Tachysurus fulvidraco (yellow catfish): 113643232
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Entry
113643232 CDS
T08119
Symbol
usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113643232 (usp1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113643232 (usp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113643232 (usp1)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113643232 (usp1)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113643232 (usp1)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113643232 (usp1)
Ubiquitin system [BR:
tfd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113643232 (usp1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
113643232 (usp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
113643232
NCBI-ProteinID:
XP_027003174
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Position
5:10100127..10111094
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AA seq
792 aa
AA seq
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MISKIPGVQMEGVAVGVGSPVRKHRLSLKFLQRKETKRALDFTEPQAEEPDTAEPADTTS
CDQEVPLPCASSGSCEKRESFVPFVGLNNLGNTCYLNSILQVLYYCPGFKDAVKTLYRMS
KLKDKQKDDDAKSEKGDSCEDSIPVHMELLHSFQSLISSVEQLQSSFLFNPDKYNEGELA
TPPRRILNTLRQLNPMYEGYLQHDAQEVLQCILAYIQEACDTIKKELKSNPDEKPGESEQ
ITRGETDGLMLTQEEEENSDGLNGKRKSDTEVGNAKKKPKSQSKPKKSDEESRPFTRSKR
KSNSDVAGNSASDQTEVVQKGKEEKEGGSNTEEEKNEGTAKDTNKRKKRAKLNWLKPSGK
QPSIFSKFRSMGRISSSVGDRGDSKDQDTSSSEQPQDKTTPKSEKTIQNQTAPKTEEAEV
QGLDMLKQLFQGQLVLRTRCLECECYTERREDFQDISVPVQEDETSCSEASSEISPDPKP
DQKTLRWAISQFASVERIVGQDKYFCETCHHYTEAERSLLFDKTPDVVTIHLKCFAASGS
EMDPYAGLSKVNTPLLTPLKLSLEEWSTRPSSPHEQHHYRLFAVVMHSGVTINSGHYTTY
VHMMDLHRTKLELQPQEESTEEKDGETKPLKKEVVSLPDYDDGEVSFNVSSKMKNTTNGT
NLSSKAGGKRSTEGVSLLGGQRSISSYEISASKQTASEKPANMAAYASSPVPIGVLKKER
DEVGDGVKEESQVSLNIALQNLLEYEGKWVLFDDSEVRLFEEEEFLHACSPVTCSTSTPY
LLFYKKVSGEMN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtaaaataccaggtgtgcagatggagggagttgcagtaggtgtggggagtccg
gtcagaaaacaccgtttatctctaaagttccttcaaaggaaagaaaccaagcgtgcactt
gacttcaccgagcctcaggctgaggaacccgacactgcagaaccagcagacaccacaagt
tgtgatcaggaagtgccattgccttgtgcctcatctggttcctgtgaaaaaagagagagc
tttgtaccttttgttggccttaacaatctgggaaacacctgctaccttaacagcatcctt
caggtattgtactattgccccggttttaaagatgctgttaagacgttatatcggatgtcc
aagttaaaggacaaacagaaagacgatgatgccaaaagtgaaaagggagactcgtgtgaa
gactctatacctgttcacatggaattactgcacagcttccagagtttaatatcttcagtg
gagcagctgcagtcgagtttcctgtttaacccagacaaatataacgaaggagagctggcc
acgcccccacgcagaatactcaatactctcagacagttgaatcctatgtatgagggctat
ctgcagcatgatgctcaggaggtactgcagtgcatccttgcatatatacaggaggcctgt
gacaccattaagaaagaactgaaatccaacccagatgaaaaaccaggagaaagcgagcag
atcacgagaggggaaacagatgggttgatgcttactcaagaggaagaggagaactctgat
ggactgaatgggaagaggaagagtgacacagaagtgggcaatgccaagaagaagcccaag
tcacagagcaaacccaagaaaagcgacgaggaaagcagaccttttacccgctcaaagaga
aaatccaacagtgatgtggctggaaactcagcgagtgaccagacagaggtggtacagaag
ggcaaggaggagaaagagggaggaagcaacacggaggaagagaaaaacgaaggaaccgca
aaggacacaaataaaaggaagaagagggcaaaactgaactggttgaaaccttcagggaag
cagcccagtattttctccaaattccgcagcatgggtcgaatcagctcttctgtgggagac
agaggagacagcaaggaccaggacacaagtagcagtgagcagccccaggacaaaaccact
cccaaaagtgagaagaccatacaaaatcaaaccgcaccaaaaacagaagaagcagaggtc
cagggcttggatatgctgaagcagcttttccaaggtcagctggtgctgaggacacgctgc
ctggagtgcgagtgttacactgaaaggagagaggactttcaagacataagtgtaccagtg
caagaggatgagaccagctgctcagaggccagttcagagatttccccagatcctaagcca
gatcagaagactctgaggtgggctatctctcagtttgcgtcagtggagcggattgttgga
caggataaatatttctgtgagacctgtcatcactacactgaggcagagaggagtcttctg
tttgacaagacgcctgatgttgtcaccattcacctcaagtgttttgcagccagtggctca
gagatggacccctatgcaggactgtcaaaggtgaacacgcctctccttactccccttaaa
ctctccttggaggagtggagcacacggccctcctcgccgcacgagcagcaccattacagg
ctcttcgctgtggtcatgcacagcggagtgaccatcaacagcggccattacaccacctac
gtccacatgatggacctccatcgcacaaagcttgagcttcagcctcaggaggagagcacg
gaagagaaagacggagagacgaaaccactaaaaaaggaagtggtttctttacctgactat
gatgatggtgaggtgtccttcaatgtaagctccaaaatgaagaatacgaccaacggaacg
aatctgtctagcaaagctggaggaaagaggtctacagaaggcgtcagtctactgggaggt
cagagaagcatctcgagctacgagatcagtgccagtaagcagaccgcttcagagaaacct
gctaacatggctgcttatgccagttctcctgtgccgataggtgtgctgaaaaaggagaga
gatgaagtaggagatggtgtgaaagaagagagtcaggtgagcttgaacattgctttacag
aaccttctggaatacgaagggaagtgggtgctgttcgatgactcagaggtgaggctgttt
gaggaagaagagttcctacatgcatgctctcctgtgacctgttccacctccacaccttac
cttctcttctacaagaaggtctccggggaaatgaactga
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