KEGG   Tachysurus fulvidraco (yellow catfish): 113642790
Entry
113642790         CDS       T08119                                 
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    113642790 (rad54l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113642790 (rad54l)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     113642790 (rad54l)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3 DEAD Rad54_N SWI2_SNF2
Other DBs
NCBI-GeneID: 113642790
NCBI-ProteinID: XP_027002252
LinkDB
Position
5:15333156..15343967
AA seq 743 aa
MRRSFAPSQLAKRKQRVDSDDDDDDEDEDWDPEIKSKRIKDCRESYMSPYRKPLTQLTNR
PVCVDSNEHEAFIRSILSRPFKVPIPNYTGPLGLRALGLKRSGVRKALHDPFEDGALVLY
EPPALGAHDLIKTDKDKLPVHVVVDPVLSKVLRPHQREGVKFLWECVTGRRITDSYGCIM
ADEMGLGKTLQCITLMWTLLRQSPDLRPEIDKAIVVSPSSLVRNWYNEVAKWLGGRVQPV
AIDGGSKDEIDRKLVNFISQQGLRVPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRL
KNSDNQTYQALNAMHSQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFEIPI
LKGRDADASDKERAVGEEKLKELISIVNRCLIRRTSDILSKYLPVKVEQVVCCRLTPLQK
ELYKLFLKQAKPAETLQQGKISVSSLSSITSLKKLCNHPSLIYEKCVEGEEGFAGAMELF
PPGYSTKAVEPQLSGKMLVLDYILAMTRSTTSDKVVLVSNYTQTLDLFEKLCRARKYLYV
RLDGTMSIKKRAKIVEKFNSLSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDE
QAMARVWRDGQRKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLEEL
RELFTLNEDTFSDTHDRFRCQRCVNGRQVRPPPEDSDCTSNLSCWHHCADKRGLKDAVLQ
ASWDKAVTFVFHQNSHHDQRGVV
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgagaagaagctttgcgcccagtcagcttgccaaaagaaagcagagagtcgattctgat
gatgacgatgatgatgaagatgaagactgggatcctgaaattaaaagcaaaaggattaaa
gactgcagagaaagctacatgtctccatataggaagcctctgacccagctcacaaaccgg
cctgtgtgtgtggacagcaacgagcatgaggcttttatacgaagtatcctttccagacca
ttcaaggttcccatccctaattacacaggtccactgggtttgagagctctgggcttgaag
aggtcaggtgttagaaaggctctccatgatccttttgaagatggagctctggttctttat
gagccgccagctttgggcgctcatgacctcatcaaaacagacaaggacaagcttcctgtg
cacgttgtggtggatccggtgcttagtaaagttcttcgaccccatcagagggagggtgtg
aagtttctgtgggagtgtgtgactgggcgccgtatcaccgactcctatggctgcatcatg
gctgatgagatgggactggggaagacactgcagtgcattacgctcatgtggactctcctc
aggcagagtcctgatctcagacctgagattgataaggccattgtggtctcaccatccagc
ctagtaagaaactggtataatgaagtcgctaagtggcttggaggacgtgtgcagcctgtg
gctattgatggtggctccaaggatgagatagacagaaagcttgtgaacttcatttcccag
caaggtctacgagttcccactcccattctgattatttcatatgaaacgttccgtctccac
gctgaagttctgcacaaaggcaaagtaggattggtcatttgtgatgagggtcacaggctg
aaaaactcggacaatcagacgtaccaggctctgaatgcgatgcattcccagcgcagagtc
ttgatttctggcactcccattcagaacgatctgcttgagtacttcagcctggtgcacttt
gtcaatgctggcatcctcggcacagctcaggaatttaaaaagcgctttgagattcccatt
ctgaagggccgtgatgcagatgctagcgataaagagcgagccgtcggggaagagaagcta
aaagagctcatcagcattgttaacaggtgtctgatcagaaggacctctgacattctgtct
aagtatcttcctgtgaaggttgagcaagtcgtttgctgcagactaactcctctgcagaag
gaactctataagctgttcctgaagcaggcaaagccagcagagacgctacagcagggcaaa
atcagtgtttcctcactgtcctctatcacctcactcaaaaagctgtgcaaccacccctca
ctgatctatgagaagtgtgtggagggggaggagggctttgctggggcaatggagcttttc
ccacctggttactcaactaaagctgttgaacctcagctttcagggaagatgctggtgctc
gactacattcttgctatgacacggtcaacaaccagcgataaagtggtgcttgtgtcaaac
tacacacagactctggacctgtttgagaagctgtgtcgtgctcgcaaatatctgtatgtg
agactggatggaacaatgtctatcaaaaagagagccaagattgttgaaaaatttaacagt
ctttctagcccagagttcatcttcatgttgagtagcaaggccggtggctgcggcctgaac
cttattggggcaaatcggttggtaatgttcgacccagactggaatccagccaatgatgaa
caggcgatggcgagagtgtggcgtgatggccagagaaaaacgtgctacatctacagactg
ctctcaacagggactatagaggagaagatcctacagaggcaggctcataagaaggcactg
agcagctgtgtggtggatgaggagcaggacgtagagagacatttttctctggaggagctg
agggagctgttcactctcaatgaggacacattcagcgacacacacgacaggtttcgatgt
cagcgctgtgtaaacgggcgtcaggttcgtcctcctcccgaggattcggactgcacaagc
aacctgtcgtgctggcatcactgtgcagataaacgagggctgaaggacgcagtactccag
gcctcctgggacaaagctgtgacctttgtcttccaccagaattcccaccatgaccaaaga
ggagtcgtctga

KEGG   Tachysurus fulvidraco (yellow catfish): 113659528
Entry
113659528         CDS       T08119                                 
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
  KO
K10877  DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    113659528 (rad54b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113659528 (rad54b)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     113659528 (rad54b)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 SWI2_SNF2 AAA_34
Other DBs
NCBI-GeneID: 113659528
NCBI-ProteinID: XP_027028166
LinkDB
Position
25:7636839..7661124
AA seq 905 aa
MRRSAAPSQLLQGNAAKKPRFVPPAAPVHTGAVSTLGPTSAPGNVLNKVQRNLSERTGDT
PAVVGASSAGRALARVLSAVAKEERKENSLECLSCPLGSVQLPDSPQQSSHTTVMPTARY
YSVMWCKASSRKHKRWEGDAVLVASGRSVVLKDMEGKDIGRGSGYKASELESLCEGQTLM
VGGKQIEVMGVISDDDYAKGRCFQDAIVEFPLEITKAPVRHQRPQLSKPFARPALKDATL
RVSEPEGPVCKPRHDPNSPGALVMPRPSANHQWLCNKNGLTLVDVVVDPHLTNHLRPHQR
EGVVFLYECIMGMRLAGRCGAILADEMGLGKTLQCVCVLWTLLRQGPYGGRPVLNRALVV
CPGSLVKNWAIEFNKWLGRERISVYTVDQDNRVEDFISCPRSPVMVISYEMLLRSVETLK
KLEFGLVICDEGHRLKNSNIKTASALTALACERRVILTGTPVQNDLHEFYSIIEFVNPGI
LGTSAAYRKIYEEPILKSRQPTCTEEERCIGEERAAELARLTSAFTLRRTQEIINCFLPG
RLEWTVFCRPTELQVQLYNELLSSRPVKACFAASSAHTFTHSPHLACINALKKLCNHPGL
LYNTIKEKKTDHLYDSISIDLFPETYTTGGFCTGDSGKLLVLTDLLAAIQHVNCTDKVVL
VSNYTQTLDLLQDLCVHLGYTWCRLDGQTPVAQRQRIVDSFNHPHSSHFLFLLSSKAGGV
GLNLVGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRFLTTGTIEEKIYQRQVSK
QGLSGAVVDLGKKGEHINFSAEDLRDLFTFDSNTDCLTHDLLDCKCSGDGRMPGVTEEVA
PGRACQLGRRGKGASVPQRVSMSELMQWKHYSGTIASYGDVYLDHAHNHITYAFQSTTSK
TQDIT
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgcgcaggtctgcggcaccaagtcagctgctccagggcaatgcagcaaagaagccacga
tttgtacctcctgctgcaccggtacacactggtgcagtgtccaccttaggaccaacatca
gcacctggaaatgtccttaacaaggtgcagaggaacttgtctgagaggactggagacact
ccagctgttgtcggagcctcttcagcgggtagggctttagccagggttctgagtgccgtc
gctaaggaagagaggaaagaaaatagcctggagtgtctcagctgtcccctgggatcagtg
cagctcccggattctccccaacagtcatcacacaccactgtcatgccaacagcccggtac
tacagcgtaatgtggtgcaaggcatcctccaggaagcataagcgctgggaaggtgacgct
gtgctcgtggcttcaggacgcagtgttgtcctcaaagacatggaggggaaagatattgga
cgagggtcaggttacaaagcatctgagctggagagtctgtgcgagggccaaactttaatg
gtaggagggaagcagattgaggtcatgggggtcatctcggatgatgactatgctaaggga
cgatgttttcaagatgccattgtggagtttcctttagagattactaaagcaccagtgaga
catcagagacctcagctctccaaaccctttgccagaccagcactaaaggatgcaactctg
agagtgtctgaacctgaggggcctgtctgcaagccaagacatgatcctaatagtccagga
gctcttgtgatgcctcggccttcagccaatcaccagtggctttgtaataaaaatggactc
acgttagtggatgtggttgtggaccctcatctaacaaaccacctgcgaccacatcagagg
gagggtgtggtcttcctatatgaatgcatcatgggaatgaggttggctggccgttgtgga
gccattttagcagatgagatgggtttggggaagacactgcaatgtgtgtgtgtcttgtgg
actttactgaggcaggggccttatggtgggcggcctgtgctgaatagagcattggtggtt
tgccccggtagtctggtgaaaaactgggctattgaattcaataaatggcttggcagagag
aggatcagcgtttacactgttgaccaggacaaccgtgtggaggactttatatcctgtccc
cggtctcctgtaatggtaattagttatgagatgttactgcgctctgtagaaaccttaaag
aagctggagtttggtctggtcatctgtgatgagggccatcggcttaaaaacagcaatatt
aaaacagccagtgctctcactgccctggcctgcgaacgtcgggtaattcttacaggtacc
cctgttcagaatgacctccatgagttctactccatcattgagtttgtaaatccaggcatt
ttgggaacttcagcggcttacagaaagatttatgaagaaccgatcctcaaatcccgccag
cccacctgcaccgaggaggaaaggtgcataggtgaagagcgagcagcagaacttgctcgg
ctgaccagcgcatttacgctgcgcaggactcaagagatcatcaactgtttcttacctggg
cgactggaatggacggtgttctgtaggcccacagagctgcaggtgcagctgtacaacgag
ctgctctctagccgacctgtcaaggcgtgtttcgctgcctccagcgcacacacgtttaca
cacagccctcaccttgcctgcattaatgctttgaagaaactatgcaaccaccctgggctt
ctttacaacacaataaaggagaaaaagactgatcatttgtatgacagcatttctatagac
ctttttcctgagacctacaccactggaggtttttgcacaggagactctgggaaattgctg
gtgctcacagaccttttggctgctatacaacatgtcaactgcacagacaaggttgtgtta
gtgtctaattatacacagacacttgatctgctgcaagacctctgtgttcaccttggttac
acctggtgtcgactcgatggacagacacctgttgcccagcgacaacgaattgtagactcc
tttaaccatccacactcctcccacttcctattcctgctcagttcaaaggctggaggagtg
gggcttaatcttgttggtgcctcccatctggttttgtacgatatagactggaacccagcc
aatgacatacaggccatggcccgagtatggagagatgggcagaagaaaacagttcacatc
tacagatttctaacaacaggtaccatagaagaaaagatctatcagagacaggtgagtaag
cagggactttctggagccgtggtagacctggggaaaaagggtgagcacatcaacttctca
gccgaggatctgcgtgacctttttacctttgactctaataccgattgcctcactcatgac
ctgctggactgcaagtgctcaggggatggaagaatgccaggtgtgactgaggaagtggct
ccaggaagggcgtgccagttgggtcgccgtggcaaaggtgccagtgttccacagcgggtc
agcatgtctgagcttatgcagtggaagcattattctggaaccattgcatcatatggtgat
gtttacttggaccatgcacacaatcatatcacatatgccttccagagcactacttccaaa
acccaagatataacgtaa

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