Tachysurus fulvidraco (yellow catfish): 113642790
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Entry
113642790 CDS
T08119
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113642790 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113642790 (rad54l)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113642790 (rad54l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
113642790
NCBI-ProteinID:
XP_027002252
LinkDB
All DBs
Position
5:15333156..15343967
Genome browser
AA seq
743 aa
AA seq
DB search
MRRSFAPSQLAKRKQRVDSDDDDDDEDEDWDPEIKSKRIKDCRESYMSPYRKPLTQLTNR
PVCVDSNEHEAFIRSILSRPFKVPIPNYTGPLGLRALGLKRSGVRKALHDPFEDGALVLY
EPPALGAHDLIKTDKDKLPVHVVVDPVLSKVLRPHQREGVKFLWECVTGRRITDSYGCIM
ADEMGLGKTLQCITLMWTLLRQSPDLRPEIDKAIVVSPSSLVRNWYNEVAKWLGGRVQPV
AIDGGSKDEIDRKLVNFISQQGLRVPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRL
KNSDNQTYQALNAMHSQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFEIPI
LKGRDADASDKERAVGEEKLKELISIVNRCLIRRTSDILSKYLPVKVEQVVCCRLTPLQK
ELYKLFLKQAKPAETLQQGKISVSSLSSITSLKKLCNHPSLIYEKCVEGEEGFAGAMELF
PPGYSTKAVEPQLSGKMLVLDYILAMTRSTTSDKVVLVSNYTQTLDLFEKLCRARKYLYV
RLDGTMSIKKRAKIVEKFNSLSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDE
QAMARVWRDGQRKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLEEL
RELFTLNEDTFSDTHDRFRCQRCVNGRQVRPPPEDSDCTSNLSCWHHCADKRGLKDAVLQ
ASWDKAVTFVFHQNSHHDQRGVV
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagctttgcgcccagtcagcttgccaaaagaaagcagagagtcgattctgat
gatgacgatgatgatgaagatgaagactgggatcctgaaattaaaagcaaaaggattaaa
gactgcagagaaagctacatgtctccatataggaagcctctgacccagctcacaaaccgg
cctgtgtgtgtggacagcaacgagcatgaggcttttatacgaagtatcctttccagacca
ttcaaggttcccatccctaattacacaggtccactgggtttgagagctctgggcttgaag
aggtcaggtgttagaaaggctctccatgatccttttgaagatggagctctggttctttat
gagccgccagctttgggcgctcatgacctcatcaaaacagacaaggacaagcttcctgtg
cacgttgtggtggatccggtgcttagtaaagttcttcgaccccatcagagggagggtgtg
aagtttctgtgggagtgtgtgactgggcgccgtatcaccgactcctatggctgcatcatg
gctgatgagatgggactggggaagacactgcagtgcattacgctcatgtggactctcctc
aggcagagtcctgatctcagacctgagattgataaggccattgtggtctcaccatccagc
ctagtaagaaactggtataatgaagtcgctaagtggcttggaggacgtgtgcagcctgtg
gctattgatggtggctccaaggatgagatagacagaaagcttgtgaacttcatttcccag
caaggtctacgagttcccactcccattctgattatttcatatgaaacgttccgtctccac
gctgaagttctgcacaaaggcaaagtaggattggtcatttgtgatgagggtcacaggctg
aaaaactcggacaatcagacgtaccaggctctgaatgcgatgcattcccagcgcagagtc
ttgatttctggcactcccattcagaacgatctgcttgagtacttcagcctggtgcacttt
gtcaatgctggcatcctcggcacagctcaggaatttaaaaagcgctttgagattcccatt
ctgaagggccgtgatgcagatgctagcgataaagagcgagccgtcggggaagagaagcta
aaagagctcatcagcattgttaacaggtgtctgatcagaaggacctctgacattctgtct
aagtatcttcctgtgaaggttgagcaagtcgtttgctgcagactaactcctctgcagaag
gaactctataagctgttcctgaagcaggcaaagccagcagagacgctacagcagggcaaa
atcagtgtttcctcactgtcctctatcacctcactcaaaaagctgtgcaaccacccctca
ctgatctatgagaagtgtgtggagggggaggagggctttgctggggcaatggagcttttc
ccacctggttactcaactaaagctgttgaacctcagctttcagggaagatgctggtgctc
gactacattcttgctatgacacggtcaacaaccagcgataaagtggtgcttgtgtcaaac
tacacacagactctggacctgtttgagaagctgtgtcgtgctcgcaaatatctgtatgtg
agactggatggaacaatgtctatcaaaaagagagccaagattgttgaaaaatttaacagt
ctttctagcccagagttcatcttcatgttgagtagcaaggccggtggctgcggcctgaac
cttattggggcaaatcggttggtaatgttcgacccagactggaatccagccaatgatgaa
caggcgatggcgagagtgtggcgtgatggccagagaaaaacgtgctacatctacagactg
ctctcaacagggactatagaggagaagatcctacagaggcaggctcataagaaggcactg
agcagctgtgtggtggatgaggagcaggacgtagagagacatttttctctggaggagctg
agggagctgttcactctcaatgaggacacattcagcgacacacacgacaggtttcgatgt
cagcgctgtgtaaacgggcgtcaggttcgtcctcctcccgaggattcggactgcacaagc
aacctgtcgtgctggcatcactgtgcagataaacgagggctgaaggacgcagtactccag
gcctcctgggacaaagctgtgacctttgtcttccaccagaattcccaccatgaccaaaga
ggagtcgtctga
Tachysurus fulvidraco (yellow catfish): 113659528
Help
Entry
113659528 CDS
T08119
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113659528 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113659528 (rad54b)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113659528 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
AAA_34
Motif
Other DBs
NCBI-GeneID:
113659528
NCBI-ProteinID:
XP_027028166
LinkDB
All DBs
Position
25:7636839..7661124
Genome browser
AA seq
905 aa
AA seq
DB search
MRRSAAPSQLLQGNAAKKPRFVPPAAPVHTGAVSTLGPTSAPGNVLNKVQRNLSERTGDT
PAVVGASSAGRALARVLSAVAKEERKENSLECLSCPLGSVQLPDSPQQSSHTTVMPTARY
YSVMWCKASSRKHKRWEGDAVLVASGRSVVLKDMEGKDIGRGSGYKASELESLCEGQTLM
VGGKQIEVMGVISDDDYAKGRCFQDAIVEFPLEITKAPVRHQRPQLSKPFARPALKDATL
RVSEPEGPVCKPRHDPNSPGALVMPRPSANHQWLCNKNGLTLVDVVVDPHLTNHLRPHQR
EGVVFLYECIMGMRLAGRCGAILADEMGLGKTLQCVCVLWTLLRQGPYGGRPVLNRALVV
CPGSLVKNWAIEFNKWLGRERISVYTVDQDNRVEDFISCPRSPVMVISYEMLLRSVETLK
KLEFGLVICDEGHRLKNSNIKTASALTALACERRVILTGTPVQNDLHEFYSIIEFVNPGI
LGTSAAYRKIYEEPILKSRQPTCTEEERCIGEERAAELARLTSAFTLRRTQEIINCFLPG
RLEWTVFCRPTELQVQLYNELLSSRPVKACFAASSAHTFTHSPHLACINALKKLCNHPGL
LYNTIKEKKTDHLYDSISIDLFPETYTTGGFCTGDSGKLLVLTDLLAAIQHVNCTDKVVL
VSNYTQTLDLLQDLCVHLGYTWCRLDGQTPVAQRQRIVDSFNHPHSSHFLFLLSSKAGGV
GLNLVGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRFLTTGTIEEKIYQRQVSK
QGLSGAVVDLGKKGEHINFSAEDLRDLFTFDSNTDCLTHDLLDCKCSGDGRMPGVTEEVA
PGRACQLGRRGKGASVPQRVSMSELMQWKHYSGTIASYGDVYLDHAHNHITYAFQSTTSK
TQDIT
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggtctgcggcaccaagtcagctgctccagggcaatgcagcaaagaagccacga
tttgtacctcctgctgcaccggtacacactggtgcagtgtccaccttaggaccaacatca
gcacctggaaatgtccttaacaaggtgcagaggaacttgtctgagaggactggagacact
ccagctgttgtcggagcctcttcagcgggtagggctttagccagggttctgagtgccgtc
gctaaggaagagaggaaagaaaatagcctggagtgtctcagctgtcccctgggatcagtg
cagctcccggattctccccaacagtcatcacacaccactgtcatgccaacagcccggtac
tacagcgtaatgtggtgcaaggcatcctccaggaagcataagcgctgggaaggtgacgct
gtgctcgtggcttcaggacgcagtgttgtcctcaaagacatggaggggaaagatattgga
cgagggtcaggttacaaagcatctgagctggagagtctgtgcgagggccaaactttaatg
gtaggagggaagcagattgaggtcatgggggtcatctcggatgatgactatgctaaggga
cgatgttttcaagatgccattgtggagtttcctttagagattactaaagcaccagtgaga
catcagagacctcagctctccaaaccctttgccagaccagcactaaaggatgcaactctg
agagtgtctgaacctgaggggcctgtctgcaagccaagacatgatcctaatagtccagga
gctcttgtgatgcctcggccttcagccaatcaccagtggctttgtaataaaaatggactc
acgttagtggatgtggttgtggaccctcatctaacaaaccacctgcgaccacatcagagg
gagggtgtggtcttcctatatgaatgcatcatgggaatgaggttggctggccgttgtgga
gccattttagcagatgagatgggtttggggaagacactgcaatgtgtgtgtgtcttgtgg
actttactgaggcaggggccttatggtgggcggcctgtgctgaatagagcattggtggtt
tgccccggtagtctggtgaaaaactgggctattgaattcaataaatggcttggcagagag
aggatcagcgtttacactgttgaccaggacaaccgtgtggaggactttatatcctgtccc
cggtctcctgtaatggtaattagttatgagatgttactgcgctctgtagaaaccttaaag
aagctggagtttggtctggtcatctgtgatgagggccatcggcttaaaaacagcaatatt
aaaacagccagtgctctcactgccctggcctgcgaacgtcgggtaattcttacaggtacc
cctgttcagaatgacctccatgagttctactccatcattgagtttgtaaatccaggcatt
ttgggaacttcagcggcttacagaaagatttatgaagaaccgatcctcaaatcccgccag
cccacctgcaccgaggaggaaaggtgcataggtgaagagcgagcagcagaacttgctcgg
ctgaccagcgcatttacgctgcgcaggactcaagagatcatcaactgtttcttacctggg
cgactggaatggacggtgttctgtaggcccacagagctgcaggtgcagctgtacaacgag
ctgctctctagccgacctgtcaaggcgtgtttcgctgcctccagcgcacacacgtttaca
cacagccctcaccttgcctgcattaatgctttgaagaaactatgcaaccaccctgggctt
ctttacaacacaataaaggagaaaaagactgatcatttgtatgacagcatttctatagac
ctttttcctgagacctacaccactggaggtttttgcacaggagactctgggaaattgctg
gtgctcacagaccttttggctgctatacaacatgtcaactgcacagacaaggttgtgtta
gtgtctaattatacacagacacttgatctgctgcaagacctctgtgttcaccttggttac
acctggtgtcgactcgatggacagacacctgttgcccagcgacaacgaattgtagactcc
tttaaccatccacactcctcccacttcctattcctgctcagttcaaaggctggaggagtg
gggcttaatcttgttggtgcctcccatctggttttgtacgatatagactggaacccagcc
aatgacatacaggccatggcccgagtatggagagatgggcagaagaaaacagttcacatc
tacagatttctaacaacaggtaccatagaagaaaagatctatcagagacaggtgagtaag
cagggactttctggagccgtggtagacctggggaaaaagggtgagcacatcaacttctca
gccgaggatctgcgtgacctttttacctttgactctaataccgattgcctcactcatgac
ctgctggactgcaagtgctcaggggatggaagaatgccaggtgtgactgaggaagtggct
ccaggaagggcgtgccagttgggtcgccgtggcaaaggtgccagtgttccacagcgggtc
agcatgtctgagcttatgcagtggaagcattattctggaaccattgcatcatatggtgat
gtttacttggaccatgcacacaatcatatcacatatgccttccagagcactacttccaaa
acccaagatataacgtaa
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integrated database retrieval system