KEGG   Tachysurus fulvidraco (yellow catfish): 113640330
Entry
113640330         CDS       T08119                                 
Symbol
mre11a
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
  KO
K10865  double-strand break repair protein MRE11
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440  Homologous recombination
tfd03450  Non-homologous end-joining
tfd04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    113640330 (mre11a)
   03450 Non-homologous end-joining
    113640330 (mre11a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tfd03032]
    113640330 (mre11a)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113640330 (mre11a)
DNA replication proteins [BR:tfd03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    113640330 (mre11a)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     113640330 (mre11a)
    BRCA1-C complex
     113640330 (mre11a)
   NHEJ (non-homologous end-joining)
    MRX complex
     113640330 (mre11a)
SSDB
Motif
Pfam: Mre11_DNA_bind Metallophos
Other DBs
NCBI-GeneID: 113640330
NCBI-ProteinID: XP_026998583
LinkDB
Position
22:12616772..12647839
AA seq 700 aa
MTSSSANTIDDEDTFKFLIATDIHLGYLEKDAVRGNDTFVTFDEIMSCARQNDVDLVLLG
GDLFHDNKPSRKALHSCMEVMRKYCMGDKPILFEIISDQAVNFGNSRFPWVNYQDENLNI
SIPIFSIHGNHDDPTGADGLCALDVLSCAGLVNHFGHSRSVEKVEVSPILLQKGNTKIAL
YGLGSIPDERLYRMFVNNQVTMLRPREDESAWFNLFVIHQNRSKHGATNYIPEQFLDDFL
DLVIWGHEHECKISPVRNEQQLFYVTQPGSSVVTSLSPGEAVKKHIGLLRVKGRKMNLQK
IPLHTVRQFFIQDVILLDYPELFSPEIPNVSNKVQAFCQQKVEEMLEEAERERLGNPLTP
EKPLIRLRVDYSGGFESFNTMRFSQKFVDRVANPKDILHFVRHRESKDDVKGESIDFNLL
LSRPPSEVMQLRVEDLVKEYFQTAEKNMQLSLLTEQGMGKAVQEFVDKEERDAIEELINY
QLEKTQRYLREKHVEATEEKIDEEIRRFRDSKKNTAEEDEEVQEAINRARAQRDPAKGDD
FNQLDEPADVSMDSDEDDAPMPPVRGRGRGSRARGGRGQSSAPRGRARGAGSQASRGGRS
QKAALSSPVKTKSIMDAFQAPRGSRGATKSYKEVTIEDSDSEDDLSFVKTSRPAQKSSTF
SSSSRRGSQSLSQSYKGVYFDEDDDDDEFDPFKTAGRRGR
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgacgtcatcatctgcaaacacaatagacgacgaggacacgtttaagttcctcatcgcc
accgacatccacctcggatacctggagaaagacgccgtcagaggcaatgacacgtttgtg
acgttcgatgagatcatgagttgtgccagacagaatgatgtggacttggtgctgctgggt
ggagatcttttccatgacaacaagccttcacgtaaagctctgcacagctgtatggaggtg
atgaggaagtactgcatgggtgataaaccgatcctgtttgagatcatcagcgatcaggcc
gtcaacttcgggaacagcaggttcccctgggtgaactaccaggatgagaacctgaacatc
tccatacctatattcagcatccacgggaaccatgacgatccgaccggggctgatggtctg
tgtgctctggatgtgttgagctgcgctggtctggtgaatcattttggacacagccgctca
gtggagaaagtggaggtcagcccaatattactgcagaaaggaaacactaagatcgccctc
tacggcctcggctcgatcccagacgagaggctgtaccggatgtttgtgaataaccaggtg
actatgctccgcccccgagaggacgagagcgcctggttcaatctgttcgtcatacatcag
aacaggagtaaacatggtgccactaactacatccctgagcagtttctggatgacttcctg
gacctggtgatttggggccacgagcatgagtgtaaaatctctccagtccgaaacgagcag
cagcttttctatgtcacgcagccgggcagctcagtcgtcacctcactgtcacccggggaa
gctgtcaaaaagcacatcggcttactcagggtgaagggcaggaaaatgaacctgcagaag
attccactacacacagtgagacagttttttattcaggacgtgattcttttagattacccg
gagttgttcagcccagagattcccaacgtcagtaacaaagtgcaggctttctgccagcaa
aaggttgaagagatgttggaggaggcagaaagggagagactcggaaacccactaacaccc
gaaaaacctctcatcaggctacgagttgattacagtggaggattcgagtcttttaacaca
atgcgtttcagtcagaagtttgtggatcgagtagcgaatcctaaagacatcctacatttt
gtccgacacagagagagtaaagacgatgtgaaaggggagagtatagattttaatttgctc
ctgtctcggccgccgtctgaagttatgcagttgcgagtcgaggatcttgttaaggagtac
tttcagactgcagagaagaatatgcagctgtccctgctgacggagcagggcatgggcaaa
gccgtgcaggagtttgtggataaagaggaacgagatgccatcgaggagctcatcaactac
cagctggagaaaacgcagcgctacctcagggaaaaacacgtggaagccacagaggagaag
atcgatgaggagattcgccgctttagagactcgaagaagaacacagcagaagaggatgaa
gaagtacaagaggcgataaaccgagcgagagctcaaagagatcctgcaaagggtgatgat
ttcaaccaattagatgaaccggcagatgtttccatggattccgatgaggacgacgccccc
atgccaccagttaggggaagagggcggggctccagagcaagaggagggaggggccaaagc
agtgcaccaagaggaagagcacgaggagctgggtctcaggcaagtcgaggtgggcggagc
cagaaagctgctttatcaagtcctgttaaaaccaagtctataatggatgcatttcaagct
ccaagaggatcccgaggtgccacaaaatcctataaggaggtcactatagaggacagcgac
tccgaggacgacctgtcctttgtcaagacatctcgtcctgcacagaaatcttccactttt
tcttcttccagtaggcggggctcccaaagtctcagccaatcatataaaggagtctacttt
gatgaagacgatgatgatgatgagtttgacccgtttaagacagcaggtcgtcggggtaga
tga

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