtggataaagaggaacgagatgccatcgaggagctcatcaactac
cagctggagaaaacgcagcgctacctcagggaaaaacacgtggaagccacagaggagaag
atcgatgaggagattcgccgctttagagactcgaagaagaacacagcagaagaggatgaa
gaagtacaagaggcgataaaccgagcgagagctcaaagagatcctgcaaagggtgatgat
ttcaaccaattagatgaaccggcagatgtttccatggattccgatgaggacgacgccccc
atgccaccagttaggggaagagggcggggctccagagcaagaggagggaggggccaaagc
agtgcaccaagaggaagagcacgaggagctgggtctcaggcaagtcgaggtgggcggagc
cagaaagctgctttatcaagtcctgttaaaaccaagtctataatggatgcatttcaagct
ccaagaggatcccgaggtgccacaaaatcctataaggaggtcactatagaggacagcgac
tccgaggacgacctgtcctttgtcaagacatctcgtcctgcacagaaatcttccactttt
tcttcttccagtaggcggggctcccaaagtctcagccaatcatataaaggagtctacttt
gatgaagacgatgatgatgatgagtttgacccgtttaagacagcaggtcgtcggggtaga
tga
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