Tachysurus fulvidraco (yellow catfish): 113642273
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Entry
113642273 CDS
T08119
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113642273 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113642273 (ttc37)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
113642273 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_16
TPR_8
TPR_11
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
ChAPs
ARM_TT21_C
HAT_PRP39_N
Fis1_TPR_C
Retrotran_gag_2
PknG_TPR
DUF7017
Motif
Other DBs
NCBI-GeneID:
113642273
NCBI-ProteinID:
XP_027001415
LinkDB
All DBs
Position
9:complement(12981339..13009700)
Genome browser
AA seq
1589 aa
AA seq
DB search
MTEVWCGACALFSCARKLLCTVKMSNKDVKSALKSARDAIKNKEFKEALKHCKAVLKLEK
NNYNAWVFIGVAASELEQPEQAQTAYRKAAELEPEQLLAWQGLANLYEKSDQADFKAELP
KIYQKLIKLYETSDKVKCFEVSKKLVDIYQTEKNYLQVARVWQHLIQVREAEDGIENFEL
IELWREMIKLLLGSVDQQDNETQQHLLSAFEKALQLTENVPSEAHKQLIQDYIKCLSKLP
HEVMKMKQMCDLMLTLYPKVYYPLEVLAQHYLLLDDCSEEAVGCYTRLLELDAVSSLAHF
GLGKKALQDKKYEDACKSFGLGLKQMRSSNIGWYGLAQAELKMHKYTDSVLSSSQGLKSS
TGFSEDWTHKLMRVKLEALVRAGTDPSVDEALGMLSQMPDANNDPALLVLKVRAYLQKRK
FEEAFQVSSELLSSHPCSVEGLIVKGLTHRAKNEYQQAEQCFTEAVSQRPDCGELYFLLG
QLYWNMGEDTRRDKSKVHTHLLKAAKLDPHLGSVFRYLGHYYREVAKDQGRARGCYKKAF
ELDSTDAEAGAATVDLSMVQGDMDSALAVLQAVTERATPGSAKWAWMRRGLYHLKVGQNA
QAIADLQAALRADREDWVCWECLGEAYLNRHSFTAALKAFAQAHMLQPSSIYSLYQMASI
KQILGRYKEAAVEYQQIIKTEEYVPALKGLGECLLAMAKTAMEDYLDGRAVDLIQEAITY
LFRAVQKRADLSCLWKLLGDACTKCSSVSPNRICVLVPGVLCGTEPSDKPHILDQNELLS
LGERCYGRALKLMPDTPSLWCDLGLNYYHQSRLIWSTSTEQDVQSLLEKALQCVKKAVML
DSGNHMYWNALGVVAMTKGIENFALAQHSFIKSVRTEPNNVVAWTNLGTLYFKKGNIELA
HEAFKIAQSLEPLYVNCWIGQAFIAETVGSYDTMDLFRHTTELSTHTEGVKGYAYWVCST
LLDKTNRDSELYRYNIVQMNAVSAAQVALTKYTERIQTDAEAFVMLGFLNEHMQLKKQAT
GAYKRAVELLQKSPQTEEIRFALRGYARALCDTDQWEEAVRHYSSTSLSELHDLTGMALA
CFRAGRPQESVNAYEKALAVASTEKEKAYILTALALLQHRLGNMDTAKTLLFKCSLLKEP
IPESLLCLCALGLVHGDVTLASAALSELLKLDGALRGAVEEHCLLTCTLLALQGNYSAVQ
REASRAVFRNPGNPSLWALLSRLVPQFCPSKADGGAVAGSVACHASMTLGKRALLYSGIN
QLASGRHSGEDRRTNALKTIQRAILLCPDDPAVWAGLMAACHTENVACALSGSSPCREGL
EKDLMTLVSEKVKSLQREDGLLAQALEGWVLQQTVTGLKQIGHYDEAEALCSQVLSVSPE
HPAVFLLLRQVQCECLLLSDARDCIPSTVLDQLSAAVMANPTSVSAWHWLADVYRSQGLL
AQASVALRQSLQLASQLGHYSGKLSSLLRLALLSLTPCMAGVGGVEWSSLVREACTEVQK
LAPCPVASLFQALLQFSIKMGARETRRLLEKIVYRSGSRDMKTVTAVARWYLLRHLHAKD
DLELIDTLMMDAEAAGDLRLLEFHKQLYP
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagtatggtgtggagcatgcgcgctcttcagttgtgcacggaagctgctgtgc
actgtgaaaatgtcaaataaagacgtaaaatcggctctaaaaagtgccagggacgctata
aaaaacaaggagtttaaagaagctctgaaacactgcaaggctgttctgaagcttgagaag
aataactacaatgcctgggtgtttattggagttgcagcgagtgagctggagcagcccgaa
caggctcagacggcctacaggaaagctgcagagcttgaacctgagcagctgcttgcatgg
cagggccttgcaaacctgtatgaaaaaagtgatcaagctgattttaaagccgagcttcct
aaaatctatcaaaaactcataaaactgtatgaaacctctgataaagtcaaatgctttgaa
gtgagcaagaagttggtggacatttatcagacagaaaagaactacttacaggtggcgagg
gtgtggcagcatctcattcaggtgagagaggcagaggatgggattgagaactttgagctg
atcgaattatggagagaaatgatcaagctgctcttgggctcagtggaccagcaggacaac
gagactcagcaacatctcctgtctgcatttgaaaaagctcttcagctaactgaaaatgtg
cctagtgaggctcataaacaactcatccaggattacattaaatgcctctcaaaactccct
catgaagtaatgaagatgaagcagatgtgtgatctcatgctgaccctttacccaaaagtc
tattatcctctggaagttctagcacagcattatttattattagacgattgcagtgaagaa
gctgtgggctgttatactcgtcttttggagctggatgcggttagttccctggcccacttt
ggtctgggtaaaaaagctctacaggacaagaaatatgaggatgcttgcaagagctttggc
ctgggactgaagcagatgcgctccagtaacattggttggtacggtctcgctcaagctgag
ctgaaaatgcacaaatacactgatagtgttttgtcctccagccaagggctgaagtcgagt
acagggttttctgaagactggacccacaagctgatgagagtaaagctggaggctctggtg
agagctggaacagatcccagtgtagatgaagctctagggatgctttctcagatgccagat
gctaacaatgaccctgctctattagtgttaaaagttagagcctatttacaaaagcggaag
tttgaagaagcttttcaggtgtcttctgagttgctgagctcacatccttgctctgtggaa
ggtttaattgtaaagggactgacacatagagctaaaaacgaataccagcaggcagagcaa
tgttttactgaagctgtgtctcagaggccagactgtggggagttgtacttcctgctggga
cagctttactggaacatgggagaagacacacggagagataagagcaaagtacacactcat
ctgctgaaggctgctaagctggatccccatcttggctctgtgtttcgctacctgggtcac
tactacagggaagtggccaaagaccagggtcgagctagagggtgctacaagaaagcgttt
gagctggactccactgacgctgaggctggcgctgccactgtggacctcagcatggtgcag
ggagacatggactctgctttagcagttcttcaggcagtgacagagagagcaactcctggt
tcagctaaatgggcctggatgaggagaggcctgtatcatctgaaagtgggccagaatgca
caggctattgcagacctgcaggcagcattgcgggctgatcgtgaggactgggtgtgttgg
gagtgtttaggcgaggcctatttgaaccgacacagctttacagctgccctcaaagctttt
gctcaggcccacatgctacagcccagctccatctacagcctctaccagatggcctccatc
aaacagattctgggcaggtacaaagaggcggcagtggagtaccagcagataataaaaact
gaagagtatgtgccagctctgaagggacttggagaatgtcttttggccatggctaaaaca
gcaatggaggattacctggatgggagagcagtagaccttatacaggaagccattacatat
ttgtttagggcagtgcagaagcgtgcagatctgtcatgtctgtggaagttgctgggagat
gcctgtaccaaatgcagttctgtttctcctaaccgaatctgtgtgcttgtgcctggtgtg
ctatgtggaacagagccttcagataagcctcacatactggaccagaatgaactgctcagt
ctcggagagaggtgctatggccgtgctctgaaactgatgccagatacaccgagcctgtgg
tgtgacctgggcctcaactattaccaccagtcgaggttgatttggtccacatctacagaa
caggatgtccagtcactgctggagaaagctctgcagtgtgttaaaaaggcagtcatgctg
gacagtgggaatcacatgtactggaatgcactaggggttgtggctatgaccaaaggaatt
gaaaactttgcccttgcccagcacagtttcattaagtcagtcagaacagagccaaataat
gttgtagcatggacaaaccttggaaccttatattttaagaagggcaacattgagcttgca
cacgaggccttcaagatagctcagtctctggagccgctgtatgtgaactgttggattgga
caggcgttcattgctgagacagtaggaagctatgacaccatggatctcttcagacacacc
actgagctcagcactcatactgaaggagtgaagggttatgcatattgggtctgttctact
ctgctggacaaaactaaccgagactcagaattgtaccgctacaacatagtccagatgaac
gctgtctcggctgcacaggtggccttaaccaaatatacagagagaattcagacagacgct
gaagcctttgtgatgttgggcttcctgaatgagcacatgcaactgaaaaagcaggcaact
ggagcctataagagagctgtggagttgctccagaaaagcccacaaactgaagaaatccgc
tttgctctcagaggctatgctcgggccctctgtgacacggatcagtgggaagaagctgtc
cgtcattattcttccacatctctctcggagctgcatgatctcacaggcatggctctagcc
tgctttcgagcaggacgcccgcaggagagtgttaatgcctatgagaaagctcttgcagta
gcttccacagagaaggagaaagcttatatactaacagctctagctttactacagcaccga
ctggggaacatggacactgccaaaactttactctttaagtgctcgttgctgaaggagcca
attccagagagtttgctatgtttatgtgctttgggcctggtccatggagatgttaccctg
gctagtgctgcactttcagagctgttgaagctggatggtgcattgagaggagctgtggag
gagcactgcctgcttacttgcacccttctagccttacagggcaactacagtgctgtgcag
agagaggcttccagggcagtattcagaaacccaggaaatccgtccctctgggcactgctc
tccagactggtgccacagttctgtcccagcaaagctgatggtggagctgtggcaggtagc
gtggcatgtcatgctagcatgactctaggaaagagggcactgctgtacagtggaataaat
cagttggcctcgggcagacactctggagaagacaggaggacaaatgctctaaagaccatc
cagagagctattctgctctgtccagatgatcctgcagtctgggcagggcttatggctgca
tgtcacacagagaatgtagcctgtgccctgtcaggctcctccccatgcagagagggtcta
gagaaagatcttatgacactggtgtcagagaaagtgaaaagcctgcagagagaggatggg
cttttggctcaggctctggaaggctgggtgctgcagcagactgtgacaggactcaaacag
atcggccactatgatgaagctgaagccctgtgttcacaggtgttgagtgtgtctcccgag
catcctgctgtgttcctgttgctcaggcaggttcagtgtgagtgcctcctcctgtctgat
gccagagactgcatcccctcgacagtactggaccagctgagtgctgctgtcatggccaac
ccaacttcagtgtctgcttggcattggctggcagacgtgtaccgctctcaggggttgctg
gcacaggcctcggtggctctgagacagagtctgcagcttgcctctcagctcggtcactac
agtgggaagctcagcagcctgctgcgactcgccctgctctccctcaccccctgcatggct
ggagttgggggagtggaatggagcagtcttgtacgtgaagcttgtactgaggtacagaag
ctggctccgtgtcccgtggcttcactttttcaggctctgctccagttctccatcaagatg
ggagccagggagacacggcgtctgttggagaagattgtttacagatctggttcaagagac
atgaaaacggtgacagcagttgctcgctggtacctcctacgccacctgcatgccaaagat
gacctagagctgatagataccctgatgatggatgctgaagcagcaggagacttgaggctg
ctggagttccataaacagctgtacccctga
DBGET
integrated database retrieval system
