Tachysurus fulvidraco (yellow catfish): 113641171 Help Entry 113641171         CDS       T08119                                  Symbol pold1 Name (RefSeq) DNA polymerase delta catalytic subunit   KO K02327   DNA polymerase delta subunit 1 [EC:2.7.7.7] Organism tfd  Tachysurus fulvidraco (yellow catfish) Pathway tfd03030   DNA replication tfd03410   Base excision repair tfd03420   Nucleotide excision repair tfd03430   Mismatch repair tfd03440   Homologous recombination Brite KEGG Orthology (KO) [BR:tfd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     113641171 (pold1)    03410 Base excision repair     113641171 (pold1)    03420 Nucleotide excision repair     113641171 (pold1)    03430 Mismatch repair     113641171 (pold1)    03440 Homologous recombination     113641171 (pold1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tfd03032]     113641171 (pold1)    03400 DNA repair and recombination proteins [BR:tfd03400]     113641171 (pold1) Enzymes [BR:tfd01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      113641171 (pold1) DNA replication proteins [BR:tfd03032]  Eukaryotic type   DNA Replication Elongation Factors    DNA polymerase delta complex     113641171 (pold1) DNA repair and recombination proteins [BR:tfd03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      DNA polymerase delta complex       113641171 (pold1)    MMR (mismatch excision repair)     DNA polymerase delta complex      113641171 (pold1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol_B DNA_pol_B_exo1 zf-C4pol POL3_N REV3_N DNA_pol_B_2 DNA_pol_B_exo2 Motif Other DBs NCBI-GeneID:  113641171 NCBI-ProteinID:  XP_026999541 LinkDB All DBs Position 15:complement(17467384..17482906) Genome browser AA seq 1105 aa AA seqDB search MEFKRRNGGPSMGSASQAKRGKTGSEWEDSPSHFEEELALFDEMDMEVESGEGQAGHDVI PVGDLFSADLNPRWRRPSAAPLQPDKDTLIFQQIDLDYYLGSAVPGMPGQVQGKVPVVRM FGVTDNGNSVCCHIHGFAPYFYVPAPAGFTTSHLAEFQKELNSAVLKDMRSNKDNISVTV LAVDITRKESMYGYHGKRPLDFLRITMAMPRLIAPAKRILEQGFKFAHFSIQSYSAYEAN IDFEIRFMVDSDVVGCCWIELPTGKYKLREEKSEGERDSQAPGKVSLCQYEVDVGWTDLI SHPAEGDWQRIAPLRVLSFDIECAGRKGVFPEAEVDPVIQIASMVQRQGEKEPFIRTVFT LQNCASIVGSQILCFTQEKRLLQSWAEFVRTVDPDIITGYNIQNFDLPYLLNRAAALKVN YFPYLGRMKGIRSVLKDSSFQSKQMGRRENKTVNMEGRVQFDLLQVLLRDYKLRSYTLNA VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA RVTGVPLTYLLSRGQQIKVVSQLLRHAMKQHLVMPVVKTEGGEDYTGATVIEPEKGYYSV PIATLDFSSLYPSIMMAHNLCYTSLLQKGQAERLGLSSDDFIKTPTGDLFVKSSVRKGLL PEILENLLSARKRAKSDLKKETDPFRKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI SQSVTGFGRQMIEQTKQLVESKYTINNGFPADAKVIYGDTDSVMVKLGVNTVQEAMNIGT EAAAWVSSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSSSTQHEKMDCKGIETVRRDN CPLVANLINTCLQKILIERDPDGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTEY YLEQQLSKPLLRIFEPILGETKAESVLLKGDHTRCKTVLTSRVGGLMAFAQKRSTCIGCK AVLKNDTAVCDFCKKKESELYQKEIAHLSALEEKFSRLWTQCQRCQGSLHEDVLCTSRDC PIFYMRKKVQKDLGDQEKLVTRFGW NT seq 3318 nt NT seq  +upstreamnt  +downstreamnt atggagttcaagcggcggaatggaggaccatcgatgggaagcgcctctcaagccaaaagg ggcaaaacgggctctgagtgggaggacagcccgtcgcattttgaggaagagcttgccctg tttgacgaaatggacatggaggtggaatcgggagaagggcaggcgggtcatgatgtcatc ccagtgggtgatttgttttcagcggatctgaacccacgctggcgccgtccatctgcagca cctcttcagcctgataaagacactctcatctttcagcagattgacctggactattatttg ggctctgcagtacccgggatgccaggacaggtccagggaaaggttccggtggtccgtatg ttcggagtgacagacaatgggaacagcgtgtgctgtcacatccatggtttcgctccctac ttctatgttcctgcaccagcaggcttcactacctctcacctggcggagtttcagaaggag ctgaactctgcagtgttaaaggacatgcgctccaacaaagacaacatctctgtgaccgtg ctagcggtggacatcacacgcaaagagagtatgtacggttaccacggcaagcgaccactg gacttcctgcgcataactatggcgatgcctcggctgattgccccggccaaacggatcctg gagcagggatttaagtttgctcacttctccattcagagctattctgcatacgaggccaac atagactttgagatcaggttcatggtggacagtgatgtggttggctgctgctggattgag ttgcctacagggaagtacaagctgagagaggagaagagtgaaggagagagagactcccag gctccaggcaaggtgtctttgtgtcagtatgaggtggatgtcggatggacagatctgatc agtcacccagcagaaggggactggcaaagaatcgctcctctcagggtcctcagctttgac attgagtgtgcaggcagaaaaggtgtgttcccagaggcagaggtggacccggtgattcag atcgcctccatggtgcagcgtcagggagagaaagagccgtttatccgcactgtttttacc ttacagaactgtgctagtatagtgggctctcagatcctctgcttcacccaagagaaacgg ctattgcagagttgggcagagtttgtgaggacggtggatcctgacatcattactggctac aacatacaaaactttgacctgccgtacctgctcaaccgtgctgctgctttaaaggtgaat tatttcccctatctgggtcgtatgaaaggcatcaggtcggtccttaaggattccagcttc cagagcaaacagatgggacgcagagaaaacaaaaccgtcaacatggagggcagagtgcag tttgacctccttcaggtcttgctgagggactataagctgcgttcctacacactcaacgcc gtcagtttccacttcctgcaggagcagaaggaggatgtccagcactccatcatcacagat ctgcagaatgggaatgagcagacgaggcgccgtctagctgtctactgtctgaaagatgcc tacttgcccctgcgcttgctgcagaagttgatgtgtgtgattaactacatggagatggcc agagtgactggtgtgcctctgacctacctgttgtctcgaggccagcagattaaagtcgtg tctcagttactacgacatgccatgaagcagcacttggtgatgccggtggtaaagaccgaa ggtggggaggattatacaggagctacagtcattgaaccagagaagggatactacagcgta ccaattgccactctggatttttcttcactgtacccgtccattatgatggctcataatctg tgttacacttcactgctgcagaaaggccaagcagagagactgggtctctcttcagatgac ttcattaagactcctacaggcgatctgtttgtcaaaagctcggtgaggaaggggctcctg cccgagatcctggagaacctgctgagtgcccgtaagagggcaaagtccgatctgaagaag gagaccgacccgttcaggaagcaggttctggatggcaggcaactggctttaaagatcagc gccaactctgtgtatggtttcactggtgcacaggtgggcaaactgccctgtttggagatc tcacagagtgttacaggcttcggcagacagatgattgagcagacaaagcagcttgtggaa tccaaatacaccatcaataatggatttccagctgatgccaaggtcatctacggagacaca gactctgtgatggtgaaactgggagtgaacacagtgcaggaggcgatgaacatagggacg gaggcggctgcgtgggtgtcctcacattttgtccctccaatcaaactggagtttgagaag gtgtactatccatatttactgatcaataagaagaggtatgcaggcctgtatttttcctcc agttccacgcagcatgagaagatggactgtaaaggaatagagacagtgagacgagacaac tgccccctagtggccaacctcatcaacacatgccttcaaaaaatcctcatcgagagagat cctgatggagctgtagcccacgctaaagaggtgatctcagaccttctgtgtaaccgcatt gacatcagccagctggtgatcacaaaggagttgacgcgcactgcgcaggagtacgcaggc aaacaggcccacgtggaactggcagaaaggatgcgaaagcgagatgcaggcagcgctcct aatctgggtgatcgagttccatatgttatcatcaaggctgctaaaggagtagcagcatac atgaagtcagaggatcctatttatgtgctggagaacaacatccctattgacacagaatat tacctcgagcagcagctgtctaaacctttgctgcgcatctttgagcctatacttggtgaa accaaggctgaaagtgtattactcaagggagatcacacgcgctgtaagaccgttttgaca tccagagttggtggcctcatggcttttgcacagaaacgtagcacatgcattggctgcaaa gcagttctcaaaaatgacactgctgtgtgtgatttctgtaagaagaaggaatctgagctc tatcagaaagagattgctcacctgtctgcactggaggagaaattctctcgtctgtggact cagtgtcagcgctgccaagggtccctacatgaggatgtgctgtgtaccagtcgagactgt ccaatcttctacatgaggaaaaaggttcagaaagacctcggcgatcaggagaagctcgtc acacgtttcggctggtga

Tachysurus fulvidraco (yellow catfish): 113642481 Help Entry 113642481         CDS       T08119                                  Symbol pold4 Name (RefSeq) DNA polymerase delta subunit 4   KO K03505   DNA polymerase delta subunit 4 Organism tfd  Tachysurus fulvidraco (yellow catfish) Pathway tfd03030   DNA replication tfd03410   Base excision repair tfd03420   Nucleotide excision repair tfd03430   Mismatch repair tfd03440   Homologous recombination Brite KEGG Orthology (KO) [BR:tfd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     113642481 (pold4)    03410 Base excision repair     113642481 (pold4)    03420 Nucleotide excision repair     113642481 (pold4)    03430 Mismatch repair     113642481 (pold4)    03440 Homologous recombination     113642481 (pold4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tfd03032]     113642481 (pold4)    03400 DNA repair and recombination proteins [BR:tfd03400]     113642481 (pold4) DNA replication proteins [BR:tfd03032]  Eukaryotic type   DNA Replication Elongation Factors    DNA polymerase delta complex     113642481 (pold4) DNA repair and recombination proteins [BR:tfd03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      DNA polymerase delta complex       113642481 (pold4)    MMR (mismatch excision repair)     DNA polymerase delta complex      113642481 (pold4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol_delta_4 SirC_C Motif Other DBs NCBI-GeneID:  113642481 NCBI-ProteinID:  XP_027001820 LinkDB All DBs Position 4:complement(22513821..22516371) Genome browser AA seq 109 aa AA seqDB search MKAKRGLITDTFKVVNKVKRSDRRDKKPPPPPAADAEPPTLSEREIELKELRRFDLDWQF GPCTGISRLQRWERAAIHGLNPPQEIKDILLKESTDPEYTHSLWRDYPL NT seq 330 nt NT seq  +upstreamnt  +downstreamnt atgaaagccaaacgtggcctcatcacagatacattcaaggtagtgaataaagtgaagaga agtgacagaagggataagaaacctccacctcccccagctgcagatgcagaacctccaaca ctgagtgagagagagatcgagctgaaggagctgaggaggtttgacttggactggcagttc ggaccatgtacagggattagtcgcttgcagagatgggagagggcagctatacatggcctg aaccccccacaggagattaaagacatactgctgaaagagagtacagacccagaatacaca cacagtctctggcgtgactaccccctgtga

Tachysurus fulvidraco (yellow catfish): 113651971 Help Entry 113651971         CDS       T08119                                  Symbol pold3 Name (RefSeq) DNA polymerase delta subunit 3   KO K03504   DNA polymerase delta subunit 3 Organism tfd  Tachysurus fulvidraco (yellow catfish) Pathway tfd03030   DNA replication tfd03410   Base excision repair tfd03420   Nucleotide excision repair tfd03430   Mismatch repair tfd03440   Homologous recombination Brite KEGG Orthology (KO) [BR:tfd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     113651971 (pold3)    03410 Base excision repair     113651971 (pold3)    03420 Nucleotide excision repair     113651971 (pold3)    03430 Mismatch repair     113651971 (pold3)    03440 Homologous recombination     113651971 (pold3)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:tfd01009]     113651971 (pold3)   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tfd03032]     113651971 (pold3)    03400 DNA repair and recombination proteins [BR:tfd03400]     113651971 (pold3) Protein phosphatases and associated proteins [BR:tfd01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      113651971 (pold3) DNA replication proteins [BR:tfd03032]  Eukaryotic type   DNA Replication Elongation Factors    DNA polymerase delta complex     113651971 (pold3) DNA repair and recombination proteins [BR:tfd03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      DNA polymerase delta complex       113651971 (pold3)    MMR (mismatch excision repair)     DNA polymerase delta complex      113651971 (pold3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CDC27 Motif Other DBs NCBI-GeneID:  113651971 NCBI-ProteinID:  XP_027016760 LinkDB All DBs Position 21:complement(9567758..9576057) Genome browser AA seq 456 aa AA seqDB search MDDLYLDNIDEYVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYIEQRRKESSGNTLHATY LISGKCLENGSMCHKVSVVREDKLADVKSKLDVMSSVHVYSVQKAELKDSAPLYSTDYDA MKENLKNCNKYSAIRCAAAVQMSTAELQRAQEKTLSNATDKEATKPVVNNCTAPVSKPTS KQPKGIMGMFSSKNSTKSEEQSSEVKVEQTDEPSLAERPKTKASSKASTMNIFFGKAADK KVQKPDKNIKEKADGAPTSSAAGSTKETSPKPKQDIKVEIPKEVEVIKDDSKDSRSKTKR LQHSDSEDEQVESQMKKRRRIKKPQPDSSDDDVIPDSPPAPEPQTPSPEKHVKKEPVSQN SEVKRRKRRRVLKSNTFLDDEGCIVTEKGYESESYSESEDESKAATEPSEDSSSLKQPHT RMNEVKKVKEKGQKKASAAANKATKQASIKGFFQKK NT seq 1371 nt NT seq  +upstreamnt  +downstreamnt atggatgatctttatttagacaacattgacgaatatgttaacgatcagaataaaattgtc acctataaatggctgagtcttacccttggtgtccatgttaacacagctaaacagatgctg tatcactacatagagcagcgacgaaaggagagttctggaaatactctgcatgcaacttac ttgatctctgggaagtgcttggagaatgggagcatgtgtcataaggtgtcagtagtgcgt gaagacaaacttgcggatgtaaaatccaaactggatgtaatgagtagtgtgcatgtgtac agcgtgcagaaagctgagctgaaggacagtgcaccactttacagtactgattacgatgct atgaaagagaaccttaaaaactgcaacaagtacagtgcgattcgctgtgccgctgctgta cagatgtccacagcagagttacagagagctcaagaaaagactttgtctaatgcaactgac aaagaagccactaaacctgttgtcaacaactgcactgcacctgtttccaaacccacctcc aaacagccgaaaggcatcatgggaatgttttcaagtaaaaactctactaaaagtgaagag cagagcagtgaggtgaaggtggagcagacggatgaaccatctctggctgaaagacccaaa accaaggcatcttccaaagctagcactatgaacatttttttcgggaaagcagctgacaaa aaggttcagaaaccagacaaaaacataaaagaaaaggcagatggggctccaacatcatca gctgcaggaagcacaaaagagacttcacccaaacctaaacaggacataaaggtggagata ccgaaggaggttgaagtgattaaagatgactccaaagatagccggagtaaaacaaagcga ctgcagcattcggacagcgaagatgagcaagtggagagtcagatgaaaaagagacggagg ataaaaaagccacagcctgacagcagtgatgatgatgtaattcccgattctcctcctgca cctgaaccgcagacaccaagtcccgaaaagcacgtgaagaaggagccagtttcacaaaac tctgaagttaagaggaggaagaggagacgggtactgaagtccaacacgtttcttgatgat gaaggttgtattgtgaccgagaaaggctatgaaagtgaatcttactctgagagtgaagac gaatccaaggcagctactgaaccttctgaggattcaagctcactcaagcagccacacaca agaatgaatgaagtgaaaaaggtcaaagagaaaggacagaagaaggcttctgctgctgcg aataaagcaacgaaacaagcatctatcaaaggctttttccaaaagaaatga

Tachysurus fulvidraco (yellow catfish): 113656822 Help Entry 113656822         CDS       T08119                                  Symbol pold2 Name (RefSeq) DNA polymerase delta subunit 2   KO K02328   DNA polymerase delta subunit 2 Organism tfd  Tachysurus fulvidraco (yellow catfish) Pathway tfd03030   DNA replication tfd03410   Base excision repair tfd03420   Nucleotide excision repair tfd03430   Mismatch repair tfd03440   Homologous recombination Brite KEGG Orthology (KO) [BR:tfd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     113656822 (pold2)    03410 Base excision repair     113656822 (pold2)    03420 Nucleotide excision repair     113656822 (pold2)    03430 Mismatch repair     113656822 (pold2)    03440 Homologous recombination     113656822 (pold2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tfd03032]     113656822 (pold2)    03400 DNA repair and recombination proteins [BR:tfd03400]     113656822 (pold2) DNA replication proteins [BR:tfd03032]  Eukaryotic type   DNA Replication Elongation Factors    DNA polymerase delta complex     113656822 (pold2) DNA repair and recombination proteins [BR:tfd03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      DNA polymerase delta complex       113656822 (pold2)    MMR (mismatch excision repair)     DNA polymerase delta complex      113656822 (pold2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol_E_B DNA_pol_D_N Motif Other DBs NCBI-GeneID:  113656822 NCBI-ProteinID:  XP_027024061 LinkDB All DBs Position 14:26035927..26041672 Genome browser AA seq 468 aa AA seqDB search MFSDAVESKETLLRPPSSDGTLFERQELLSYSSCSERFRLGERSFSRQYAHIYATRLMQM REILSERAQQKWGPSLPIRKLCDLQTGERCVVVGTLFKHMELQPSILKEISEEHNLLPQP PRAKYISQSDELILEDELQRIRLEDKIETAKFVTGSVIAVLGAEKNDGKFTVEDFCLADL PPQTPREPLNTDRFVLLASGLGLGSSKAESMLGLQLLVDMVSGHLGDEGEQSAAASISRV LLAGNLLSRSTQDKDSSTKAKYLTKKTQAGSVEAIRLLDELLVQLVASVAVDVMPGEFDP TNYTLPQQPLHSCMFPLCGSYRTLQLVTNPYQAAVDGVRFLGTSGQNVSDIVKYSSVDDH LDILENTLRLRHLAPTAPDTLGCYPFYQKDPFILSECPHVYFSGNAPSYQSKRITGSEGQ EVLLVTIPEFSSTQTACLVNLRTLECEPIRFSAFSTEDEEESEMNVSH NT seq 1407 nt NT seq  +upstreamnt  +downstreamnt atgttctcagatgcggtggagtcgaaggagacgctgctccgccctccgagctccgacggg acgctgttcgagagacaggagctgctgtcgtactccagctgctcggagcgtttccggctc ggcgagcgcagcttcagccgtcagtacgctcacatctacgccactcgtctcatgcagatg cgggagatcctgagcgagagagcgcagcagaaatggggtccgtcgctgcctatcaggaag ctgtgtgacctgcagacgggagagaggtgtgtggtcgtgggcacgttattcaaacacatg gagctgcagccgtccatcctgaaggagatcagcgaggagcacaacctgctcccgcagcct cctcgggccaaatacatcagccaatcagacgagctcattctagaggacgagctgcagagg atcagactggaggacaaaatcgaaacggccaagtttgttactggaagtgtgatcgctgtc cttggtgcggagaaaaacgacggtaaatttaccgtggaggatttttgtttggccgatctg ccgcctcagacgccacgagaacctttaaacacagacaggttcgtgctcctggcctcgggg ctggggttgggcagcagtaaggcagagagcatgctgggattgcagctgctggtcgacatg gtgtcgggtcacctgggtgacgagggagagcagagcgccgcggcgtccatctctcgcgtc ctgctggccgggaacctgctgagtcgcagcacacaggataaagactccagcacgaaggcg aagtatctgactaagaagacgcaggcaggaagtgtggaggccatcagactgctggatgag ctgctggttcagctggtggcctccgtagcggtggacgtgatgccaggagaatttgacccc actaactacactttacctcagcagcctctgcacagctgcatgttccctctgtgcggctcg taccgaaccctgcagctcgtcaccaacccttaccaggccgcggtggacggcgtgcgattc ctgggcacttcaggacagaatgtgagtgacattgtgaagtacagcagtgtggatgatcat ctagacattctagagaacacactgcgactccgacatctggctcctactgccccagacacg ctgggttgttacccgttctaccagaaggaccctttcatcctgagcgagtgtcctcatgtg tacttcagtggaaacgctccaagctaccagtccaaacgtatcacaggttctgaaggtcag gaggtgctgctggtgaccatcccagaattcagcagcacacagacggcctgcctcgtgaac ctacgcaccctggagtgcgagccgatcagattttccgccttttccaccgaggatgaagaa gagagcgagatgaatgttagccactaa

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