KEGG   Tachysurus fulvidraco (yellow catfish): 113643232
Entry
113643232         CDS       T08119                                 
Symbol
usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
  KO
K11832  ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    113643232 (usp1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tfd01002]
    113643232 (usp1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tfd04121]
    113643232 (usp1)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113643232 (usp1)
Enzymes [BR:tfd01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     113643232 (usp1)
Peptidases and inhibitors [BR:tfd01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   113643232 (usp1)
Ubiquitin system [BR:tfd04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    113643232 (usp1)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     113643232 (usp1)
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 113643232
NCBI-ProteinID: XP_027003174
LinkDB
Position
5:10100127..10111094
AA seq 792 aa
MISKIPGVQMEGVAVGVGSPVRKHRLSLKFLQRKETKRALDFTEPQAEEPDTAEPADTTS
CDQEVPLPCASSGSCEKRESFVPFVGLNNLGNTCYLNSILQVLYYCPGFKDAVKTLYRMS
KLKDKQKDDDAKSEKGDSCEDSIPVHMELLHSFQSLISSVEQLQSSFLFNPDKYNEGELA
TPPRRILNTLRQLNPMYEGYLQHDAQEVLQCILAYIQEACDTIKKELKSNPDEKPGESEQ
ITRGETDGLMLTQEEEENSDGLNGKRKSDTEVGNAKKKPKSQSKPKKSDEESRPFTRSKR
KSNSDVAGNSASDQTEVVQKGKEEKEGGSNTEEEKNEGTAKDTNKRKKRAKLNWLKPSGK
QPSIFSKFRSMGRISSSVGDRGDSKDQDTSSSEQPQDKTTPKSEKTIQNQTAPKTEEAEV
QGLDMLKQLFQGQLVLRTRCLECECYTERREDFQDISVPVQEDETSCSEASSEISPDPKP
DQKTLRWAISQFASVERIVGQDKYFCETCHHYTEAERSLLFDKTPDVVTIHLKCFAASGS
EMDPYAGLSKVNTPLLTPLKLSLEEWSTRPSSPHEQHHYRLFAVVMHSGVTINSGHYTTY
VHMMDLHRTKLELQPQEESTEEKDGETKPLKKEVVSLPDYDDGEVSFNVSSKMKNTTNGT
NLSSKAGGKRSTEGVSLLGGQRSISSYEISASKQTASEKPANMAAYASSPVPIGVLKKER
DEVGDGVKEESQVSLNIALQNLLEYEGKWVLFDDSEVRLFEEEEFLHACSPVTCSTSTPY
LLFYKKVSGEMN
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgatcagtaaaataccaggtgtgcagatggagggagttgcagtaggtgtggggagtccg
gtcagaaaacaccgtttatctctaaagttccttcaaaggaaagaaaccaagcgtgcactt
gacttcaccgagcctcaggctgaggaacccgacactgcagaaccagcagacaccacaagt
tgtgatcaggaagtgccattgccttgtgcctcatctggttcctgtgaaaaaagagagagc
tttgtaccttttgttggccttaacaatctgggaaacacctgctaccttaacagcatcctt
caggtattgtactattgccccggttttaaagatgctgttaagacgttatatcggatgtcc
aagttaaaggacaaacagaaagacgatgatgccaaaagtgaaaagggagactcgtgtgaa
gactctatacctgttcacatggaattactgcacagcttccagagtttaatatcttcagtg
gagcagctgcagtcgagtttcctgtttaacccagacaaatataacgaaggagagctggcc
acgcccccacgcagaatactcaatactctcagacagttgaatcctatgtatgagggctat
ctgcagcatgatgctcaggaggtactgcagtgcatccttgcatatatacaggaggcctgt
gacaccattaagaaagaactgaaatccaacccagatgaaaaaccaggagaaagcgagcag
atcacgagaggggaaacagatgggttgatgcttactcaagaggaagaggagaactctgat
ggactgaatgggaagaggaagagtgacacagaagtgggcaatgccaagaagaagcccaag
tcacagagcaaacccaagaaaagcgacgaggaaagcagaccttttacccgctcaaagaga
aaatccaacagtgatgtggctggaaactcagcgagtgaccagacagaggtggtacagaag
ggcaaggaggagaaagagggaggaagcaacacggaggaagagaaaaacgaaggaaccgca
aaggacacaaataaaaggaagaagagggcaaaactgaactggttgaaaccttcagggaag
cagcccagtattttctccaaattccgcagcatgggtcgaatcagctcttctgtgggagac
agaggagacagcaaggaccaggacacaagtagcagtgagcagccccaggacaaaaccact
cccaaaagtgagaagaccatacaaaatcaaaccgcaccaaaaacagaagaagcagaggtc
cagggcttggatatgctgaagcagcttttccaaggtcagctggtgctgaggacacgctgc
ctggagtgcgagtgttacactgaaaggagagaggactttcaagacataagtgtaccagtg
caagaggatgagaccagctgctcagaggccagttcagagatttccccagatcctaagcca
gatcagaagactctgaggtgggctatctctcagtttgcgtcagtggagcggattgttgga
caggataaatatttctgtgagacctgtcatcactacactgaggcagagaggagtcttctg
tttgacaagacgcctgatgttgtcaccattcacctcaagtgttttgcagccagtggctca
gagatggacccctatgcaggactgtcaaaggtgaacacgcctctccttactccccttaaa
ctctccttggaggagtggagcacacggccctcctcgccgcacgagcagcaccattacagg
ctcttcgctgtggtcatgcacagcggagtgaccatcaacagcggccattacaccacctac
gtccacatgatggacctccatcgcacaaagcttgagcttcagcctcaggaggagagcacg
gaagagaaagacggagagacgaaaccactaaaaaaggaagtggtttctttacctgactat
gatgatggtgaggtgtccttcaatgtaagctccaaaatgaagaatacgaccaacggaacg
aatctgtctagcaaagctggaggaaagaggtctacagaaggcgtcagtctactgggaggt
cagagaagcatctcgagctacgagatcagtgccagtaagcagaccgcttcagagaaacct
gctaacatggctgcttatgccagttctcctgtgccgataggtgtgctgaaaaaggagaga
gatgaagtaggagatggtgtgaaagaagagagtcaggtgagcttgaacattgctttacag
aaccttctggaatacgaagggaagtgggtgctgttcgatgactcagaggtgaggctgttt
gaggaagaagagttcctacatgcatgctctcctgtgacctgttccacctccacaccttac
cttctcttctacaagaaggtctccggggaaatgaactga

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